RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 CHD1O14646 1710 aa13.46□□□□□ -0.25
VPS13B-206ENST00000496144 ERICH3Q5RHP9 1530 aa13.44□□□□□ -0.26
VPS13B-206ENST00000496144 PTPRGP23470 1445 aa13.44□□□□□ -0.26
VPS13B-206ENST00000496144 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
VPS13B-206ENST00000496144 TARBP1Q13395 1621 aaKnown RBP13.43□□□□□ -0.26
VPS13B-206ENST00000496144 TOP2BQ02880 1626 aa13.43□□□□□ -0.26
VPS13B-206ENST00000496144 PBRM1Q86U86 1689 aa13.41□□□□□ -0.26
VPS13B-206ENST00000496144 CDK11AQ9UQ88 783 aaPredicted RBP13.41□□□□□ -0.26
VPS13B-206ENST00000496144 GOLGA3Q08378 1498 aa13.39□□□□□ -0.27
VPS13B-206ENST00000496144 TNIKQ9UKE5 1360 aa13.38□□□□□ -0.27
VPS13B-206ENST00000496144 APLP2Q06481 763 aa13.37□□□□□ -0.27
VPS13B-206ENST00000496144 KCNH8Q96L42 1107 aa13.36□□□□□ -0.27
VPS13B-206ENST00000496144 ESF1Q9H501 851 aaKnown RBP13.36□□□□□ -0.27
VPS13B-206ENST00000496144 ADAMTS12P58397 1594 aa13.34□□□□□ -0.27
VPS13B-206ENST00000496144 BIVM-ERCC5R4GMW8 1640 aa13.33□□□□□ -0.28
VPS13B-206ENST00000496144 ARAP1Q96P48 1450 aa13.33□□□□□ -0.28
VPS13B-206ENST00000496144 CUL7Q14999 1698 aa13.33□□□□□ -0.28
VPS13B-206ENST00000496144 ARID4BQ4LE39 1312 aaPredicted RBP13.33□□□□□ -0.28
VPS13B-206ENST00000496144 CSRNP3Q8WYN3 585 aa13.33□□□□□ -0.28
VPS13B-206ENST00000496144 RAPGEF2Q9Y4G8 1499 aa13.32□□□□□ -0.28
VPS13B-206ENST00000496144 P3H3Q8IVL6 736 aa13.31□□□□□ -0.28
VPS13B-206ENST00000496144 KIAA0586Q9BVV6 1533 aa13.31□□□□□ -0.28
VPS13B-206ENST00000496144 EEA1Q15075 1411 aa13.31□□□□□ -0.28
VPS13B-206ENST00000496144 ARID3CA6NKF2 412 aa13.29□□□□□ -0.28
VPS13B-206ENST00000496144 PLEKHD1A6NEE1 506 aa13.29□□□□□ -0.28
VPS13B-206ENST00000496144 PCGF6Q9BYE7 350 aa13.28□□□□□ -0.28
VPS13B-206ENST00000496144 ABCA5Q8WWZ7 1642 aa13.27□□□□□ -0.28
VPS13B-206ENST00000496144 NUP160Q12769 1436 aa13.27□□□□□ -0.29
VPS13B-206ENST00000496144 IGF1RP08069 1367 aa13.26□□□□□ -0.29
VPS13B-206ENST00000496144 KIF21BO75037 1637 aa13.25□□□□□ -0.29
VPS13B-206ENST00000496144 CLASP1Q7Z460 1538 aa13.24□□□□□ -0.29
VPS13B-206ENST00000496144 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
VPS13B-206ENST00000496144 PLB1Q6P1J6 1458 aa13.24□□□□□ -0.29
VPS13B-206ENST00000496144 RUSC2Q8N2Y8 1516 aa13.23□□□□□ -0.29
VPS13B-206ENST00000496144 HRCP23327 699 aa13.23□□□□□ -0.29
VPS13B-206ENST00000496144 TRIM26Q12899 539 aaPredicted RBP13.23□□□□□ -0.29
VPS13B-206ENST00000496144 TEX14Q8IWB6 1497 aa13.22□□□□□ -0.29
VPS13B-206ENST00000496144 UACAQ9BZF9 1416 aa13.19□□□□□ -0.3
VPS13B-206ENST00000496144 PLPPR3Q6T4P5 718 aa13.18□□□□□ -0.3
VPS13B-206ENST00000496144 IQGAP2Q13576 1575 aa13.18□□□□□ -0.3
VPS13B-206ENST00000496144 CEP162Q5TB80 1403 aa13.14□□□□□ -0.31
VPS13B-206ENST00000496144 CLIP1P30622 1438 aa13.11□□□□□ -0.31
VPS13B-206ENST00000496144 ASXL2Q76L83 1435 aa13.06□□□□□ -0.32
VPS13B-206ENST00000496144 ABCC2Q92887 1545 aa13.06□□□□□ -0.32
VPS13B-206ENST00000496144 POGZQ7Z3K3 1410 aa13.05□□□□□ -0.32
VPS13B-206ENST00000496144 ABCC10Q5T3U5 1492 aa13.05□□□□□ -0.32
VPS13B-206ENST00000496144 CD109Q6YHK3 1445 aa13.03□□□□□ -0.32
VPS13B-206ENST00000496144 ZNF777Q9ULD5 760 aaPredicted RBP13.03□□□□□ -0.32
VPS13B-206ENST00000496144 PHLDB1Q86UU1 1377 aa13.03□□□□□ -0.32
VPS13B-206ENST00000496144 KDM6BO15054 1643 aa13.03□□□□□ -0.32
VPS13B-206ENST00000496144 EFCAB2Q5VUJ9 269 aa13.02□□□□□ -0.32
VPS13B-206ENST00000496144 FMN1Q68DA7 1419 aa13□□□□□ -0.33
VPS13B-206ENST00000496144 PRXQ9BXM0 1461 aa12.98□□□□□ -0.33
VPS13B-206ENST00000496144 WDR7Q9Y4E6 1490 aa12.98□□□□□ -0.33
VPS13B-206ENST00000496144 UHRF1BP1LA0JNW5 1464 aa12.98□□□□□ -0.33
VPS13B-206ENST00000496144 MLECQ14165 292 aa12.97□□□□□ -0.33
VPS13B-206ENST00000496144 MAPKBP1O60336 1514 aa12.97□□□□□ -0.33
VPS13B-206ENST00000496144 SHROOM2Q13796 1616 aa12.97□□□□□ -0.33
VPS13B-206ENST00000496144 UGGT2Q9NYU1 1516 aa12.96□□□□□ -0.33
VPS13B-206ENST00000496144 ERCC6L2Q5T890 1561 aa12.93□□□□□ -0.34
VPS13B-206ENST00000496144 KIAA0556O60303 1618 aa12.92□□□□□ -0.34
VPS13B-206ENST00000496144 MTUS2Q5JR59 1369 aa12.9□□□□□ -0.34
VPS13B-206ENST00000496144 CTTNBP2Q8WZ74 1663 aa12.9□□□□□ -0.34
VPS13B-206ENST00000496144 TSPOAP1O95153 1857 aa12.9□□□□□ -0.34
VPS13B-206ENST00000496144 EFCAB5A4FU69 1503 aa12.89□□□□□ -0.35
VPS13B-206ENST00000496144 FHOD3Q2V2M9 1422 aa12.89□□□□□ -0.35
VPS13B-206ENST00000496144 VPS8Q8N3P4 1428 aa12.89□□□□□ -0.35
VPS13B-206ENST00000496144 AKNAQ7Z591 1439 aa12.88□□□□□ -0.35
VPS13B-206ENST00000496144 PPARGC1BQ86YN6 1023 aaKnown RBP12.87□□□□□ -0.35
VPS13B-206ENST00000496144 ZEB1P37275 1124 aaPredicted RBP12.87□□□□□ -0.35
VPS13B-206ENST00000496144 DMRT2Q9Y5R5 561 aa12.86□□□□□ -0.35
VPS13B-206ENST00000496144 EPRSP07814 1512 aaKnown RBP12.86□□□□□ -0.35
VPS13B-206ENST00000496144 TSPY4P0CV99 314 aa12.85□□□□□ -0.35
VPS13B-206ENST00000496144 TSPY10P0CW01 314 aa12.85□□□□□ -0.35
VPS13B-206ENST00000496144 CFDP1Q9UEE9 299 aaPredicted RBP12.85□□□□□ -0.35
VPS13B-206ENST00000496144 CCNB3Q8WWL7 1395 aa12.84□□□□□ -0.35
VPS13B-206ENST00000496144 DENND4BO75064 1496 aaPredicted RBP12.84□□□□□ -0.35
VPS13B-206ENST00000496144 STAG3Q9UJ98 1225 aa12.84□□□□□ -0.35
VPS13B-206ENST00000496144 ADCY10Q96PN6 1610 aa12.84□□□□□ -0.35
VPS13B-206ENST00000496144 DIP2BQ9P265 1576 aa12.82□□□□□ -0.36
VPS13B-206ENST00000496144 KDM5BQ9UGL1 1544 aa12.82□□□□□ -0.36
VPS13B-206ENST00000496144 CCDC18Q5T9S5 1454 aa12.82□□□□□ -0.36
VPS13B-206ENST00000496144 BCANQ96GW7 911 aa12.81□□□□□ -0.36
VPS13B-206ENST00000496144 FANCAO15360 1455 aa12.81□□□□□ -0.36
VPS13B-206ENST00000496144 CFAP74Q9C0B2 1584 aa12.81□□□□□ -0.36
VPS13B-206ENST00000496144 DISP1Q96F81 1524 aa12.81□□□□□ -0.36
VPS13B-206ENST00000496144 GLI2P10070 1586 aa12.8□□□□□ -0.36
VPS13B-206ENST00000496144 HECW1Q76N89 1606 aa12.8□□□□□ -0.36
VPS13B-206ENST00000496144 ZCCHC11Q5TAX3 1644 aaKnown RBP12.79□□□□□ -0.36
VPS13B-206ENST00000496144 RAPGEF6Q8TEU7 1601 aa12.79□□□□□ -0.36
VPS13B-206ENST00000496144 ARHGAP5Q13017 1502 aa12.78□□□□□ -0.36
VPS13B-206ENST00000496144 NEO1Q92859 1461 aa12.77□□□□□ -0.36
VPS13B-206ENST00000496144 SPAG9O60271 1321 aaKnown RBP12.77□□□□□ -0.37
VPS13B-206ENST00000496144 RAPGEF3O95398 923 aa12.77□□□□□ -0.37
VPS13B-206ENST00000496144 ARHGAP35Q9NRY4 1499 aa12.75□□□□□ -0.37
VPS13B-206ENST00000496144 MAGI3Q5TCQ9 1506 aa12.75□□□□□ -0.37
VPS13B-206ENST00000496144 SCAPERQ9BY12 1400 aa12.74□□□□□ -0.37
VPS13B-206ENST00000496144 ADGRL1O94910 1474 aa12.73□□□□□ -0.37
VPS13B-206ENST00000496144 CFAP43Q8NDM7 1665 aa12.73□□□□□ -0.37
VPS13B-206ENST00000496144 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms