RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-218ENST00000493339 CCER2I3L3R5 266 aa18.46■□□□□ 0.55
PTK7-218ENST00000493339 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
PTK7-218ENST00000493339 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
PTK7-218ENST00000493339 MAPKBP1O60336 1514 aa18.43■□□□□ 0.54
PTK7-218ENST00000493339 NCBP3Q53F19 620 aaKnown RBP18.43■□□□□ 0.54
PTK7-218ENST00000493339 CUX2O14529 1486 aa18.42■□□□□ 0.54
PTK7-218ENST00000493339 HNRNPUQ00839 825 aaKnown RBP eCLIP18.41■□□□□ 0.54
PTK7-218ENST00000493339 NBR1Q14596 966 aa18.36■□□□□ 0.53
PTK7-218ENST00000493339 MYT1LQ9UL68 1186 aa18.35■□□□□ 0.53
PTK7-218ENST00000493339 FAM50AQ14320 339 aaKnown RBP18.3■□□□□ 0.52
PTK7-218ENST00000493339 SETD5Q9C0A6 1442 aa18.3■□□□□ 0.52
PTK7-218ENST00000493339 PABPN1Q86U42 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
PTK7-218ENST00000493339 ANO8Q9HCE9 1232 aaPredicted RBP18.3■□□□□ 0.52
PTK7-218ENST00000493339 B4GALNT3Q6L9W6 998 aa18.27■□□□□ 0.51
PTK7-218ENST00000493339 PPP4R2Q9NY27 417 aa18.25■□□□□ 0.51
PTK7-218ENST00000493339 NOP58Q9Y2X3 529 aaKnown RBP18.24■□□□□ 0.51
PTK7-218ENST00000493339 AMER1Q5JTC6 1135 aaPredicted RBP18.23■□□□□ 0.51
PTK7-218ENST00000493339 PRXQ9BXM0 1461 aa18.23■□□□□ 0.51
PTK7-218ENST00000493339 PAK3O75914 559 aaPredicted RBP18.23■□□□□ 0.51
PTK7-218ENST00000493339 ERICH3Q5RHP9 1530 aa18.2■□□□□ 0.5
PTK7-218ENST00000493339 TIMELESSQ9UNS1 1208 aa18.19■□□□□ 0.5
PTK7-218ENST00000493339 ARHGAP35Q9NRY4 1499 aa18.16■□□□□ 0.5
PTK7-218ENST00000493339 TONSLQ96HA7 1378 aa18.16■□□□□ 0.5
PTK7-218ENST00000493339 SALL2Q9Y467 1007 aaPredicted RBP18.15■□□□□ 0.5
PTK7-218ENST00000493339 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
PTK7-218ENST00000493339 PHLDB1Q86UU1 1377 aa18.14■□□□□ 0.49
PTK7-218ENST00000493339 ERICH6BQ5W0A0 696 aa18.14■□□□□ 0.49
PTK7-218ENST00000493339 KCNA4P22459 653 aa18.13■□□□□ 0.49
PTK7-218ENST00000493339 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
PTK7-218ENST00000493339 TOP2BQ02880 1626 aa18.12■□□□□ 0.49
PTK7-218ENST00000493339 RTL5Q5HYW3 569 aaPredicted RBP18.11■□□□□ 0.49
PTK7-218ENST00000493339 CCDC184Q52MB2 194 aa18.1■□□□□ 0.49
PTK7-218ENST00000493339 FAM9BQ8IZU0 186 aa18.1■□□□□ 0.49
PTK7-218ENST00000493339 CCDC136Q96JN2 1154 aa18.09■□□□□ 0.49
PTK7-218ENST00000493339 IL27Q8NEV9 243 aa18.06■□□□□ 0.48
PTK7-218ENST00000493339 ANP32AP39687 249 aaKnown RBP18.04■□□□□ 0.48
PTK7-218ENST00000493339 TIAM1Q13009 1591 aa18.03■□□□□ 0.48
PTK7-218ENST00000493339 KIF27Q86VH2 1401 aa18.03■□□□□ 0.48
PTK7-218ENST00000493339 LRRC9Q6ZRR7 1453 aa18.02■□□□□ 0.48
PTK7-218ENST00000493339 UNC13AQ9UPW8 1703 aa18.02■□□□□ 0.48
PTK7-218ENST00000493339 WASHC2AQ641Q2 1341 aa18.01■□□□□ 0.47
PTK7-218ENST00000493339 P3H3Q8IVL6 736 aa18.01■□□□□ 0.47
PTK7-218ENST00000493339 ZBTB47Q9UFB7 747 aaPredicted RBP18.01■□□□□ 0.47
PTK7-218ENST00000493339 IPO9Q96P70 1041 aaKnown RBP18■□□□□ 0.47
PTK7-218ENST00000493339 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
PTK7-218ENST00000493339 MRS2Q9HD23 443 aa18■□□□□ 0.47
PTK7-218ENST00000493339 ATAD2BQ9ULI0 1458 aa17.98■□□□□ 0.47
PTK7-218ENST00000493339 HSPA5P11021 654 aaKnown RBP17.98■□□□□ 0.47
PTK7-218ENST00000493339 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.97■□□□□ 0.47
PTK7-218ENST00000493339 BIVM-ERCC5R4GMW8 1640 aa17.96■□□□□ 0.47
PTK7-218ENST00000493339 ZBED9Q6R2W3 1325 aa17.94■□□□□ 0.46
PTK7-218ENST00000493339 CNGB1Q14028 1251 aaPredicted RBP17.93■□□□□ 0.46
PTK7-218ENST00000493339 FHAD1B1AJZ9 1412 aa17.92■□□□□ 0.46
PTK7-218ENST00000493339 SENP3-EIF4A1A0A087X0R7 540 aa17.91■□□□□ 0.46
PTK7-218ENST00000493339 NPM2Q86SE8 214 aaKnown RBP17.91■□□□□ 0.46
PTK7-218ENST00000493339 PRKRIP1Q9H875 184 aaPredicted RBP17.91■□□□□ 0.46
PTK7-218ENST00000493339 MAP3K1Q13233 1512 aa17.9■□□□□ 0.46
PTK7-218ENST00000493339 AKNAQ7Z591 1439 aa17.88■□□□□ 0.45
PTK7-218ENST00000493339 LAS1LQ9Y4W2 734 aaKnown RBP17.88■□□□□ 0.45
PTK7-218ENST00000493339 CUX1P39880 1505 aa17.88■□□□□ 0.45
PTK7-218ENST00000493339 CCDC18Q5T9S5 1454 aa17.88■□□□□ 0.45
PTK7-218ENST00000493339 EIF4G2P78344 907 aaKnown RBP eCLIP17.88■□□□□ 0.45
PTK7-218ENST00000493339 CNTLNQ9NXG0 1405 aa17.85■□□□□ 0.45
PTK7-218ENST00000493339 C11orf95C9JLR9 678 aaPredicted RBP17.85■□□□□ 0.45
PTK7-218ENST00000493339 NEFMP07197 916 aa17.84■□□□□ 0.45
PTK7-218ENST00000493339 UACAQ9BZF9 1416 aa17.83■□□□□ 0.44
PTK7-218ENST00000493339 BICRAQ9NZM4 1560 aa17.82■□□□□ 0.44
PTK7-218ENST00000493339 IGF1RP08069 1367 aa17.8■□□□□ 0.44
PTK7-218ENST00000493339 AQRO60306 1485 aaKnown RBP eCLIP17.79■□□□□ 0.443e-7■■■■■ 31
PTK7-218ENST00000493339 PCF11O94913 1555 aaKnown RBP17.78■□□□□ 0.44
PTK7-218ENST00000493339 KDM5BQ9UGL1 1544 aa17.78■□□□□ 0.44
PTK7-218ENST00000493339 PTPRKQ15262 1439 aa17.78■□□□□ 0.44
PTK7-218ENST00000493339 NUDCQ9Y266 331 aa17.77■□□□□ 0.44
PTK7-218ENST00000493339 CARMIL1Q5VZK9 1371 aa17.77■□□□□ 0.43
PTK7-218ENST00000493339 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
PTK7-218ENST00000493339 CCDC7Q96M83 1385 aa17.76■□□□□ 0.43
PTK7-218ENST00000493339 FHOD3Q2V2M9 1422 aa17.75■□□□□ 0.43
PTK7-218ENST00000493339 FGD6Q6ZV73 1430 aa17.75■□□□□ 0.43
PTK7-218ENST00000493339 HFM1A2PYH4 1435 aa17.75■□□□□ 0.43
PTK7-218ENST00000493339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.74■□□□□ 0.43
PTK7-218ENST00000493339 SMG6Q86US8 1419 aaKnown RBP17.74■□□□□ 0.43
PTK7-218ENST00000493339 RRP7BPQ9NSQ0 103 aa17.73■□□□□ 0.43
PTK7-218ENST00000493339 POLR3GLQ9BT43 218 aa17.73■□□□□ 0.43
PTK7-218ENST00000493339 CFAP43Q8NDM7 1665 aa17.72■□□□□ 0.43
PTK7-218ENST00000493339 EIF5BO60841 1220 aaKnown RBP17.72■□□□□ 0.43
PTK7-218ENST00000493339 CHIC2Q9UKJ5 165 aa17.72■□□□□ 0.43
PTK7-218ENST00000493339 BRPF3Q9ULD4 1205 aa17.72■□□□□ 0.43
PTK7-218ENST00000493339 L3MBTL2Q969R5 705 aa17.71■□□□□ 0.43
PTK7-218ENST00000493339 NAIPQ13075 1403 aa17.71■□□□□ 0.43
PTK7-218ENST00000493339 PTPN23Q9H3S7 1636 aa17.7■□□□□ 0.42
PTK7-218ENST00000493339 FOXD1Q16676 465 aa17.7■□□□□ 0.42
PTK7-218ENST00000493339 NCOA1Q15788 1441 aa17.69■□□□□ 0.42
PTK7-218ENST00000493339 MTUS2Q5JR59 1369 aa17.68■□□□□ 0.42
PTK7-218ENST00000493339 USP35Q9P2H5 1018 aa17.68■□□□□ 0.42
PTK7-218ENST00000493339 FMN1Q68DA7 1419 aa17.68■□□□□ 0.42
PTK7-218ENST00000493339 KIF7Q2M1P5 1343 aa17.68■□□□□ 0.42
PTK7-218ENST00000493339 RNF123Q5XPI4 1314 aa17.68■□□□□ 0.42
PTK7-218ENST00000493339 PDE4AP27815 886 aa17.67■□□□□ 0.42
PTK7-218ENST00000493339 UBE2Q2Q8WVN8 375 aa17.67■□□□□ 0.42
PTK7-218ENST00000493339 NCAPD3P42695 1498 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms