RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 ERICH6Q7L0X2 663 aa9.61□□□□□ -0.87
EWSR1-220ENST00000493426 ERICH6BQ5W0A0 696 aa9.6□□□□□ -0.87
EWSR1-220ENST00000493426 TIMELESSQ9UNS1 1208 aa9.6□□□□□ -0.87
EWSR1-220ENST00000493426 RRBP1Q9P2E9 1410 aaKnown RBP9.58□□□□□ -0.88
EWSR1-220ENST00000493426 NCAPD3P42695 1498 aa9.58□□□□□ -0.88
EWSR1-220ENST00000493426 RUSC2Q8N2Y8 1516 aa9.57□□□□□ -0.88
EWSR1-220ENST00000493426 APLP2Q06481 763 aa9.57□□□□□ -0.88
EWSR1-220ENST00000493426 ATAD2BQ9ULI0 1458 aa9.55□□□□□ -0.88
EWSR1-220ENST00000493426 NEFLP07196 543 aa9.55□□□□□ -0.88
EWSR1-220ENST00000493426 FKBP8Q14318 412 aa9.55□□□□□ -0.88
EWSR1-220ENST00000493426 PRKCSHP14314 528 aaPredicted RBP9.54□□□□□ -0.88
EWSR1-220ENST00000493426 HMGXB3Q12766 1538 aa9.54□□□□□ -0.88
EWSR1-220ENST00000493426 PPP1R15AO75807 674 aaPredicted RBP9.52□□□□□ -0.89
EWSR1-220ENST00000493426 SLC4A2P04920 1241 aa9.47□□□□□ -0.89
EWSR1-220ENST00000493426 ERICH3Q5RHP9 1530 aa9.46□□□□□ -0.89
EWSR1-220ENST00000493426 FOXD4L1Q9NU39 408 aa9.46□□□□□ -0.9
EWSR1-220ENST00000493426 CDK11AQ9UQ88 783 aaPredicted RBP9.46□□□□□ -0.9
EWSR1-220ENST00000493426 KCNH8Q96L42 1107 aa9.45□□□□□ -0.9
EWSR1-220ENST00000493426 MAP3K1Q13233 1512 aa9.45□□□□□ -0.9
EWSR1-220ENST00000493426 RNF39Q9H2S5 420 aa9.44□□□□□ -0.9
EWSR1-220ENST00000493426 RAPGEF2Q9Y4G8 1499 aa9.43□□□□□ -0.9
EWSR1-220ENST00000493426 CCNB3Q8WWL7 1395 aa9.43□□□□□ -0.9
EWSR1-220ENST00000493426 MAPKBP1O60336 1514 aa9.42□□□□□ -0.9
EWSR1-220ENST00000493426 PRXQ9BXM0 1461 aa9.42□□□□□ -0.9
EWSR1-220ENST00000493426 BCANQ96GW7 911 aa9.42□□□□□ -0.9
EWSR1-220ENST00000493426 C1QBPQ07021 282 aaKnown RBP9.41□□□□□ -0.9
EWSR1-220ENST00000493426 SYNJ1O43426 1573 aa9.41□□□□□ -0.9
EWSR1-220ENST00000493426 ARAP1Q96P48 1450 aa9.4□□□□□ -0.9
EWSR1-220ENST00000493426 ANP32CO43423 234 aa9.4□□□□□ -0.9
EWSR1-220ENST00000493426 DEKP35659 375 aaKnown RBP9.4□□□□□ -0.9
EWSR1-220ENST00000493426 PPP4R2Q9NY27 417 aa9.39□□□□□ -0.91
EWSR1-220ENST00000493426 MYCNP04198 464 aaPredicted RBP9.38□□□□□ -0.91
EWSR1-220ENST00000493426 DDX10Q13206 875 aaKnown RBP9.38□□□□□ -0.91
EWSR1-220ENST00000493426 SETD5Q9C0A6 1442 aa9.38□□□□□ -0.91
EWSR1-220ENST00000493426 KANK4Q5T7N3 995 aaPredicted RBP9.37□□□□□ -0.91
EWSR1-220ENST00000493426 RAB3GAP2Q9H2M9 1393 aa9.37□□□□□ -0.91
EWSR1-220ENST00000493426 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.37□□□□□ -0.916e-6■□□□□ 11
EWSR1-220ENST00000493426 U3KPZ7 1027 aaPredicted RBP9.36□□□□□ -0.91
EWSR1-220ENST00000493426 TOP2BQ02880 1626 aa9.35□□□□□ -0.91
EWSR1-220ENST00000493426 LAMC3Q9Y6N6 1575 aa9.35□□□□□ -0.91
EWSR1-220ENST00000493426 SAMD1Q6SPF0 538 aaPredicted RBP9.33□□□□□ -0.92
EWSR1-220ENST00000493426 WDR97A6NE52 1622 aa9.33□□□□□ -0.92
EWSR1-220ENST00000493426 BIVM-ERCC5R4GMW8 1640 aa9.33□□□□□ -0.92
EWSR1-220ENST00000493426 ITGAEP38570 1179 aa9.32□□□□□ -0.92
EWSR1-220ENST00000493426 CFTRP13569 1480 aa9.32□□□□□ -0.92
EWSR1-220ENST00000493426 NOP58Q9Y2X3 529 aaKnown RBP9.31□□□□□ -0.92
EWSR1-220ENST00000493426 ZBTB22O15209 634 aa9.3□□□□□ -0.92
EWSR1-220ENST00000493426 C11orf95C9JLR9 678 aaPredicted RBP9.29□□□□□ -0.92
EWSR1-220ENST00000493426 CACNB1Q02641 598 aaPredicted RBP9.29□□□□□ -0.92
EWSR1-220ENST00000493426 TRIM52Q96A61 297 aa9.29□□□□□ -0.92
EWSR1-220ENST00000493426 FHAD1B1AJZ9 1412 aa9.28□□□□□ -0.92
EWSR1-220ENST00000493426 WASHC2AQ641Q2 1341 aa9.28□□□□□ -0.92
EWSR1-220ENST00000493426 ERCC6Q03468 1493 aa9.28□□□□□ -0.92
EWSR1-220ENST00000493426 NESP48681 1621 aa9.27□□□□□ -0.92
EWSR1-220ENST00000493426 USP35Q9P2H5 1018 aa9.27□□□□□ -0.93
EWSR1-220ENST00000493426 PRDM2Q13029 1718 aa9.26□□□□□ -0.93
EWSR1-220ENST00000493426 ARHGAP35Q9NRY4 1499 aa9.26□□□□□ -0.93
EWSR1-220ENST00000493426 RNF123Q5XPI4 1314 aa9.26□□□□□ -0.93
EWSR1-220ENST00000493426 CADPSQ9ULU8 1353 aa9.24□□□□□ -0.93
EWSR1-220ENST00000493426 THOC2Q8NI27 1593 aaKnown RBP9.24□□□□□ -0.93
EWSR1-220ENST00000493426 PDS5BQ9NTI5 1447 aa9.24□□□□□ -0.93
EWSR1-220ENST00000493426 IPO9Q96P70 1041 aaKnown RBP9.24□□□□□ -0.93
EWSR1-220ENST00000493426 SIN3AQ96ST3 1273 aa9.24□□□□□ -0.93
EWSR1-220ENST00000493426 UBE2Q2Q8WVN8 375 aa9.23□□□□□ -0.93
EWSR1-220ENST00000493426 TIAM1Q13009 1591 aa9.23□□□□□ -0.93
EWSR1-220ENST00000493426 ZBED9Q6R2W3 1325 aa9.23□□□□□ -0.93
EWSR1-220ENST00000493426 WASHC2CQ9Y4E1 1318 aa9.23□□□□□ -0.93
EWSR1-220ENST00000493426 KIF27Q86VH2 1401 aa9.22□□□□□ -0.93
EWSR1-220ENST00000493426 LRRC9Q6ZRR7 1453 aa9.22□□□□□ -0.93
EWSR1-220ENST00000493426 HNRNPUQ00839 825 aaKnown RBP eCLIP9.22□□□□□ -0.93
EWSR1-220ENST00000493426 ANO8Q9HCE9 1232 aaPredicted RBP9.22□□□□□ -0.93
EWSR1-220ENST00000493426 KIF21AQ7Z4S6 1674 aa9.22□□□□□ -0.93
EWSR1-220ENST00000493426 NCOA2Q15596 1464 aa9.21□□□□□ -0.93
EWSR1-220ENST00000493426 CUX1P39880 1505 aa9.2□□□□□ -0.94
EWSR1-220ENST00000493426 PAK3O75914 559 aaPredicted RBP9.19□□□□□ -0.94
EWSR1-220ENST00000493426 ATXN8OSP0DMR3 200 aa9.19□□□□□ -0.94
EWSR1-220ENST00000493426 ANP32AP39687 249 aaKnown RBP9.18□□□□□ -0.94
EWSR1-220ENST00000493426 RTL5Q5HYW3 569 aaPredicted RBP9.18□□□□□ -0.94
EWSR1-220ENST00000493426 SMG6Q86US8 1419 aaKnown RBP9.18□□□□□ -0.94
EWSR1-220ENST00000493426 ZBTB47Q9UFB7 747 aaPredicted RBP9.18□□□□□ -0.94
EWSR1-220ENST00000493426 UACAQ9BZF9 1416 aa9.17□□□□□ -0.94
EWSR1-220ENST00000493426 PHLDB1Q86UU1 1377 aa9.17□□□□□ -0.94
EWSR1-220ENST00000493426 TONSLQ96HA7 1378 aa9.17□□□□□ -0.94
EWSR1-220ENST00000493426 KDM5BQ9UGL1 1544 aa9.16□□□□□ -0.94
EWSR1-220ENST00000493426 CAPN15O75808 1086 aa9.16□□□□□ -0.94
EWSR1-220ENST00000493426 WDR62O43379 1518 aa9.15□□□□□ -0.94
EWSR1-220ENST00000493426 AQRO60306 1485 aaKnown RBP eCLIP9.15□□□□□ -0.944e-8■■■□□ 15.5
EWSR1-220ENST00000493426 MRC2Q9UBG0 1479 aa9.15□□□□□ -0.94
EWSR1-220ENST00000493426 ZNF219Q9P2Y4 722 aaPredicted RBP9.15□□□□□ -0.94
EWSR1-220ENST00000493426 SALL2Q9Y467 1007 aaPredicted RBP9.15□□□□□ -0.94
EWSR1-220ENST00000493426 HFM1A2PYH4 1435 aa9.14□□□□□ -0.95
EWSR1-220ENST00000493426 CNTLNQ9NXG0 1405 aa9.14□□□□□ -0.95
EWSR1-220ENST00000493426 PPM1GO15355 546 aaPredicted RBP9.14□□□□□ -0.95
EWSR1-220ENST00000493426 B4GALNT3Q6L9W6 998 aa9.14□□□□□ -0.95
EWSR1-220ENST00000493426 MS4A1P11836 297 aa9.13□□□□□ -0.95
EWSR1-220ENST00000493426 CCDC136Q96JN2 1154 aa9.13□□□□□ -0.95
EWSR1-220ENST00000493426 PRKRIP1Q9H875 184 aaPredicted RBP9.13□□□□□ -0.95
EWSR1-220ENST00000493426 FANCD2Q9BXW9 1451 aa9.12□□□□□ -0.95
EWSR1-220ENST00000493426 CFAP43Q8NDM7 1665 aa9.11□□□□□ -0.95
EWSR1-220ENST00000493426 TCERG1O14776 1098 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms