RNA–Protein interactions for RNA: ENST00000494872.5

TRIM2-209, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 2,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-209ENST00000494872 NISCHQ9Y2I1 1504 aa24.39■■□□□ 1.5
TRIM2-209ENST00000494872 CCDC180Q9P1Z9 1646 aa20.81■□□□□ 0.92
TRIM2-209ENST00000494872 ZCCHC6Q5VYS8 1495 aaKnown RBP20.63■□□□□ 0.89
TRIM2-209ENST00000494872 SHROOM4Q9ULL8 1493 aa20.6■□□□□ 0.89
TRIM2-209ENST00000494872 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
TRIM2-209ENST00000494872 DCAF1Q9Y4B6 1507 aa20.1■□□□□ 0.81
TRIM2-209ENST00000494872 DCAF8L2P0C7V8 631 aa20.08■□□□□ 0.81
TRIM2-209ENST00000494872 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.77
TRIM2-209ENST00000494872 MYO15BQ96JP2 1530 aa19.79■□□□□ 0.76
TRIM2-209ENST00000494872 HRCP23327 699 aa19.74■□□□□ 0.75
TRIM2-209ENST00000494872 ABCC9O60706 1549 aa19.45■□□□□ 0.7
TRIM2-209ENST00000494872 PCGF6Q9BYE7 350 aa19.44■□□□□ 0.7
TRIM2-209ENST00000494872 SCRIBQ14160 1630 aa19.38■□□□□ 0.69
TRIM2-209ENST00000494872 RSF1Q96T23 1441 aaPredicted RBP19.26■□□□□ 0.67
TRIM2-209ENST00000494872 NACADO15069 1562 aa19.25■□□□□ 0.67
TRIM2-209ENST00000494872 LOC105371045A0A1W2PR82 267 aa19.16■□□□□ 0.66
TRIM2-209ENST00000494872 PPARGC1BQ86YN6 1023 aaKnown RBP19.13■□□□□ 0.65
TRIM2-209ENST00000494872 TRIM26Q12899 539 aaPredicted RBP19.12■□□□□ 0.65
TRIM2-209ENST00000494872 RB1CC1Q8TDY2 1594 aa19.08■□□□□ 0.65
TRIM2-209ENST00000494872 CECR2Q9BXF3 1484 aa18.96■□□□□ 0.63
TRIM2-209ENST00000494872 MROH2BQ7Z745 1585 aa18.91■□□□□ 0.62
TRIM2-209ENST00000494872 ZEB1P37275 1124 aaPredicted RBP18.91■□□□□ 0.62
TRIM2-209ENST00000494872 TRIM41Q8WV44 630 aa18.91■□□□□ 0.62
TRIM2-209ENST00000494872 WIZO95785 1651 aa18.8■□□□□ 0.6
TRIM2-209ENST00000494872 BAZ1AQ9NRL2 1556 aaPredicted RBP18.75■□□□□ 0.59
TRIM2-209ENST00000494872 FAM9AQ8IZU1 332 aaPredicted RBP18.66■□□□□ 0.58
TRIM2-209ENST00000494872 EIF4G1Q04637 1599 aaKnown RBP18.58■□□□□ 0.56
TRIM2-209ENST00000494872 TOP2AP11388 1531 aaKnown RBP18.57■□□□□ 0.56
TRIM2-209ENST00000494872 SMARCA4P51532 1647 aa18.57■□□□□ 0.56
TRIM2-209ENST00000494872 UNC13AQ9UPW8 1703 aa18.56■□□□□ 0.56
TRIM2-209ENST00000494872 PELP1Q8IZL8 1130 aaKnown RBP18.47■□□□□ 0.55
TRIM2-209ENST00000494872 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.55
TRIM2-209ENST00000494872 SMARCA2P51531 1590 aa18.44■□□□□ 0.54
TRIM2-209ENST00000494872 EHMT2Q96KQ7 1210 aa18.42■□□□□ 0.54
TRIM2-209ENST00000494872 BICRAQ9NZM4 1560 aa18.36■□□□□ 0.53
TRIM2-209ENST00000494872 ABCC8Q09428 1581 aa18.33■□□□□ 0.53
TRIM2-209ENST00000494872 SCAF1Q9H7N4 1312 aaKnown RBP18.31■□□□□ 0.52
TRIM2-209ENST00000494872 PABPN1Q86U42 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
TRIM2-209ENST00000494872 PEG3Q9GZU2 1588 aa18.27■□□□□ 0.51
TRIM2-209ENST00000494872 WRNQ14191 1432 aaPredicted RBP eCLIP18.25■□□□□ 0.51
TRIM2-209ENST00000494872 EEA1Q15075 1411 aa18.21■□□□□ 0.51
TRIM2-209ENST00000494872 CCER1Q8TC90 406 aaPredicted RBP18.21■□□□□ 0.5
TRIM2-209ENST00000494872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.18■□□□□ 0.5
TRIM2-209ENST00000494872 SOGA1O94964 1423 aa18.18■□□□□ 0.5
TRIM2-209ENST00000494872 TNIKQ9UKE5 1360 aa18.14■□□□□ 0.49
TRIM2-209ENST00000494872 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
TRIM2-209ENST00000494872 CEP162Q5TB80 1403 aa18.11■□□□□ 0.49
TRIM2-209ENST00000494872 ATAD2BQ9ULI0 1458 aa18.1■□□□□ 0.49
TRIM2-209ENST00000494872 ACIN1Q9UKV3 1341 aaKnown RBP18.1■□□□□ 0.49
TRIM2-209ENST00000494872 RUSC2Q8N2Y8 1516 aa18.07■□□□□ 0.48
TRIM2-209ENST00000494872 BAZ1BQ9UIG0 1483 aaKnown RBP18.05■□□□□ 0.48
TRIM2-209ENST00000494872 DIEXFQ68CQ4 756 aaKnown RBP18.03■□□□□ 0.48
TRIM2-209ENST00000494872 GOLGA3Q08378 1498 aa18.03■□□□□ 0.48
TRIM2-209ENST00000494872 CENPBP07199 599 aaPredicted RBP18■□□□□ 0.47
TRIM2-209ENST00000494872 UBTFP17480 764 aaKnown RBP18■□□□□ 0.47
TRIM2-209ENST00000494872 NEUROD1Q13562 356 aa17.99■□□□□ 0.47
TRIM2-209ENST00000494872 SYNJ1O43426 1573 aa17.98■□□□□ 0.47
TRIM2-209ENST00000494872 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
TRIM2-209ENST00000494872 KIF21BO75037 1637 aa17.93■□□□□ 0.46
TRIM2-209ENST00000494872 ZNF316A6NFI3 1004 aaPredicted RBP17.86■□□□□ 0.45
TRIM2-209ENST00000494872 GTF3C3Q9Y5Q9 886 aa17.85■□□□□ 0.45
TRIM2-209ENST00000494872 TTBK1Q5TCY1 1321 aaPredicted RBP17.84■□□□□ 0.45
TRIM2-209ENST00000494872 TOP2BQ02880 1626 aa17.82■□□□□ 0.44
TRIM2-209ENST00000494872 NCAPD3P42695 1498 aa17.8■□□□□ 0.44
TRIM2-209ENST00000494872 HMGXB3Q12766 1538 aa17.79■□□□□ 0.44
TRIM2-209ENST00000494872 CLIP1P30622 1438 aa17.79■□□□□ 0.44
TRIM2-209ENST00000494872 BIVM-ERCC5R4GMW8 1640 aa17.77■□□□□ 0.44
TRIM2-209ENST00000494872 RAPGEF2Q9Y4G8 1499 aa17.75■□□□□ 0.43
TRIM2-209ENST00000494872 VPS8Q8N3P4 1428 aa17.73■□□□□ 0.43
TRIM2-209ENST00000494872 MYT1Q01538 1121 aa17.68■□□□□ 0.42
TRIM2-209ENST00000494872 ERICH3Q5RHP9 1530 aa17.65■□□□□ 0.42
TRIM2-209ENST00000494872 APLP2Q06481 763 aa17.64■□□□□ 0.42
TRIM2-209ENST00000494872 PRXQ9BXM0 1461 aa17.63■□□□□ 0.41
TRIM2-209ENST00000494872 CFTRP13569 1480 aa17.62■□□□□ 0.41
TRIM2-209ENST00000494872 CUX1P39880 1505 aa17.62■□□□□ 0.41
TRIM2-209ENST00000494872 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
TRIM2-209ENST00000494872 KIF27Q86VH2 1401 aa17.57■□□□□ 0.4
TRIM2-209ENST00000494872 MIER1Q8N108 512 aa17.57■□□□□ 0.4
TRIM2-209ENST00000494872 CLSPNQ9HAW4 1339 aa17.57■□□□□ 0.4
TRIM2-209ENST00000494872 RANGAP1P46060 587 aaPredicted RBP17.55■□□□□ 0.4
TRIM2-209ENST00000494872 YTHDC1Q96MU7 727 aaKnown RBP17.52■□□□□ 0.39
TRIM2-209ENST00000494872 ARAP1Q96P48 1450 aa17.51■□□□□ 0.39
TRIM2-209ENST00000494872 PRDM2Q13029 1718 aa17.49■□□□□ 0.39
TRIM2-209ENST00000494872 CADPSQ9ULU8 1353 aa17.43■□□□□ 0.38
TRIM2-209ENST00000494872 DHX57Q6P158 1386 aaKnown RBP17.42■□□□□ 0.38
TRIM2-209ENST00000494872 CUX2O14529 1486 aa17.37■□□□□ 0.37
TRIM2-209ENST00000494872 RRBP1Q9P2E9 1410 aaKnown RBP17.37■□□□□ 0.37
TRIM2-209ENST00000494872 IGF1RP08069 1367 aa17.36■□□□□ 0.37
TRIM2-209ENST00000494872 KANK4Q5T7N3 995 aaPredicted RBP17.36■□□□□ 0.37
TRIM2-209ENST00000494872 ARHGAP35Q9NRY4 1499 aa17.36■□□□□ 0.37
TRIM2-209ENST00000494872 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
TRIM2-209ENST00000494872 CC2D2AQ9P2K1 1620 aa17.3■□□□□ 0.36
TRIM2-209ENST00000494872 CARMIL1Q5VZK9 1371 aa17.29■□□□□ 0.36
TRIM2-209ENST00000494872 MAP3K1Q13233 1512 aa17.24■□□□□ 0.35
TRIM2-209ENST00000494872 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
TRIM2-209ENST00000494872 CCNB3Q8WWL7 1395 aa17.23■□□□□ 0.35
TRIM2-209ENST00000494872 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
TRIM2-209ENST00000494872 TIAM1Q13009 1591 aa17.19■□□□□ 0.34
TRIM2-209ENST00000494872 DNMBPQ6XZF7 1577 aa17.19■□□□□ 0.34
TRIM2-209ENST00000494872 SUPT16HQ9Y5B9 1047 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms