RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 RUSC2Q8N2Y8 1516 aa29.53■■■□□ 2.32
CTNS-207ENST00000495445 KIAA0586Q9BVV6 1533 aa29.53■■■□□ 2.32
CTNS-207ENST00000495445 PRG4Q92954 1404 aaPredicted RBP29.53■■■□□ 2.32
CTNS-207ENST00000495445 RAPGEF2Q9Y4G8 1499 aa29.37■■■□□ 2.29
CTNS-207ENST00000495445 TRHP20396 242 aaPredicted RBP29.36■■■□□ 2.29
CTNS-207ENST00000495445 PRXQ9BXM0 1461 aa29.24■■■□□ 2.27
CTNS-207ENST00000495445 IQGAP2Q13576 1575 aa29.24■■■□□ 2.27
CTNS-207ENST00000495445 CARMIL2Q6F5E8 1435 aa29.18■■■□□ 2.26
CTNS-207ENST00000495445 PTPRGP23470 1445 aa29.15■■■□□ 2.26
CTNS-207ENST00000495445 CSRNP3Q8WYN3 585 aa29.15■■■□□ 2.26
CTNS-207ENST00000495445 TNIKQ9UKE5 1360 aa29.14■■■□□ 2.26
CTNS-207ENST00000495445 DISP1Q96F81 1524 aa29.14■■■□□ 2.25
CTNS-207ENST00000495445 UGGT2Q9NYU1 1516 aa29.14■■■□□ 2.25
CTNS-207ENST00000495445 ADCY10Q96PN6 1610 aa29.09■■■□□ 2.25
CTNS-207ENST00000495445 EEA1Q15075 1411 aa29.07■■■□□ 2.24
CTNS-207ENST00000495445 CHIC1Q5VXU3 224 aa29.07■■■□□ 2.24
CTNS-207ENST00000495445 NPM1P06748 294 aaKnown RBP eCLIP29.06■■■□□ 2.24
CTNS-207ENST00000495445 CTTNBP2Q8WZ74 1663 aa29.02■■■□□ 2.24
CTNS-207ENST00000495445 MAPKBP1O60336 1514 aa28.99■■■□□ 2.23
CTNS-207ENST00000495445 TTBK1Q5TCY1 1321 aaPredicted RBP28.97■■■□□ 2.23
CTNS-207ENST00000495445 KIAA0556O60303 1618 aa28.97■■■□□ 2.23
CTNS-207ENST00000495445 UHRF1BP1LA0JNW5 1464 aa28.96■■■□□ 2.23
CTNS-207ENST00000495445 UACAQ9BZF9 1416 aa28.94■■■□□ 2.22
CTNS-207ENST00000495445 ABCC10Q5T3U5 1492 aa28.92■■■□□ 2.22
CTNS-207ENST00000495445 ABCC2Q92887 1545 aa28.91■■■□□ 2.22
CTNS-207ENST00000495445 KIF13AQ9H1H9 1805 aa28.91■■■□□ 2.22
CTNS-207ENST00000495445 GOLGA3Q08378 1498 aa28.91■■■□□ 2.22
CTNS-207ENST00000495445 FAM9AQ8IZU1 332 aaPredicted RBP28.89■■■□□ 2.22
CTNS-207ENST00000495445 FAM69CQ0P6D2 419 aa28.87■■■□□ 2.21
CTNS-207ENST00000495445 KDM5BQ9UGL1 1544 aa28.81■■■□□ 2.2
CTNS-207ENST00000495445 DIP2BQ9P265 1576 aa28.8■■■□□ 2.2
CTNS-207ENST00000495445 ASXL2Q76L83 1435 aa28.76■■■□□ 2.19
CTNS-207ENST00000495445 KIF21BO75037 1637 aa28.76■■■□□ 2.19
CTNS-207ENST00000495445 PLB1Q6P1J6 1458 aa28.75■■■□□ 2.19
CTNS-207ENST00000495445 ABCA8O94911 1581 aa28.72■■■□□ 2.19
CTNS-207ENST00000495445 P3H3Q8IVL6 736 aa28.71■■■□□ 2.19
CTNS-207ENST00000495445 SAMD9Q5K651 1589 aa28.71■■■□□ 2.19
CTNS-207ENST00000495445 ZCCHC11Q5TAX3 1644 aaKnown RBP28.67■■■□□ 2.18
CTNS-207ENST00000495445 GLI2P10070 1586 aa28.64■■■□□ 2.18
CTNS-207ENST00000495445 EPRSP07814 1512 aaKnown RBP28.6■■■□□ 2.17
CTNS-207ENST00000495445 UBTFP17480 764 aaKnown RBP28.55■■■□□ 2.16
CTNS-207ENST00000495445 RANGAP1P46060 587 aaPredicted RBP28.55■■■□□ 2.16
CTNS-207ENST00000495445 WDR7Q9Y4E6 1490 aa28.54■■■□□ 2.16
CTNS-207ENST00000495445 ATP10BO94823 1461 aa28.53■■■□□ 2.16
CTNS-207ENST00000495445 TSPOAP1O95153 1857 aa28.52■■■□□ 2.16
CTNS-207ENST00000495445 FHOD3Q2V2M9 1422 aa28.51■■■□□ 2.15
CTNS-207ENST00000495445 EFCAB5A4FU69 1503 aa28.49■■■□□ 2.15
CTNS-207ENST00000495445 EHMT2Q96KQ7 1210 aa28.49■■■□□ 2.15
CTNS-207ENST00000495445 PPRC1Q5VV67 1664 aaKnown RBP28.47■■■□□ 2.15
CTNS-207ENST00000495445 RAPGEF6Q8TEU7 1601 aa28.46■■■□□ 2.15
CTNS-207ENST00000495445 MAP3K4Q9Y6R4 1608 aa28.46■■■□□ 2.15
CTNS-207ENST00000495445 KCNH8Q96L42 1107 aa28.43■■■□□ 2.14
CTNS-207ENST00000495445 ARID3CA6NKF2 412 aa28.41■■■□□ 2.14
CTNS-207ENST00000495445 NUP153P49790 1475 aaKnown RBP28.4■■■□□ 2.14
CTNS-207ENST00000495445 KDM6BO15054 1643 aa28.38■■■□□ 2.13
CTNS-207ENST00000495445 ARHGAP35Q9NRY4 1499 aa28.36■■■□□ 2.13
CTNS-207ENST00000495445 CD109Q6YHK3 1445 aa28.35■■■□□ 2.13
CTNS-207ENST00000495445 TEX14Q8IWB6 1497 aa28.34■■■□□ 2.13
CTNS-207ENST00000495445 MAGI3Q5TCQ9 1506 aa28.32■■■□□ 2.12
CTNS-207ENST00000495445 CFAP43Q8NDM7 1665 aa28.32■■■□□ 2.12
CTNS-207ENST00000495445 COL17A1Q9UMD9 1497 aaPredicted RBP28.31■■■□□ 2.12
CTNS-207ENST00000495445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.28■■■□□ 2.12
CTNS-207ENST00000495445 HNRNPUL2Q1KMD3 747 aaKnown RBP28.28■■■□□ 2.12
CTNS-207ENST00000495445 FMN1Q68DA7 1419 aa28.26■■■□□ 2.12
CTNS-207ENST00000495445 PLEKHD1A6NEE1 506 aa28.24■■■□□ 2.11
CTNS-207ENST00000495445 ABCA9Q8IUA7 1624 aa28.21■■■□□ 2.11
CTNS-207ENST00000495445 CDK13Q14004 1512 aaKnown RBP28.13■■■□□ 2.09
CTNS-207ENST00000495445 PHLDB1Q86UU1 1377 aa28.12■■■□□ 2.09
CTNS-207ENST00000495445 ARAP3Q8WWN8 1544 aa28.1■■■□□ 2.09
CTNS-207ENST00000495445 ATP1B4Q9UN42 357 aaPredicted RBP28.1■■■□□ 2.09
CTNS-207ENST00000495445 HECW1Q76N89 1606 aa28.1■■■□□ 2.09
CTNS-207ENST00000495445 AEBP2Q6ZN18 517 aaPredicted RBP28.08■■■□□ 2.09
CTNS-207ENST00000495445 CLIP1P30622 1438 aa28.06■■■□□ 2.08
CTNS-207ENST00000495445 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.05■■■□□ 2.08
CTNS-207ENST00000495445 NEO1Q92859 1461 aa28.05■■■□□ 2.08
CTNS-207ENST00000495445 CASKIN1Q8WXD9 1431 aa28.04■■■□□ 2.08
CTNS-207ENST00000495445 CDK11AQ9UQ88 783 aaPredicted RBP28.04■■■□□ 2.08
CTNS-207ENST00000495445 KDM4FA0A1W2PPD8 638 aa28.03■■■□□ 2.08
CTNS-207ENST00000495445 LRRIQ1Q96JM4 1722 aa27.98■■■□□ 2.07
CTNS-207ENST00000495445 TTC37Q6PGP7 1564 aa27.95■■■□□ 2.07
CTNS-207ENST00000495445 TROQ12816 1431 aaPredicted RBP27.94■■■□□ 2.06
CTNS-207ENST00000495445 RAPGEF3O95398 923 aa27.93■■■□□ 2.06
CTNS-207ENST00000495445 PCF11O94913 1555 aaKnown RBP27.93■■■□□ 2.06
CTNS-207ENST00000495445 PLCH2O75038 1416 aa27.92■■■□□ 2.06
CTNS-207ENST00000495445 AKNAQ7Z591 1439 aa27.91■■■□□ 2.06
CTNS-207ENST00000495445 FANCAO15360 1455 aa27.9■■■□□ 2.06
CTNS-207ENST00000495445 CCDC18Q5T9S5 1454 aa27.9■■■□□ 2.06
CTNS-207ENST00000495445 FYCO1Q9BQS8 1478 aa27.9■■■□□ 2.06
CTNS-207ENST00000495445 LOC105371045A0A1W2PR82 267 aa27.87■■■□□ 2.05
CTNS-207ENST00000495445 CEP162Q5TB80 1403 aa27.85■■■□□ 2.05
CTNS-207ENST00000495445 KIF14Q15058 1648 aa27.85■■■□□ 2.05
CTNS-207ENST00000495445 CFAP74Q9C0B2 1584 aa27.84■■■□□ 2.05
CTNS-207ENST00000495445 FRMPD1Q5SYB0 1578 aa27.83■■■□□ 2.05
CTNS-207ENST00000495445 DENND4BO75064 1496 aaPredicted RBP27.83■■■□□ 2.04
CTNS-207ENST00000495445 EFCAB2Q5VUJ9 269 aa27.81■■■□□ 2.04
CTNS-207ENST00000495445 ADGRL1O94910 1474 aa27.81■■■□□ 2.04
CTNS-207ENST00000495445 RICTORQ6R327 1708 aa27.77■■■□□ 2.04
CTNS-207ENST00000495445 MYO5CQ9NQX4 1742 aa27.76■■■□□ 2.03
CTNS-207ENST00000495445 SCAPERQ9BY12 1400 aa27.75■■■□□ 2.03
CTNS-207ENST00000495445 ZMYM4Q5VZL5 1548 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms