RNA–Protein interactions for RNA: ENST00000494422.1

BRD9-211, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-211ENST00000494422 AEBP2Q6ZN18 517 aaPredicted RBP17.44■□□□□ 0.38
BRD9-211ENST00000494422 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
BRD9-211ENST00000494422 NISCHQ9Y2I1 1504 aa15.16■□□□□ 0.02
BRD9-211ENST00000494422 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
BRD9-211ENST00000494422 PHF23Q9BUL5 403 aaPredicted RBP14.61□□□□□ -0.07
BRD9-211ENST00000494422 FOXD1Q16676 465 aa13.9□□□□□ -0.18
BRD9-211ENST00000494422 CCDC180Q9P1Z9 1646 aa13.46□□□□□ -0.26
BRD9-211ENST00000494422 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
BRD9-211ENST00000494422 MSH5O43196 834 aa13.03□□□□□ -0.32
BRD9-211ENST00000494422 ABCC9O60706 1549 aa12.88□□□□□ -0.35
BRD9-211ENST00000494422 PIAS4Q8N2W9 510 aaPredicted RBP12.84□□□□□ -0.35
BRD9-211ENST00000494422 PPP6R1Q9UPN7 881 aa12.81□□□□□ -0.36
BRD9-211ENST00000494422 PLPPR3Q6T4P5 718 aa12.74□□□□□ -0.37
BRD9-211ENST00000494422 ADRA2BP18089 450 aa12.71□□□□□ -0.37
BRD9-211ENST00000494422 ZCCHC6Q5VYS8 1495 aaKnown RBP12.66□□□□□ -0.38
BRD9-211ENST00000494422 MYO15BQ96JP2 1530 aa12.66□□□□□ -0.38
BRD9-211ENST00000494422 DCAF1Q9Y4B6 1507 aa12.63□□□□□ -0.39
BRD9-211ENST00000494422 NACADO15069 1562 aa12.62□□□□□ -0.39
BRD9-211ENST00000494422 RB1CC1Q8TDY2 1594 aa12.58□□□□□ -0.4
BRD9-211ENST00000494422 DCAF8L2P0C7V8 631 aa12.51□□□□□ -0.41
BRD9-211ENST00000494422 UNC13AQ9UPW8 1703 aa12.19□□□□□ -0.46
BRD9-211ENST00000494422 SHROOM4Q9ULL8 1493 aa12.18□□□□□ -0.46
BRD9-211ENST00000494422 SCRIBQ14160 1630 aa12.17□□□□□ -0.46
BRD9-211ENST00000494422 BICRAQ9NZM4 1560 aa12.1□□□□□ -0.47
BRD9-211ENST00000494422 PABPN1Q86U42 306 aaKnown RBP eCLIP12.03□□□□□ -0.48
BRD9-211ENST00000494422 EIF4G1Q04637 1599 aaKnown RBP11.8□□□□□ -0.52
BRD9-211ENST00000494422 MAPK8IP2Q13387 824 aaPredicted RBP11.79□□□□□ -0.52
BRD9-211ENST00000494422 BAZ1AQ9NRL2 1556 aaPredicted RBP11.77□□□□□ -0.53
BRD9-211ENST00000494422 DMRT2Q9Y5R5 561 aa11.72□□□□□ -0.53
BRD9-211ENST00000494422 SMARCA4P51532 1647 aa11.71□□□□□ -0.53
BRD9-211ENST00000494422 CECR2Q9BXF3 1484 aa11.7□□□□□ -0.54
BRD9-211ENST00000494422 CC2D2AQ9P2K1 1620 aa11.7□□□□□ -0.54
BRD9-211ENST00000494422 SMARCA2P51531 1590 aa11.67□□□□□ -0.54
BRD9-211ENST00000494422 PEG3Q9GZU2 1588 aa11.66□□□□□ -0.54
BRD9-211ENST00000494422 NCAPD3P42695 1498 aa11.63□□□□□ -0.55
BRD9-211ENST00000494422 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
BRD9-211ENST00000494422 DNAJC5BQ9UF47 199 aa11.62□□□□□ -0.55
BRD9-211ENST00000494422 ATAD2BQ9ULI0 1458 aa11.62□□□□□ -0.55
BRD9-211ENST00000494422 HMGXB3Q12766 1538 aa11.6□□□□□ -0.55
BRD9-211ENST00000494422 RSF1Q96T23 1441 aaPredicted RBP11.58□□□□□ -0.56
BRD9-211ENST00000494422 BAZ1BQ9UIG0 1483 aaKnown RBP11.54□□□□□ -0.56
BRD9-211ENST00000494422 SCAF1Q9H7N4 1312 aaKnown RBP11.5□□□□□ -0.57
BRD9-211ENST00000494422 WIZO95785 1651 aa11.49□□□□□ -0.57
BRD9-211ENST00000494422 TOP2AP11388 1531 aaKnown RBP11.45□□□□□ -0.58
BRD9-211ENST00000494422 CACNB1Q02641 598 aaPredicted RBP11.37□□□□□ -0.59
BRD9-211ENST00000494422 SUPT5HO00267 1087 aaKnown RBP11.34□□□□□ -0.59
BRD9-211ENST00000494422 LAMC3Q9Y6N6 1575 aa11.31□□□□□ -0.6
BRD9-211ENST00000494422 CCDC88BA6NC98 1476 aa11.29□□□□□ -0.6
BRD9-211ENST00000494422 CADPSQ9ULU8 1353 aa11.28□□□□□ -0.6
BRD9-211ENST00000494422 CFTRP13569 1480 aa11.25□□□□□ -0.61
BRD9-211ENST00000494422 PDS5BQ9NTI5 1447 aa11.23□□□□□ -0.61
BRD9-211ENST00000494422 HOXD11P31277 338 aaPredicted RBP11.19□□□□□ -0.62
BRD9-211ENST00000494422 PRDM2Q13029 1718 aa11.18□□□□□ -0.62
BRD9-211ENST00000494422 NESP48681 1621 aa11.17□□□□□ -0.62
BRD9-211ENST00000494422 DCAF8L1A6NGE4 600 aa11.16□□□□□ -0.62
BRD9-211ENST00000494422 PPP4R3CPQ6ZMV5 832 aa11.16□□□□□ -0.62
BRD9-211ENST00000494422 RNF39Q9H2S5 420 aa11.16□□□□□ -0.62
BRD9-211ENST00000494422 ERCC6Q03468 1493 aa11.15□□□□□ -0.62
BRD9-211ENST00000494422 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
BRD9-211ENST00000494422 CEP164Q9UPV0 1460 aa11.12□□□□□ -0.63
BRD9-211ENST00000494422 KIF21AQ7Z4S6 1674 aa11.08□□□□□ -0.64
BRD9-211ENST00000494422 ABCC8Q09428 1581 aa11.07□□□□□ -0.64
BRD9-211ENST00000494422 MRC2Q9UBG0 1479 aa11.06□□□□□ -0.64
BRD9-211ENST00000494422 CUX2O14529 1486 aa11.04□□□□□ -0.64
BRD9-211ENST00000494422 THOC2Q8NI27 1593 aaKnown RBP11.03□□□□□ -0.64
BRD9-211ENST00000494422 WDR62O43379 1518 aa11.02□□□□□ -0.65
BRD9-211ENST00000494422 CNKSR2Q8WXI2 1034 aa11□□□□□ -0.65
BRD9-211ENST00000494422 RNF216Q9NWF9 866 aaPredicted RBP10.99□□□□□ -0.65
BRD9-211ENST00000494422 DNMBPQ6XZF7 1577 aa10.99□□□□□ -0.65
BRD9-211ENST00000494422 URB2Q14146 1524 aaKnown RBP10.96□□□□□ -0.65
BRD9-211ENST00000494422 TOPBP1Q92547 1522 aa10.96□□□□□ -0.65
BRD9-211ENST00000494422 WRNQ14191 1432 aaPredicted RBP eCLIP10.94□□□□□ -0.667e-9■■□□□ 11.4
BRD9-211ENST00000494422 C1QBPQ07021 282 aaKnown RBP10.92□□□□□ -0.66
BRD9-211ENST00000494422 TOP2BQ02880 1626 aa10.91□□□□□ -0.66
BRD9-211ENST00000494422 CUX1P39880 1505 aa10.9□□□□□ -0.66
BRD9-211ENST00000494422 IFT140Q96RY7 1462 aa10.9□□□□□ -0.66
BRD9-211ENST00000494422 BIVM-ERCC5R4GMW8 1640 aa10.9□□□□□ -0.66
BRD9-211ENST00000494422 POLA1P09884 1462 aaPredicted RBP10.87□□□□□ -0.67
BRD9-211ENST00000494422 WDR97A6NE52 1622 aa10.87□□□□□ -0.67
BRD9-211ENST00000494422 FGD5Q6ZNL6 1462 aa10.86□□□□□ -0.67
BRD9-211ENST00000494422 SOGA1O94964 1423 aa10.84□□□□□ -0.67
BRD9-211ENST00000494422 SYNJ1O43426 1573 aa10.84□□□□□ -0.67
BRD9-211ENST00000494422 TARBP1Q13395 1621 aaKnown RBP10.82□□□□□ -0.68
BRD9-211ENST00000494422 ABCA10Q8WWZ4 1543 aa10.82□□□□□ -0.68
BRD9-211ENST00000494422 TRIM41Q8WV44 630 aa10.78□□□□□ -0.68
BRD9-211ENST00000494422 RAD54L2Q9Y4B4 1467 aa10.77□□□□□ -0.69
BRD9-211ENST00000494422 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
BRD9-211ENST00000494422 KIF27Q86VH2 1401 aa10.73□□□□□ -0.69
BRD9-211ENST00000494422 GRIN2BQ13224 1484 aa10.73□□□□□ -0.69
BRD9-211ENST00000494422 GAPVD1Q14C86 1478 aa10.73□□□□□ -0.69
BRD9-211ENST00000494422 ZNF608Q9ULD9 1512 aaPredicted RBP10.73□□□□□ -0.69
BRD9-211ENST00000494422 ABCA5Q8WWZ7 1642 aa10.73□□□□□ -0.69
BRD9-211ENST00000494422 AQRO60306 1485 aaKnown RBP eCLIP10.71□□□□□ -0.698e-9■■■■□ 19.5
BRD9-211ENST00000494422 ERICH3Q5RHP9 1530 aa10.71□□□□□ -0.69
BRD9-211ENST00000494422 TDRD9Q8NDG6 1382 aaKnown RBP10.71□□□□□ -0.69
BRD9-211ENST00000494422 MAGI1Q96QZ7 1491 aaPredicted RBP10.7□□□□□ -0.7
BRD9-211ENST00000494422 EEA1Q15075 1411 aa10.69□□□□□ -0.7
BRD9-211ENST00000494422 PBRM1Q86U86 1689 aa10.67□□□□□ -0.7
BRD9-211ENST00000494422 FHAD1B1AJZ9 1412 aa10.64□□□□□ -0.71
BRD9-211ENST00000494422 CUL7Q14999 1698 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms