RNA–Protein interactions for RNA: ENST00000494872.5

TRIM2-209, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 2,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-209ENST00000494872 ABCA10Q8WWZ4 1543 aa17.15■□□□□ 0.34
TRIM2-209ENST00000494872 FHAD1B1AJZ9 1412 aa17.15■□□□□ 0.34
TRIM2-209ENST00000494872 TOPBP1Q92547 1522 aa17.13■□□□□ 0.33
TRIM2-209ENST00000494872 LRRC9Q6ZRR7 1453 aa17.12■□□□□ 0.33
TRIM2-209ENST00000494872 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
TRIM2-209ENST00000494872 POLA1P09884 1462 aaPredicted RBP17.11■□□□□ 0.33
TRIM2-209ENST00000494872 RAB3GAP2Q9H2M9 1393 aa17.09■□□□□ 0.33
TRIM2-209ENST00000494872 MAPKBP1O60336 1514 aa17.08■□□□□ 0.33
TRIM2-209ENST00000494872 CUL7Q14999 1698 aa17.07■□□□□ 0.32
TRIM2-209ENST00000494872 ITGAEP38570 1179 aa17.07■□□□□ 0.32
TRIM2-209ENST00000494872 CFAP43Q8NDM7 1665 aa17.07■□□□□ 0.32
TRIM2-209ENST00000494872 NESP48681 1621 aa17.06■□□□□ 0.32
TRIM2-209ENST00000494872 EFCAB5A4FU69 1503 aa17.06■□□□□ 0.32
TRIM2-209ENST00000494872 PCF11O94913 1555 aaKnown RBP17.05■□□□□ 0.32
TRIM2-209ENST00000494872 SETD5Q9C0A6 1442 aa17.05■□□□□ 0.32
TRIM2-209ENST00000494872 LAMC3Q9Y6N6 1575 aa17.04■□□□□ 0.32
TRIM2-209ENST00000494872 P3H3Q8IVL6 736 aa17.03■□□□□ 0.32
TRIM2-209ENST00000494872 PHLDB1Q86UU1 1377 aa17.03■□□□□ 0.32
TRIM2-209ENST00000494872 AQRO60306 1485 aaKnown RBP eCLIP17.02■□□□□ 0.32
TRIM2-209ENST00000494872 FYCO1Q9BQS8 1478 aa17.02■□□□□ 0.32
TRIM2-209ENST00000494872 FHOD3Q2V2M9 1422 aa17.01■□□□□ 0.31
TRIM2-209ENST00000494872 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
TRIM2-209ENST00000494872 TIMELESSQ9UNS1 1208 aa17■□□□□ 0.31
TRIM2-209ENST00000494872 CTTNBP2Q8WZ74 1663 aa17■□□□□ 0.31
TRIM2-209ENST00000494872 URB2Q14146 1524 aaKnown RBP16.98■□□□□ 0.31
TRIM2-209ENST00000494872 ATP1B4Q9UN42 357 aaPredicted RBP16.98■□□□□ 0.31
TRIM2-209ENST00000494872 WDR97A6NE52 1622 aa16.98■□□□□ 0.31
TRIM2-209ENST00000494872 FAM50AQ14320 339 aaKnown RBP16.96■□□□□ 0.31
TRIM2-209ENST00000494872 FMN1Q68DA7 1419 aa16.95■□□□□ 0.3
TRIM2-209ENST00000494872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.95■□□□□ 0.3
TRIM2-209ENST00000494872 TSHZ2Q9NRE2 1034 aa16.94■□□□□ 0.3
TRIM2-209ENST00000494872 PDS5BQ9NTI5 1447 aa16.93■□□□□ 0.3
TRIM2-209ENST00000494872 ABCA5Q8WWZ7 1642 aa16.93■□□□□ 0.3
TRIM2-209ENST00000494872 GAPVD1Q14C86 1478 aa16.9■□□□□ 0.3
TRIM2-209ENST00000494872 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.29
TRIM2-209ENST00000494872 KCNH8Q96L42 1107 aa16.88■□□□□ 0.29
TRIM2-209ENST00000494872 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
TRIM2-209ENST00000494872 SAMD9Q5K651 1589 aa16.88■□□□□ 0.29
TRIM2-209ENST00000494872 PPP1R15AO75807 674 aaPredicted RBP16.87■□□□□ 0.29
TRIM2-209ENST00000494872 CCER2I3L3R5 266 aa16.85■□□□□ 0.29
TRIM2-209ENST00000494872 DDX10Q13206 875 aaKnown RBP16.85■□□□□ 0.29
TRIM2-209ENST00000494872 SIN3AQ96ST3 1273 aa16.85■□□□□ 0.29
TRIM2-209ENST00000494872 FGD6Q6ZV73 1430 aa16.84■□□□□ 0.29
TRIM2-209ENST00000494872 MTUS2Q5JR59 1369 aa16.82■□□□□ 0.28
TRIM2-209ENST00000494872 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
TRIM2-209ENST00000494872 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
TRIM2-209ENST00000494872 ANP32EQ9BTT0 268 aa16.8■□□□□ 0.28
TRIM2-209ENST00000494872 KIF21AQ7Z4S6 1674 aa16.79■□□□□ 0.28
TRIM2-209ENST00000494872 TARBP1Q13395 1621 aaKnown RBP16.79■□□□□ 0.28
TRIM2-209ENST00000494872 ANP32CO43423 234 aa16.77■□□□□ 0.28
TRIM2-209ENST00000494872 FKBP8Q14318 412 aa16.77■□□□□ 0.28
TRIM2-209ENST00000494872 NEFLP07196 543 aa16.76■□□□□ 0.27
TRIM2-209ENST00000494872 LRRIQ1Q96JM4 1722 aa16.76■□□□□ 0.27
TRIM2-209ENST00000494872 NCOA2Q15596 1464 aa16.75■□□□□ 0.27
TRIM2-209ENST00000494872 EHBP1L1Q8N3D4 1523 aa16.74■□□□□ 0.27
TRIM2-209ENST00000494872 MYOM3Q5VTT5 1437 aa16.74■□□□□ 0.27
TRIM2-209ENST00000494872 HFM1A2PYH4 1435 aa16.74■□□□□ 0.27
TRIM2-209ENST00000494872 SUPT6HQ7KZ85 1726 aaKnown RBP16.73■□□□□ 0.27
TRIM2-209ENST00000494872 CCDC18Q5T9S5 1454 aa16.72■□□□□ 0.27
TRIM2-209ENST00000494872 TONSLQ96HA7 1378 aa16.72■□□□□ 0.27
TRIM2-209ENST00000494872 UACAQ9BZF9 1416 aa16.71■□□□□ 0.27
TRIM2-209ENST00000494872 PTPRKQ15262 1439 aa16.71■□□□□ 0.27
TRIM2-209ENST00000494872 BCANQ96GW7 911 aa16.7■□□□□ 0.26
TRIM2-209ENST00000494872 PTPN23Q9H3S7 1636 aa16.7■□□□□ 0.26
TRIM2-209ENST00000494872 PBRM1Q86U86 1689 aa16.7■□□□□ 0.26
TRIM2-209ENST00000494872 UGGT2Q9NYU1 1516 aa16.69■□□□□ 0.26
TRIM2-209ENST00000494872 ARHGEF11O15085 1522 aa16.69■□□□□ 0.26
TRIM2-209ENST00000494872 NAIPQ13075 1403 aa16.67■□□□□ 0.26
TRIM2-209ENST00000494872 HECW1Q76N89 1606 aa16.66■□□□□ 0.26
TRIM2-209ENST00000494872 MRC2Q9UBG0 1479 aa16.66■□□□□ 0.26
TRIM2-209ENST00000494872 ADAMTS12P58397 1594 aa16.66■□□□□ 0.26
TRIM2-209ENST00000494872 IQGAP2Q13576 1575 aa16.66■□□□□ 0.26
TRIM2-209ENST00000494872 MAGI3Q5TCQ9 1506 aa16.64■□□□□ 0.25
TRIM2-209ENST00000494872 TCOF1Q13428 1488 aaKnown RBP16.64■□□□□ 0.25
TRIM2-209ENST00000494872 HIRIP3Q9BW71 556 aaPredicted RBP16.64■□□□□ 0.25
TRIM2-209ENST00000494872 TRIM52Q96A61 297 aa16.63■□□□□ 0.25
TRIM2-209ENST00000494872 EPRSP07814 1512 aaKnown RBP16.61■□□□□ 0.25
TRIM2-209ENST00000494872 RBM19Q9Y4C8 960 aaKnown RBP16.6■□□□□ 0.25
TRIM2-209ENST00000494872 KDM5BQ9UGL1 1544 aa16.59■□□□□ 0.25
TRIM2-209ENST00000494872 IFT140Q96RY7 1462 aa16.58■□□□□ 0.24
TRIM2-209ENST00000494872 MIA2Q96PC5 1412 aa16.58■□□□□ 0.24
TRIM2-209ENST00000494872 WDR62O43379 1518 aa16.57■□□□□ 0.24
TRIM2-209ENST00000494872 AKNAQ7Z591 1439 aa16.57■□□□□ 0.24
TRIM2-209ENST00000494872 GCC2Q8IWJ2 1684 aa16.55■□□□□ 0.24
TRIM2-209ENST00000494872 CDK13Q14004 1512 aaKnown RBP16.54■□□□□ 0.24
TRIM2-209ENST00000494872 RRP7BPQ9NSQ0 103 aa16.53■□□□□ 0.24
TRIM2-209ENST00000494872 KIAA0586Q9BVV6 1533 aa16.52■□□□□ 0.24
TRIM2-209ENST00000494872 CHIC2Q9UKJ5 165 aa16.51■□□□□ 0.23
TRIM2-209ENST00000494872 ERICH6BQ5W0A0 696 aa16.51■□□□□ 0.23
TRIM2-209ENST00000494872 ZNF608Q9ULD9 1512 aaPredicted RBP16.5■□□□□ 0.23
TRIM2-209ENST00000494872 HNRNPUQ00839 825 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRIM2-209ENST00000494872 KIAA0556O60303 1618 aa16.48■□□□□ 0.23
TRIM2-209ENST00000494872 DISP1Q96F81 1524 aa16.47■□□□□ 0.23
TRIM2-209ENST00000494872 DENND4BO75064 1496 aaPredicted RBP16.46■□□□□ 0.23
TRIM2-209ENST00000494872 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
TRIM2-209ENST00000494872 HSPA5P11021 654 aaKnown RBP16.45■□□□□ 0.22
TRIM2-209ENST00000494872 KDM6BO15054 1643 aa16.45■□□□□ 0.22
TRIM2-209ENST00000494872 ARID3CA6NKF2 412 aa16.45■□□□□ 0.22
TRIM2-209ENST00000494872 MPHOSPH9Q99550 1183 aa16.45■□□□□ 0.22
TRIM2-209ENST00000494872 ROCK1Q13464 1354 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms