RNA–Protein interactions for RNA: ENST00000494422.1

BRD9-211, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-211ENST00000494422 SYNJ2O15056 1496 aa10.63□□□□□ -0.71
BRD9-211ENST00000494422 SNAPC4Q5SXM2 1469 aa10.63□□□□□ -0.71
BRD9-211ENST00000494422 IGF1RP08069 1367 aa10.63□□□□□ -0.71
BRD9-211ENST00000494422 ADAMTS12P58397 1594 aa10.61□□□□□ -0.71
BRD9-211ENST00000494422 CHMP7Q8WUX9 453 aaPredicted RBP10.6□□□□□ -0.71
BRD9-211ENST00000494422 SLC24A1O60721 1099 aa10.59□□□□□ -0.71
BRD9-211ENST00000494422 EHMT2Q96KQ7 1210 aa10.59□□□□□ -0.71
BRD9-211ENST00000494422 CARMIL1Q5VZK9 1371 aa10.58□□□□□ -0.72
BRD9-211ENST00000494422 OSCARQ8IYS5 282 aa10.58□□□□□ -0.72
BRD9-211ENST00000494422 CSRNP3Q8WYN3 585 aa10.57□□□□□ -0.72
BRD9-211ENST00000494422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.57□□□□□ -0.721e-6■■□□□ 12.2
BRD9-211ENST00000494422 GRIN2AQ12879 1464 aa10.56□□□□□ -0.72
BRD9-211ENST00000494422 RAPGEF2Q9Y4G8 1499 aa10.55□□□□□ -0.72
BRD9-211ENST00000494422 FBLN2P98095 1184 aa10.55□□□□□ -0.72
BRD9-211ENST00000494422 NCBP3Q53F19 620 aaKnown RBP10.55□□□□□ -0.72
BRD9-211ENST00000494422 CHD1O14646 1710 aa10.55□□□□□ -0.72
BRD9-211ENST00000494422 RUSC2Q8N2Y8 1516 aa10.54□□□□□ -0.72
BRD9-211ENST00000494422 PRXQ9BXM0 1461 aa10.54□□□□□ -0.72
BRD9-211ENST00000494422 NUP160Q12769 1436 aa10.52□□□□□ -0.73
BRD9-211ENST00000494422 NPM3O75607 178 aaKnown RBP10.51□□□□□ -0.73
BRD9-211ENST00000494422 KIF21BO75037 1637 aa10.5□□□□□ -0.73
BRD9-211ENST00000494422 CLASP1Q7Z460 1538 aa10.48□□□□□ -0.73
BRD9-211ENST00000494422 KIAA0586Q9BVV6 1533 aa10.48□□□□□ -0.73
BRD9-211ENST00000494422 CEP170Q5SW79 1584 aa10.47□□□□□ -0.73
BRD9-211ENST00000494422 GOLGA3Q08378 1498 aa10.45□□□□□ -0.74
BRD9-211ENST00000494422 DNAJC5Q9H3Z4 198 aa10.45□□□□□ -0.74
BRD9-211ENST00000494422 FAM9AQ8IZU1 332 aaPredicted RBP10.44□□□□□ -0.74
BRD9-211ENST00000494422 CTTNBP2Q8WZ74 1663 aa10.42□□□□□ -0.74
BRD9-211ENST00000494422 SHROOM2Q13796 1616 aa10.42□□□□□ -0.74
BRD9-211ENST00000494422 IQGAP2Q13576 1575 aa10.42□□□□□ -0.74
BRD9-211ENST00000494422 JPH4Q96JJ6 628 aa10.41□□□□□ -0.74
BRD9-211ENST00000494422 U3KPZ7 1027 aaPredicted RBP10.41□□□□□ -0.74
BRD9-211ENST00000494422 CARMIL2Q6F5E8 1435 aa10.4□□□□□ -0.75
BRD9-211ENST00000494422 UGGT2Q9NYU1 1516 aa10.38□□□□□ -0.75
BRD9-211ENST00000494422 UBTFP17480 764 aaKnown RBP10.37□□□□□ -0.75
BRD9-211ENST00000494422 ARHGEF11O15085 1522 aa10.37□□□□□ -0.75
BRD9-211ENST00000494422 TNIKQ9UKE5 1360 aa10.36□□□□□ -0.75
BRD9-211ENST00000494422 PRG4Q92954 1404 aaPredicted RBP10.35□□□□□ -0.75
BRD9-211ENST00000494422 DSG3P32926 999 aa10.35□□□□□ -0.75
BRD9-211ENST00000494422 SPINK5Q9NQ38 1064 aaPredicted RBP10.35□□□□□ -0.75
BRD9-211ENST00000494422 POTEHQ6S545 545 aa10.34□□□□□ -0.75
BRD9-211ENST00000494422 EFCAB5A4FU69 1503 aa10.33□□□□□ -0.76
BRD9-211ENST00000494422 RIMBP3CA6NJZ7 1639 aa10.33□□□□□ -0.76
BRD9-211ENST00000494422 RIMBP3BA6NNM3 1639 aa10.33□□□□□ -0.76
BRD9-211ENST00000494422 RIMBP3Q9UFD9 1639 aa10.33□□□□□ -0.76
BRD9-211ENST00000494422 KIAA0556O60303 1618 aa10.31□□□□□ -0.76
BRD9-211ENST00000494422 DISP1Q96F81 1524 aa10.31□□□□□ -0.76
BRD9-211ENST00000494422 SAMD9Q5K651 1589 aa10.3□□□□□ -0.76
BRD9-211ENST00000494422 PTPRGP23470 1445 aa10.28□□□□□ -0.76
BRD9-211ENST00000494422 ARAP1Q96P48 1450 aa10.28□□□□□ -0.76
BRD9-211ENST00000494422 CAPN15O75808 1086 aa10.26□□□□□ -0.77
BRD9-211ENST00000494422 ERCC6L2Q5T890 1561 aa10.26□□□□□ -0.77
BRD9-211ENST00000494422 FMN1Q68DA7 1419 aa10.24□□□□□ -0.77
BRD9-211ENST00000494422 CLIP1P30622 1438 aa10.24□□□□□ -0.77
BRD9-211ENST00000494422 UHRF1BP1LA0JNW5 1464 aa10.23□□□□□ -0.77
BRD9-211ENST00000494422 CYB5RLQ6IPT4 315 aa10.23□□□□□ -0.77
BRD9-211ENST00000494422 UACAQ9BZF9 1416 aa10.23□□□□□ -0.77
BRD9-211ENST00000494422 ARHGAP35Q9NRY4 1499 aa10.23□□□□□ -0.77
BRD9-211ENST00000494422 CEP162Q5TB80 1403 aa10.22□□□□□ -0.77
BRD9-211ENST00000494422 LOC105371045A0A1W2PR82 267 aa10.2□□□□□ -0.78
BRD9-211ENST00000494422 NPM1P06748 294 aaKnown RBP eCLIP10.2□□□□□ -0.78
BRD9-211ENST00000494422 ABCC2Q92887 1545 aa10.2□□□□□ -0.78
BRD9-211ENST00000494422 ABCA8O94911 1581 aa10.19□□□□□ -0.78
BRD9-211ENST00000494422 FHOD3Q2V2M9 1422 aa10.19□□□□□ -0.78
BRD9-211ENST00000494422 RANGAP1P46060 587 aaPredicted RBP10.17□□□□□ -0.78
BRD9-211ENST00000494422 P3H3Q8IVL6 736 aa10.17□□□□□ -0.78
BRD9-211ENST00000494422 RAPGEF6Q8TEU7 1601 aa10.17□□□□□ -0.78
BRD9-211ENST00000494422 KDM5BQ9UGL1 1544 aa10.17□□□□□ -0.78
BRD9-211ENST00000494422 SLC4A2P04920 1241 aa10.16□□□□□ -0.78
BRD9-211ENST00000494422 ADCY10Q96PN6 1610 aa10.15□□□□□ -0.78
BRD9-211ENST00000494422 PLB1Q6P1J6 1458 aa10.15□□□□□ -0.78
BRD9-211ENST00000494422 CASKIN1Q8WXD9 1431 aa10.15□□□□□ -0.79
BRD9-211ENST00000494422 HECW1Q76N89 1606 aa10.15□□□□□ -0.79
BRD9-211ENST00000494422 FYCO1Q9BQS8 1478 aa10.14□□□□□ -0.79
BRD9-211ENST00000494422 MAPKBP1O60336 1514 aa10.13□□□□□ -0.79
BRD9-211ENST00000494422 TTBK1Q5TCY1 1321 aaPredicted RBP10.13□□□□□ -0.79
BRD9-211ENST00000494422 CCDC18Q5T9S5 1454 aa10.13□□□□□ -0.79
BRD9-211ENST00000494422 CDK11AQ9UQ88 783 aaPredicted RBP10.12□□□□□ -0.79
BRD9-211ENST00000494422 NUP153P49790 1475 aaKnown RBP10.11□□□□□ -0.79
BRD9-211ENST00000494422 VPS8Q8N3P4 1428 aa10.11□□□□□ -0.79
BRD9-211ENST00000494422 KCNA4P22459 653 aa10.1□□□□□ -0.79
BRD9-211ENST00000494422 ATP10BO94823 1461 aa10.1□□□□□ -0.79
BRD9-211ENST00000494422 ZCCHC11Q5TAX3 1644 aaKnown RBP10.09□□□□□ -0.79
BRD9-211ENST00000494422 EPRSP07814 1512 aaKnown RBP10.08□□□□□ -0.8
BRD9-211ENST00000494422 PCF11O94913 1555 aaKnown RBP10.08□□□□□ -0.8
BRD9-211ENST00000494422 PLEKHD1A6NEE1 506 aa10.07□□□□□ -0.8
BRD9-211ENST00000494422 MAP3K1Q13233 1512 aa10.07□□□□□ -0.8
BRD9-211ENST00000494422 ASXL2Q76L83 1435 aa10.07□□□□□ -0.8
BRD9-211ENST00000494422 WDR7Q9Y4E6 1490 aa10.06□□□□□ -0.8
BRD9-211ENST00000494422 ABCC10Q5T3U5 1492 aa10.05□□□□□ -0.8
BRD9-211ENST00000494422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.05□□□□□ -0.8
BRD9-211ENST00000494422 HNRNPUL2Q1KMD3 747 aaKnown RBP10.05□□□□□ -0.8
BRD9-211ENST00000494422 ATP1B4Q9UN42 357 aaPredicted RBP10.05□□□□□ -0.8
BRD9-211ENST00000494422 ABCB7O75027 752 aa10.04□□□□□ -0.8
BRD9-211ENST00000494422 APLP2Q06481 763 aa10.04□□□□□ -0.8
BRD9-211ENST00000494422 GLI2P10070 1586 aa10.04□□□□□ -0.8
BRD9-211ENST00000494422 TRHP20396 242 aaPredicted RBP10.03□□□□□ -0.8
BRD9-211ENST00000494422 TROQ12816 1431 aaPredicted RBP10.02□□□□□ -0.81
BRD9-211ENST00000494422 CDK13Q14004 1512 aaKnown RBP10.01□□□□□ -0.81
BRD9-211ENST00000494422 DIP2BQ9P265 1576 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms