RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 KIF13AQ9H1H9 1805 aa16.87■□□□□ 0.29
UBR4-216ENST00000494503 NPM1P06748 294 aaKnown RBP eCLIP16.86■□□□□ 0.29
UBR4-216ENST00000494503 TTBK1Q5TCY1 1321 aaPredicted RBP16.83■□□□□ 0.28
UBR4-216ENST00000494503 KIF27Q86VH2 1401 aa16.83■□□□□ 0.28
UBR4-216ENST00000494503 CUL7Q14999 1698 aa16.82■□□□□ 0.28
UBR4-216ENST00000494503 FAM69CQ0P6D2 419 aa16.8■□□□□ 0.28
UBR4-216ENST00000494503 ADCY10Q96PN6 1610 aa16.78■□□□□ 0.28
UBR4-216ENST00000494503 KIAA0586Q9BVV6 1533 aa16.77■□□□□ 0.28
UBR4-216ENST00000494503 IGF1RP08069 1367 aa16.77■□□□□ 0.27
UBR4-216ENST00000494503 TSPOAP1O95153 1857 aa16.75■□□□□ 0.27
UBR4-216ENST00000494503 MAPKBP1O60336 1514 aa16.73■□□□□ 0.27
UBR4-216ENST00000494503 ABCC10Q5T3U5 1492 aa16.73■□□□□ 0.27
UBR4-216ENST00000494503 DIP2BQ9P265 1576 aa16.72■□□□□ 0.27
UBR4-216ENST00000494503 CARMIL1Q5VZK9 1371 aa16.71■□□□□ 0.27
UBR4-216ENST00000494503 PTPRGP23470 1445 aa16.68■□□□□ 0.26
UBR4-216ENST00000494503 CARMIL2Q6F5E8 1435 aa16.67■□□□□ 0.26
UBR4-216ENST00000494503 KDM6BO15054 1643 aa16.66■□□□□ 0.26
UBR4-216ENST00000494503 IQGAP2Q13576 1575 aa16.65■□□□□ 0.26
UBR4-216ENST00000494503 TNIKQ9UKE5 1360 aa16.62■□□□□ 0.25
UBR4-216ENST00000494503 ABCC2Q92887 1545 aa16.58■□□□□ 0.24
UBR4-216ENST00000494503 RAPGEF2Q9Y4G8 1499 aa16.55■□□□□ 0.24
UBR4-216ENST00000494503 ASXL2Q76L83 1435 aa16.55■□□□□ 0.24
UBR4-216ENST00000494503 PLB1Q6P1J6 1458 aa16.53■□□□□ 0.24
UBR4-216ENST00000494503 UACAQ9BZF9 1416 aa16.53■□□□□ 0.24
UBR4-216ENST00000494503 DISP1Q96F81 1524 aa16.52■□□□□ 0.24
UBR4-216ENST00000494503 CTTNBP2Q8WZ74 1663 aa16.5■□□□□ 0.23
UBR4-216ENST00000494503 UHRF1BP1LA0JNW5 1464 aa16.49■□□□□ 0.23
UBR4-216ENST00000494503 KIAA0556O60303 1618 aa16.49■□□□□ 0.23
UBR4-216ENST00000494503 ZCCHC11Q5TAX3 1644 aaKnown RBP16.48■□□□□ 0.23
UBR4-216ENST00000494503 UGGT2Q9NYU1 1516 aa16.48■□□□□ 0.23
UBR4-216ENST00000494503 PPRC1Q5VV67 1664 aaKnown RBP16.46■□□□□ 0.23
UBR4-216ENST00000494503 GLI2P10070 1586 aa16.46■□□□□ 0.23
UBR4-216ENST00000494503 KDM4FA0A1W2PPD8 638 aa16.44■□□□□ 0.22
UBR4-216ENST00000494503 EPRSP07814 1512 aaKnown RBP16.43■□□□□ 0.22
UBR4-216ENST00000494503 KDM5BQ9UGL1 1544 aa16.43■□□□□ 0.22
UBR4-216ENST00000494503 MAP3K4Q9Y6R4 1608 aa16.41■□□□□ 0.22
UBR4-216ENST00000494503 TEX14Q8IWB6 1497 aa16.41■□□□□ 0.22
UBR4-216ENST00000494503 GOLGA3Q08378 1498 aa16.4■□□□□ 0.22
UBR4-216ENST00000494503 WDR7Q9Y4E6 1490 aa16.37■□□□□ 0.21
UBR4-216ENST00000494503 KCNH8Q96L42 1107 aa16.37■□□□□ 0.21
UBR4-216ENST00000494503 ARID3CA6NKF2 412 aa16.36■□□□□ 0.21
UBR4-216ENST00000494503 ADGRL1O94910 1474 aa16.35■□□□□ 0.21
UBR4-216ENST00000494503 FAM9AQ8IZU1 332 aaPredicted RBP16.35■□□□□ 0.21
UBR4-216ENST00000494503 P3H3Q8IVL6 736 aa16.33■□□□□ 0.2
UBR4-216ENST00000494503 COL17A1Q9UMD9 1497 aaPredicted RBP16.33■□□□□ 0.2
UBR4-216ENST00000494503 ABCA8O94911 1581 aa16.31■□□□□ 0.2
UBR4-216ENST00000494503 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
UBR4-216ENST00000494503 PRXQ9BXM0 1461 aa16.29■□□□□ 0.2
UBR4-216ENST00000494503 CD109Q6YHK3 1445 aa16.29■□□□□ 0.2
UBR4-216ENST00000494503 RANGAP1P46060 587 aaPredicted RBP16.29■□□□□ 0.2
UBR4-216ENST00000494503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.25■□□□□ 0.19
UBR4-216ENST00000494503 HNRNPUL2Q1KMD3 747 aaKnown RBP16.25■□□□□ 0.19
UBR4-216ENST00000494503 MAGI3Q5TCQ9 1506 aa16.23■□□□□ 0.19
UBR4-216ENST00000494503 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
UBR4-216ENST00000494503 KIF21BO75037 1637 aa16.19■□□□□ 0.18
UBR4-216ENST00000494503 RAPGEF6Q8TEU7 1601 aa16.18■□□□□ 0.18
UBR4-216ENST00000494503 HECW2Q9P2P5 1572 aa16.17■□□□□ 0.18
UBR4-216ENST00000494503 ATP10BO94823 1461 aa16.17■□□□□ 0.18
UBR4-216ENST00000494503 SAMD9Q5K651 1589 aa16.17■□□□□ 0.18
UBR4-216ENST00000494503 ABCA9Q8IUA7 1624 aa16.12■□□□□ 0.17
UBR4-216ENST00000494503 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
UBR4-216ENST00000494503 FHOD3Q2V2M9 1422 aa16.11■□□□□ 0.17
UBR4-216ENST00000494503 ILDR1Q86SU0 546 aaPredicted RBP16.1■□□□□ 0.17
UBR4-216ENST00000494503 ARAP3Q8WWN8 1544 aa16.09■□□□□ 0.17
UBR4-216ENST00000494503 RAPGEF3O95398 923 aa16.09■□□□□ 0.17
UBR4-216ENST00000494503 EEA1Q15075 1411 aa16.09■□□□□ 0.17
UBR4-216ENST00000494503 ARID4BQ4LE39 1312 aaPredicted RBP16.08■□□□□ 0.16
UBR4-216ENST00000494503 NUP153P49790 1475 aaKnown RBP16.07■□□□□ 0.16
UBR4-216ENST00000494503 NEO1Q92859 1461 aa16.04■□□□□ 0.16
UBR4-216ENST00000494503 PHLDB1Q86UU1 1377 aa16.04■□□□□ 0.16
UBR4-216ENST00000494503 PLEKHD1A6NEE1 506 aa16.04■□□□□ 0.16
UBR4-216ENST00000494503 ATP1B4Q9UN42 357 aaPredicted RBP16.03■□□□□ 0.16
UBR4-216ENST00000494503 EFCAB5A4FU69 1503 aa16■□□□□ 0.15
UBR4-216ENST00000494503 PLPPR3Q6T4P5 718 aa16■□□□□ 0.15
UBR4-216ENST00000494503 FRMPD1Q5SYB0 1578 aa16■□□□□ 0.15
UBR4-216ENST00000494503 UBTFP17480 764 aaKnown RBP15.99■□□□□ 0.15
UBR4-216ENST00000494503 CFAP74Q9C0B2 1584 aa15.99■□□□□ 0.15
UBR4-216ENST00000494503 ADAMTSL3P82987 1691 aa15.98■□□□□ 0.15
UBR4-216ENST00000494503 FANCAO15360 1455 aa15.97■□□□□ 0.15
UBR4-216ENST00000494503 PTPRMP28827 1452 aa15.97■□□□□ 0.15
UBR4-216ENST00000494503 BCORL1Q5H9F3 1711 aa15.97■□□□□ 0.15
UBR4-216ENST00000494503 TTC37Q6PGP7 1564 aa15.97■□□□□ 0.15
UBR4-216ENST00000494503 CDK13Q14004 1512 aaKnown RBP15.97■□□□□ 0.15
UBR4-216ENST00000494503 MADDQ8WXG6 1647 aa15.97■□□□□ 0.15
UBR4-216ENST00000494503 DENND4BO75064 1496 aaPredicted RBP15.97■□□□□ 0.15
UBR4-216ENST00000494503 AKNAQ7Z591 1439 aa15.95■□□□□ 0.14
UBR4-216ENST00000494503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.95■□□□□ 0.14
UBR4-216ENST00000494503 ARHGEF40Q8TER5 1519 aa15.95■□□□□ 0.14
UBR4-216ENST00000494503 RICTORQ6R327 1708 aa15.95■□□□□ 0.14
UBR4-216ENST00000494503 RIMS1Q86UR5 1692 aaKnown RBP15.95■□□□□ 0.14
UBR4-216ENST00000494503 HECW1Q76N89 1606 aa15.9■□□□□ 0.14
UBR4-216ENST00000494503 ZFYVE16Q7Z3T8 1539 aa15.9■□□□□ 0.14
UBR4-216ENST00000494503 MLECQ14165 292 aa15.9■□□□□ 0.14
UBR4-216ENST00000494503 POGZQ7Z3K3 1410 aa15.88■□□□□ 0.13
UBR4-216ENST00000494503 MYO5CQ9NQX4 1742 aa15.88■□□□□ 0.13
UBR4-216ENST00000494503 FMN1Q68DA7 1419 aa15.87■□□□□ 0.13
UBR4-216ENST00000494503 MYT1LQ9UL68 1186 aa15.87■□□□□ 0.13
UBR4-216ENST00000494503 PCF11O94913 1555 aaKnown RBP15.87■□□□□ 0.13
UBR4-216ENST00000494503 SCAPERQ9BY12 1400 aa15.85■□□□□ 0.13
UBR4-216ENST00000494503 YEATS2Q9ULM3 1422 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms