RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 RUSC2Q8N2Y8 1516 aa16.86■□□□□ 0.29
UFD1-210ENST00000494054 CUL7Q14999 1698 aa16.85■□□□□ 0.29
UFD1-210ENST00000494054 CARMIL1Q5VZK9 1371 aa16.83■□□□□ 0.28
UFD1-210ENST00000494054 KIAA0586Q9BVV6 1533 aa16.81■□□□□ 0.28
UFD1-210ENST00000494054 RAPGEF2Q9Y4G8 1499 aa16.67■□□□□ 0.26
UFD1-210ENST00000494054 IQGAP2Q13576 1575 aa16.66■□□□□ 0.26
UFD1-210ENST00000494054 ADCY10Q96PN6 1610 aa16.65■□□□□ 0.26
UFD1-210ENST00000494054 TTBK1Q5TCY1 1321 aaPredicted RBP16.65■□□□□ 0.26
UFD1-210ENST00000494054 PTPRGP23470 1445 aa16.64■□□□□ 0.25
UFD1-210ENST00000494054 NPM1P06748 294 aaKnown RBP eCLIP16.64■□□□□ 0.25
UFD1-210ENST00000494054 CARMIL2Q6F5E8 1435 aa16.62■□□□□ 0.25
UFD1-210ENST00000494054 TNIKQ9UKE5 1360 aa16.62■□□□□ 0.25
UFD1-210ENST00000494054 DISP1Q96F81 1524 aa16.61■□□□□ 0.25
UFD1-210ENST00000494054 KIF13AQ9H1H9 1805 aa16.6■□□□□ 0.25
UFD1-210ENST00000494054 MAPKBP1O60336 1514 aa16.59■□□□□ 0.25
UFD1-210ENST00000494054 FAM69CQ0P6D2 419 aa16.58■□□□□ 0.24
UFD1-210ENST00000494054 UGGT2Q9NYU1 1516 aa16.57■□□□□ 0.24
UFD1-210ENST00000494054 ABCC10Q5T3U5 1492 aa16.57■□□□□ 0.24
UFD1-210ENST00000494054 PRXQ9BXM0 1461 aa16.56■□□□□ 0.24
UFD1-210ENST00000494054 DIP2BQ9P265 1576 aa16.53■□□□□ 0.24
UFD1-210ENST00000494054 UACAQ9BZF9 1416 aa16.52■□□□□ 0.23
UFD1-210ENST00000494054 ABCC2Q92887 1545 aa16.51■□□□□ 0.23
UFD1-210ENST00000494054 KIAA0556O60303 1618 aa16.51■□□□□ 0.23
UFD1-210ENST00000494054 UHRF1BP1LA0JNW5 1464 aa16.5■□□□□ 0.23
UFD1-210ENST00000494054 CSRNP3Q8WYN3 585 aa16.5■□□□□ 0.23
UFD1-210ENST00000494054 CTTNBP2Q8WZ74 1663 aa16.5■□□□□ 0.23
UFD1-210ENST00000494054 ASXL2Q76L83 1435 aa16.45■□□□□ 0.22
UFD1-210ENST00000494054 KDM5BQ9UGL1 1544 aa16.44■□□□□ 0.22
UFD1-210ENST00000494054 GOLGA3Q08378 1498 aa16.43■□□□□ 0.22
UFD1-210ENST00000494054 PLB1Q6P1J6 1458 aa16.43■□□□□ 0.22
UFD1-210ENST00000494054 AEBP2Q6ZN18 517 aaPredicted RBP16.41■□□□□ 0.22
UFD1-210ENST00000494054 FAM9AQ8IZU1 332 aaPredicted RBP16.41■□□□□ 0.22
UFD1-210ENST00000494054 TSPOAP1O95153 1857 aa16.39■□□□□ 0.22
UFD1-210ENST00000494054 EEA1Q15075 1411 aa16.39■□□□□ 0.21
UFD1-210ENST00000494054 ZCCHC11Q5TAX3 1644 aaKnown RBP16.38■□□□□ 0.21
UFD1-210ENST00000494054 P3H3Q8IVL6 736 aa16.38■□□□□ 0.21
UFD1-210ENST00000494054 GLI2P10070 1586 aa16.38■□□□□ 0.21
UFD1-210ENST00000494054 ABCA8O94911 1581 aa16.37■□□□□ 0.21
UFD1-210ENST00000494054 EPRSP07814 1512 aaKnown RBP16.36■□□□□ 0.21
UFD1-210ENST00000494054 CHIC1Q5VXU3 224 aa16.35■□□□□ 0.21
UFD1-210ENST00000494054 KDM6BO15054 1643 aa16.33■□□□□ 0.2
UFD1-210ENST00000494054 PPRC1Q5VV67 1664 aaKnown RBP16.32■□□□□ 0.2
UFD1-210ENST00000494054 SAMD9Q5K651 1589 aa16.3■□□□□ 0.2
UFD1-210ENST00000494054 WDR7Q9Y4E6 1490 aa16.3■□□□□ 0.2
UFD1-210ENST00000494054 RANGAP1P46060 587 aaPredicted RBP16.3■□□□□ 0.2
UFD1-210ENST00000494054 ARID3CA6NKF2 412 aa16.29■□□□□ 0.2
UFD1-210ENST00000494054 MAP3K4Q9Y6R4 1608 aa16.28■□□□□ 0.2
UFD1-210ENST00000494054 KCNH8Q96L42 1107 aa16.27■□□□□ 0.2
UFD1-210ENST00000494054 KIF21BO75037 1637 aa16.26■□□□□ 0.19
UFD1-210ENST00000494054 ATP10BO94823 1461 aa16.25■□□□□ 0.19
UFD1-210ENST00000494054 COL17A1Q9UMD9 1497 aaPredicted RBP16.25■□□□□ 0.19
UFD1-210ENST00000494054 EHMT2Q96KQ7 1210 aa16.24■□□□□ 0.19
UFD1-210ENST00000494054 FHOD3Q2V2M9 1422 aa16.23■□□□□ 0.19
UFD1-210ENST00000494054 TEX14Q8IWB6 1497 aa16.21■□□□□ 0.19
UFD1-210ENST00000494054 CD109Q6YHK3 1445 aa16.2■□□□□ 0.18
UFD1-210ENST00000494054 RAPGEF6Q8TEU7 1601 aa16.19■□□□□ 0.18
UFD1-210ENST00000494054 UBTFP17480 764 aaKnown RBP16.18■□□□□ 0.18
UFD1-210ENST00000494054 MAGI3Q5TCQ9 1506 aa16.18■□□□□ 0.18
UFD1-210ENST00000494054 CFAP43Q8NDM7 1665 aa16.18■□□□□ 0.18
UFD1-210ENST00000494054 NUP153P49790 1475 aaKnown RBP16.17■□□□□ 0.18
UFD1-210ENST00000494054 KDM4FA0A1W2PPD8 638 aa16.17■□□□□ 0.18
UFD1-210ENST00000494054 EFCAB5A4FU69 1503 aa16.15■□□□□ 0.18
UFD1-210ENST00000494054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.15■□□□□ 0.18
UFD1-210ENST00000494054 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
UFD1-210ENST00000494054 ABCA9Q8IUA7 1624 aa16.1■□□□□ 0.17
UFD1-210ENST00000494054 PLEKHD1A6NEE1 506 aa16.08■□□□□ 0.16
UFD1-210ENST00000494054 ARHGAP35Q9NRY4 1499 aa16.08■□□□□ 0.16
UFD1-210ENST00000494054 ARAP3Q8WWN8 1544 aa16.04■□□□□ 0.16
UFD1-210ENST00000494054 CDK13Q14004 1512 aaKnown RBP16.04■□□□□ 0.16
UFD1-210ENST00000494054 ADGRL1O94910 1474 aa16.03■□□□□ 0.16
UFD1-210ENST00000494054 ATP1B4Q9UN42 357 aaPredicted RBP16.02■□□□□ 0.16
UFD1-210ENST00000494054 FMN1Q68DA7 1419 aa16.02■□□□□ 0.15
UFD1-210ENST00000494054 PHLDB1Q86UU1 1377 aa16■□□□□ 0.15
UFD1-210ENST00000494054 NEO1Q92859 1461 aa16■□□□□ 0.15
UFD1-210ENST00000494054 RAPGEF3O95398 923 aa16■□□□□ 0.15
UFD1-210ENST00000494054 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.99■□□□□ 0.15
UFD1-210ENST00000494054 HECW1Q76N89 1606 aa15.97■□□□□ 0.15
UFD1-210ENST00000494054 TTC37Q6PGP7 1564 aa15.96■□□□□ 0.14
UFD1-210ENST00000494054 FRMPD1Q5SYB0 1578 aa15.93■□□□□ 0.14
UFD1-210ENST00000494054 AKNAQ7Z591 1439 aa15.93■□□□□ 0.14
UFD1-210ENST00000494054 FANCAO15360 1455 aa15.92■□□□□ 0.14
UFD1-210ENST00000494054 CDK11AQ9UQ88 783 aaPredicted RBP15.91■□□□□ 0.14
UFD1-210ENST00000494054 LRRIQ1Q96JM4 1722 aa15.91■□□□□ 0.14
UFD1-210ENST00000494054 DENND4BO75064 1496 aaPredicted RBP15.9■□□□□ 0.14
UFD1-210ENST00000494054 PLCH2O75038 1416 aa15.89■□□□□ 0.13
UFD1-210ENST00000494054 TROQ12816 1431 aaPredicted RBP15.88■□□□□ 0.13
UFD1-210ENST00000494054 CASKIN1Q8WXD9 1431 aa15.88■□□□□ 0.13
UFD1-210ENST00000494054 KIF14Q15058 1648 aa15.88■□□□□ 0.13
UFD1-210ENST00000494054 CLIP1P30622 1438 aa15.87■□□□□ 0.13
UFD1-210ENST00000494054 PCF11O94913 1555 aaKnown RBP15.87■□□□□ 0.13
UFD1-210ENST00000494054 CFAP74Q9C0B2 1584 aa15.87■□□□□ 0.13
UFD1-210ENST00000494054 RICTORQ6R327 1708 aa15.86■□□□□ 0.13
UFD1-210ENST00000494054 ILDR1Q86SU0 546 aaPredicted RBP15.86■□□□□ 0.13
UFD1-210ENST00000494054 EFCAB2Q5VUJ9 269 aa15.84■□□□□ 0.13
UFD1-210ENST00000494054 SCAPERQ9BY12 1400 aa15.84■□□□□ 0.13
UFD1-210ENST00000494054 CCDC18Q5T9S5 1454 aa15.82■□□□□ 0.12
UFD1-210ENST00000494054 MYO5CQ9NQX4 1742 aa15.82■□□□□ 0.12
UFD1-210ENST00000494054 ARID4BQ4LE39 1312 aaPredicted RBP15.81■□□□□ 0.12
UFD1-210ENST00000494054 ARHGEF40Q8TER5 1519 aa15.81■□□□□ 0.12
UFD1-210ENST00000494054 YEATS2Q9ULM3 1422 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms