RNA–Protein interactions for RNA: ENST00000493875.5

GAD1-216, Transcript of glutamate decarboxylase 1, humanhuman

TSL 1 (best)

Gene GAD1, Length 3,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAD1-216ENST00000493875 CARMIL1Q5VZK9 1371 aa12.95□□□□□ -0.34
GAD1-216ENST00000493875 ATAD2BQ9ULI0 1458 aa12.93□□□□□ -0.34
GAD1-216ENST00000493875 SLC4A1APQ9BWU0 796 aaKnown RBP12.92□□□□□ -0.34
GAD1-216ENST00000493875 RAB3GAP2Q9H2M9 1393 aa12.91□□□□□ -0.34
GAD1-216ENST00000493875 CLSPNQ9HAW4 1339 aa12.91□□□□□ -0.34
GAD1-216ENST00000493875 MRS2Q9HD23 443 aa12.9□□□□□ -0.34
GAD1-216ENST00000493875 KDM2AQ9Y2K7 1162 aa12.89□□□□□ -0.35
GAD1-216ENST00000493875 DHX57Q6P158 1386 aaKnown RBP12.89□□□□□ -0.35
GAD1-216ENST00000493875 EIF4G2P78344 907 aaKnown RBP eCLIP12.86□□□□□ -0.35
GAD1-216ENST00000493875 FOXD1Q16676 465 aa12.86□□□□□ -0.35
GAD1-216ENST00000493875 SETD5Q9C0A6 1442 aa12.83□□□□□ -0.35
GAD1-216ENST00000493875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.82□□□□□ -0.36
GAD1-216ENST00000493875 DAXXQ9UER7 740 aaPredicted RBP12.81□□□□□ -0.36
GAD1-216ENST00000493875 NPM2Q86SE8 214 aaKnown RBP12.81□□□□□ -0.36
GAD1-216ENST00000493875 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
GAD1-216ENST00000493875 FHOD3Q2V2M9 1422 aa12.79□□□□□ -0.36
GAD1-216ENST00000493875 TMC1Q8TDI8 760 aa12.78□□□□□ -0.36
GAD1-216ENST00000493875 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
GAD1-216ENST00000493875 SYNJ1O43426 1573 aa12.77□□□□□ -0.37
GAD1-216ENST00000493875 FHAD1B1AJZ9 1412 aa12.77□□□□□ -0.37
GAD1-216ENST00000493875 PPP1R15AO75807 674 aaPredicted RBP12.76□□□□□ -0.37
GAD1-216ENST00000493875 CHMP7Q8WUX9 453 aaPredicted RBP12.76□□□□□ -0.37
GAD1-216ENST00000493875 KIF21BO75037 1637 aa12.76□□□□□ -0.37
GAD1-216ENST00000493875 RGL3Q3MIN7 710 aa12.75□□□□□ -0.37
GAD1-216ENST00000493875 HSPA5P11021 654 aaKnown RBP12.73□□□□□ -0.37
GAD1-216ENST00000493875 CCDC136Q96JN2 1154 aa12.73□□□□□ -0.37
GAD1-216ENST00000493875 TSHZ2Q9NRE2 1034 aa12.73□□□□□ -0.37
GAD1-216ENST00000493875 TSPY4P0CV99 314 aa12.72□□□□□ -0.37
GAD1-216ENST00000493875 TSPY10P0CW01 314 aa12.72□□□□□ -0.37
GAD1-216ENST00000493875 NBR1Q14596 966 aa12.72□□□□□ -0.37
GAD1-216ENST00000493875 CFDP1Q9UEE9 299 aaPredicted RBP12.72□□□□□ -0.37
GAD1-216ENST00000493875 ARHGAP35Q9NRY4 1499 aa12.71□□□□□ -0.37
GAD1-216ENST00000493875 ARAP1Q96P48 1450 aa12.71□□□□□ -0.38
GAD1-216ENST00000493875 IGF1RP08069 1367 aa12.71□□□□□ -0.38
GAD1-216ENST00000493875 CADPSQ9ULU8 1353 aa12.71□□□□□ -0.38
GAD1-216ENST00000493875 EIF4G1Q04637 1599 aaKnown RBP12.71□□□□□ -0.38
GAD1-216ENST00000493875 B4GALNT3Q6L9W6 998 aa12.71□□□□□ -0.38
GAD1-216ENST00000493875 ANP32EQ9BTT0 268 aa12.68□□□□□ -0.38
GAD1-216ENST00000493875 ANP32AP39687 249 aaKnown RBP12.67□□□□□ -0.38
GAD1-216ENST00000493875 SENP3Q9H4L4 574 aaPredicted RBP12.67□□□□□ -0.38
GAD1-216ENST00000493875 PHLDB1Q86UU1 1377 aa12.66□□□□□ -0.38
GAD1-216ENST00000493875 RBM19Q9Y4C8 960 aaKnown RBP12.66□□□□□ -0.38
GAD1-216ENST00000493875 BCL11AQ9H165 835 aa12.65□□□□□ -0.38
GAD1-216ENST00000493875 TIMELESSQ9UNS1 1208 aa12.65□□□□□ -0.38
GAD1-216ENST00000493875 CCER2I3L3R5 266 aa12.64□□□□□ -0.39
GAD1-216ENST00000493875 L3MBTL2Q969R5 705 aa12.64□□□□□ -0.39
GAD1-216ENST00000493875 CHGAP10645 457 aaKnown RBP12.64□□□□□ -0.39
GAD1-216ENST00000493875 MPHOSPH9Q99550 1183 aa12.64□□□□□ -0.39
GAD1-216ENST00000493875 CARD11Q9BXL7 1154 aa12.64□□□□□ -0.39
GAD1-216ENST00000493875 PLEKHD1A6NEE1 506 aa12.63□□□□□ -0.39
GAD1-216ENST00000493875 RAD54L2Q9Y4B4 1467 aa12.62□□□□□ -0.39
GAD1-216ENST00000493875 FGD5Q6ZNL6 1462 aa12.59□□□□□ -0.39
GAD1-216ENST00000493875 CANXP27824 592 aaKnown RBP12.59□□□□□ -0.39
GAD1-216ENST00000493875 PKD2Q13563 968 aa12.58□□□□□ -0.4
GAD1-216ENST00000493875 DCAF11Q8TEB1 546 aa12.58□□□□□ -0.4
GAD1-216ENST00000493875 PRXQ9BXM0 1461 aa12.58□□□□□ -0.4
GAD1-216ENST00000493875 FMN1Q68DA7 1419 aa12.58□□□□□ -0.4
GAD1-216ENST00000493875 PPP4R2Q9NY27 417 aa12.57□□□□□ -0.4
GAD1-216ENST00000493875 FANCD2Q9BXW9 1451 aa12.56□□□□□ -0.4
GAD1-216ENST00000493875 ZBTB47Q9UFB7 747 aaPredicted RBP12.54□□□□□ -0.4
GAD1-216ENST00000493875 CC2D1BQ5T0F9 858 aaKnown RBP12.54□□□□□ -0.4
GAD1-216ENST00000493875 CUX1P39880 1505 aa12.53□□□□□ -0.4
GAD1-216ENST00000493875 RRBP1Q9P2E9 1410 aaKnown RBP12.52□□□□□ -0.4
GAD1-216ENST00000493875 NCAPD3P42695 1498 aa12.52□□□□□ -0.4
GAD1-216ENST00000493875 LRRC9Q6ZRR7 1453 aa12.52□□□□□ -0.41
GAD1-216ENST00000493875 ZNF644Q9H582 1327 aaPredicted RBP12.52□□□□□ -0.41
GAD1-216ENST00000493875 BICRAQ9NZM4 1560 aa12.51□□□□□ -0.41
GAD1-216ENST00000493875 WDR43Q15061 677 aaKnown RBP eCLIP12.51□□□□□ -0.41
GAD1-216ENST00000493875 CCDC18Q5T9S5 1454 aa12.5□□□□□ -0.41
GAD1-216ENST00000493875 TOP2BQ02880 1626 aa12.49□□□□□ -0.41
GAD1-216ENST00000493875 CFTRP13569 1480 aa12.47□□□□□ -0.41
GAD1-216ENST00000493875 FGD6Q6ZV73 1430 aa12.47□□□□□ -0.41
GAD1-216ENST00000493875 ERICH3Q5RHP9 1530 aa12.46□□□□□ -0.41
GAD1-216ENST00000493875 PRKRIP1Q9H875 184 aaPredicted RBP12.46□□□□□ -0.42
GAD1-216ENST00000493875 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
GAD1-216ENST00000493875 HNRNPMP52272 730 aaKnown RBP eCLIP12.45□□□□□ -0.42
GAD1-216ENST00000493875 NUP155O75694 1391 aa12.45□□□□□ -0.42
GAD1-216ENST00000493875 NESP48681 1621 aa12.45□□□□□ -0.42
GAD1-216ENST00000493875 DNAJC5BQ9UF47 199 aa12.44□□□□□ -0.42
GAD1-216ENST00000493875 NEUROD2Q15784 382 aa12.44□□□□□ -0.42
GAD1-216ENST00000493875 WASHC2AQ641Q2 1341 aa12.44□□□□□ -0.42
GAD1-216ENST00000493875 CCDC184Q52MB2 194 aa12.43□□□□□ -0.42
GAD1-216ENST00000493875 LAS1LQ9Y4W2 734 aaKnown RBP12.43□□□□□ -0.42
GAD1-216ENST00000493875 TNNT2P45379 298 aaPredicted RBP12.43□□□□□ -0.42
GAD1-216ENST00000493875 WDR97A6NE52 1622 aa12.42□□□□□ -0.42
GAD1-216ENST00000493875 ERCC6Q03468 1493 aa12.41□□□□□ -0.42
GAD1-216ENST00000493875 KNSTRNQ9Y448 316 aa12.41□□□□□ -0.42
GAD1-216ENST00000493875 ST20-MTHFSA0A0A6YYL1 179 aa12.41□□□□□ -0.42
GAD1-216ENST00000493875 ARXQ96QS3 562 aa12.4□□□□□ -0.42
GAD1-216ENST00000493875 RGS3P49796 1198 aa12.39□□□□□ -0.43
GAD1-216ENST00000493875 NOP58Q9Y2X3 529 aaKnown RBP12.39□□□□□ -0.43
GAD1-216ENST00000493875 GAPVD1Q14C86 1478 aa12.39□□□□□ -0.43
GAD1-216ENST00000493875 AQRO60306 1485 aaKnown RBP eCLIP12.38□□□□□ -0.433e-6■■■■■ 29.5
GAD1-216ENST00000493875 MYOM3Q5VTT5 1437 aa12.38□□□□□ -0.43
GAD1-216ENST00000493875 UACAQ9BZF9 1416 aa12.38□□□□□ -0.43
GAD1-216ENST00000493875 JPH4Q96JJ6 628 aa12.37□□□□□ -0.43
GAD1-216ENST00000493875 NCOA2Q15596 1464 aa12.37□□□□□ -0.43
GAD1-216ENST00000493875 NBPF8Q3BBV2 869 aa12.37□□□□□ -0.43
GAD1-216ENST00000493875 CASKIN1Q8WXD9 1431 aa12.36□□□□□ -0.43
GAD1-216ENST00000493875 KIF7Q2M1P5 1343 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms