RNA–Protein interactions for RNA: ENST00000493875.5

GAD1-216, Transcript of glutamate decarboxylase 1, humanhuman

TSL 1 (best)

Gene GAD1, Length 3,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAD1-216ENST00000493875 NISCHQ9Y2I1 1504 aa17.25■□□□□ 0.35
GAD1-216ENST00000493875 DCAF8L2P0C7V8 631 aa16.45■□□□□ 0.22
GAD1-216ENST00000493875 SHROOM4Q9ULL8 1493 aa16.2■□□□□ 0.18
GAD1-216ENST00000493875 SUPT5HO00267 1087 aaKnown RBP16.2■□□□□ 0.18
GAD1-216ENST00000493875 EHMT2Q96KQ7 1210 aa15.47■□□□□ 0.07
GAD1-216ENST00000493875 PCGF6Q9BYE7 350 aa15.29■□□□□ 0.04
GAD1-216ENST00000493875 FAM9AQ8IZU1 332 aaPredicted RBP15.19■□□□□ 0.02
GAD1-216ENST00000493875 CHIC1Q5VXU3 224 aa14.98□□□□□ -0.01
GAD1-216ENST00000493875 LOC105371045A0A1W2PR82 267 aa14.95□□□□□ -0.02
GAD1-216ENST00000493875 TTBK1Q5TCY1 1321 aaPredicted RBP14.93□□□□□ -0.02
GAD1-216ENST00000493875 TRIM41Q8WV44 630 aa14.86□□□□□ -0.03
GAD1-216ENST00000493875 PPARGC1BQ86YN6 1023 aaKnown RBP14.8□□□□□ -0.04
GAD1-216ENST00000493875 HRCP23327 699 aa14.78□□□□□ -0.04
GAD1-216ENST00000493875 RANGAP1P46060 587 aaPredicted RBP14.6□□□□□ -0.07
GAD1-216ENST00000493875 TRIM26Q12899 539 aaPredicted RBP14.58□□□□□ -0.08
GAD1-216ENST00000493875 CCER1Q8TC90 406 aaPredicted RBP14.53□□□□□ -0.08
GAD1-216ENST00000493875 UBTFP17480 764 aaKnown RBP14.44□□□□□ -0.1
GAD1-216ENST00000493875 ZEB1P37275 1124 aaPredicted RBP14.43□□□□□ -0.1
GAD1-216ENST00000493875 ZCCHC6Q5VYS8 1495 aaKnown RBP14.41□□□□□ -0.1
GAD1-216ENST00000493875 APLP2Q06481 763 aa14.41□□□□□ -0.1
GAD1-216ENST00000493875 MYO15BQ96JP2 1530 aa14.37□□□□□ -0.11
GAD1-216ENST00000493875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.31□□□□□ -0.12
GAD1-216ENST00000493875 ABCC9O60706 1549 aa14.3□□□□□ -0.12
GAD1-216ENST00000493875 YTHDC1Q96MU7 727 aaKnown RBP14.25□□□□□ -0.13
GAD1-216ENST00000493875 HNRNPUL2Q1KMD3 747 aaKnown RBP14.16□□□□□ -0.14
GAD1-216ENST00000493875 CENPBP07199 599 aaPredicted RBP14.15□□□□□ -0.14
GAD1-216ENST00000493875 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
GAD1-216ENST00000493875 ATP1B4Q9UN42 357 aaPredicted RBP14.11□□□□□ -0.15
GAD1-216ENST00000493875 SCRIBQ14160 1630 aa14.07□□□□□ -0.16
GAD1-216ENST00000493875 ITGAEP38570 1179 aa14.04□□□□□ -0.16
GAD1-216ENST00000493875 CCDC180Q9P1Z9 1646 aa14.02□□□□□ -0.16
GAD1-216ENST00000493875 DCAF1Q9Y4B6 1507 aa13.99□□□□□ -0.17
GAD1-216ENST00000493875 DIEXFQ68CQ4 756 aaKnown RBP13.98□□□□□ -0.17
GAD1-216ENST00000493875 RSF1Q96T23 1441 aaPredicted RBP13.91□□□□□ -0.18
GAD1-216ENST00000493875 PELP1Q8IZL8 1130 aaKnown RBP13.84□□□□□ -0.19
GAD1-216ENST00000493875 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.19
GAD1-216ENST00000493875 GTF3C3Q9Y5Q9 886 aa13.81□□□□□ -0.2
GAD1-216ENST00000493875 CECR2Q9BXF3 1484 aa13.73□□□□□ -0.21
GAD1-216ENST00000493875 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
GAD1-216ENST00000493875 ACIN1Q9UKV3 1341 aaKnown RBP13.7□□□□□ -0.22
GAD1-216ENST00000493875 ZNF316A6NFI3 1004 aaPredicted RBP13.69□□□□□ -0.22
GAD1-216ENST00000493875 NEUROD1Q13562 356 aa13.67□□□□□ -0.22
GAD1-216ENST00000493875 FAM50AQ14320 339 aaKnown RBP13.63□□□□□ -0.23
GAD1-216ENST00000493875 RB1CC1Q8TDY2 1594 aa13.62□□□□□ -0.23
GAD1-216ENST00000493875 CNGB1Q14028 1251 aaPredicted RBP13.61□□□□□ -0.23
GAD1-216ENST00000493875 P3H3Q8IVL6 736 aa13.61□□□□□ -0.23
GAD1-216ENST00000493875 NEFLP07196 543 aa13.55□□□□□ -0.24
GAD1-216ENST00000493875 MROH2BQ7Z745 1585 aa13.53□□□□□ -0.24
GAD1-216ENST00000493875 CEP162Q5TB80 1403 aa13.53□□□□□ -0.24
GAD1-216ENST00000493875 BCANQ96GW7 911 aa13.52□□□□□ -0.24
GAD1-216ENST00000493875 MIER1Q8N108 512 aa13.5□□□□□ -0.25
GAD1-216ENST00000493875 POLR3GLQ9BT43 218 aa13.49□□□□□ -0.25
GAD1-216ENST00000493875 SOGA1O94964 1423 aa13.48□□□□□ -0.25
GAD1-216ENST00000493875 ARID3CA6NKF2 412 aa13.43□□□□□ -0.26
GAD1-216ENST00000493875 CLIP1P30622 1438 aa13.42□□□□□ -0.26
GAD1-216ENST00000493875 ABCC8Q09428 1581 aa13.42□□□□□ -0.26
GAD1-216ENST00000493875 NACADO15069 1562 aa13.41□□□□□ -0.26
GAD1-216ENST00000493875 CCDC88BA6NC98 1476 aa13.4□□□□□ -0.26
GAD1-216ENST00000493875 ERICH6Q7L0X2 663 aa13.4□□□□□ -0.26
GAD1-216ENST00000493875 WRNQ14191 1432 aaPredicted RBP eCLIP13.37□□□□□ -0.27
GAD1-216ENST00000493875 TRIM52Q96A61 297 aa13.37□□□□□ -0.27
GAD1-216ENST00000493875 TNIKQ9UKE5 1360 aa13.37□□□□□ -0.27
GAD1-216ENST00000493875 HIRIP3Q9BW71 556 aaPredicted RBP13.37□□□□□ -0.27
GAD1-216ENST00000493875 WIZO95785 1651 aa13.36□□□□□ -0.27
GAD1-216ENST00000493875 DDX10Q13206 875 aaKnown RBP13.33□□□□□ -0.28
GAD1-216ENST00000493875 GOLGA3Q08378 1498 aa13.33□□□□□ -0.28
GAD1-216ENST00000493875 BAZ1AQ9NRL2 1556 aaPredicted RBP13.32□□□□□ -0.28
GAD1-216ENST00000493875 RUSC2Q8N2Y8 1516 aa13.26□□□□□ -0.29
GAD1-216ENST00000493875 ANP32CO43423 234 aa13.26□□□□□ -0.29
GAD1-216ENST00000493875 EEA1Q15075 1411 aa13.26□□□□□ -0.29
GAD1-216ENST00000493875 ZNF326Q5BKZ1 582 aaKnown RBP13.25□□□□□ -0.29
GAD1-216ENST00000493875 MYT1Q01538 1121 aa13.22□□□□□ -0.29
GAD1-216ENST00000493875 CHIC2Q9UKJ5 165 aa13.21□□□□□ -0.3
GAD1-216ENST00000493875 BAZ1BQ9UIG0 1483 aaKnown RBP13.2□□□□□ -0.3
GAD1-216ENST00000493875 FKBP8Q14318 412 aa13.2□□□□□ -0.3
GAD1-216ENST00000493875 KANK4Q5T7N3 995 aaPredicted RBP13.2□□□□□ -0.3
GAD1-216ENST00000493875 CEP164Q9UPV0 1460 aa13.2□□□□□ -0.3
GAD1-216ENST00000493875 FBLN2P98095 1184 aa13.18□□□□□ -0.3
GAD1-216ENST00000493875 SIN3AQ96ST3 1273 aa13.17□□□□□ -0.3
GAD1-216ENST00000493875 TONSLQ96HA7 1378 aa13.11□□□□□ -0.31
GAD1-216ENST00000493875 ZNF777Q9ULD5 760 aaPredicted RBP13.11□□□□□ -0.31
GAD1-216ENST00000493875 MYT1LQ9UL68 1186 aa13.09□□□□□ -0.31
GAD1-216ENST00000493875 IRX6P78412 446 aaPredicted RBP13.09□□□□□ -0.31
GAD1-216ENST00000493875 HNRNPUQ00839 825 aaKnown RBP eCLIP13.09□□□□□ -0.31
GAD1-216ENST00000493875 VPS8Q8N3P4 1428 aa13.09□□□□□ -0.31
GAD1-216ENST00000493875 TOP2AP11388 1531 aaKnown RBP13.08□□□□□ -0.31
GAD1-216ENST00000493875 RRP7BPQ9NSQ0 103 aa13.07□□□□□ -0.32
GAD1-216ENST00000493875 KIF27Q86VH2 1401 aa13.06□□□□□ -0.32
GAD1-216ENST00000493875 SENP3-EIF4A1A0A087X0R7 540 aa13.06□□□□□ -0.32
GAD1-216ENST00000493875 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
GAD1-216ENST00000493875 FAM9BQ8IZU0 186 aa13.05□□□□□ -0.32
GAD1-216ENST00000493875 MTUS2Q5JR59 1369 aa13.04□□□□□ -0.32
GAD1-216ENST00000493875 CCNB3Q8WWL7 1395 aa13.02□□□□□ -0.33
GAD1-216ENST00000493875 SMARCA4P51532 1647 aa13□□□□□ -0.33
GAD1-216ENST00000493875 CDK11AQ9UQ88 783 aaPredicted RBP12.99□□□□□ -0.33
GAD1-216ENST00000493875 KCNH8Q96L42 1107 aa12.98□□□□□ -0.33
GAD1-216ENST00000493875 SUPT16HQ9Y5B9 1047 aaKnown RBP12.98□□□□□ -0.33
GAD1-216ENST00000493875 CUX2O14529 1486 aa12.97□□□□□ -0.33
GAD1-216ENST00000493875 SMARCA2P51531 1590 aa12.96□□□□□ -0.34
GAD1-216ENST00000493875 SALL2Q9Y467 1007 aaPredicted RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms