RNA–Protein interactions for RNA: ENST00000491674.1

FXR1-221, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-221ENST00000491674 CEP170Q5SW79 1584 aa26.02■■□□□ 1.76
FXR1-221ENST00000491674 KIAA0586Q9BVV6 1533 aa26■■□□□ 1.75
FXR1-221ENST00000491674 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
FXR1-221ENST00000491674 JPH4Q96JJ6 628 aa25.92■■□□□ 1.74
FXR1-221ENST00000491674 LOC105371045A0A1W2PR82 267 aa25.91■■□□□ 1.74
FXR1-221ENST00000491674 IQGAP2Q13576 1575 aa25.87■■□□□ 1.73
FXR1-221ENST00000491674 TNIKQ9UKE5 1360 aa25.85■■□□□ 1.73
FXR1-221ENST00000491674 CTTNBP2Q8WZ74 1663 aa25.82■■□□□ 1.72
FXR1-221ENST00000491674 RANGAP1P46060 587 aaPredicted RBP25.79■■□□□ 1.72
FXR1-221ENST00000491674 PRG4Q92954 1404 aaPredicted RBP25.79■■□□□ 1.72
FXR1-221ENST00000491674 DNAJC5Q9H3Z4 198 aa25.78■■□□□ 1.72
FXR1-221ENST00000491674 CARMIL2Q6F5E8 1435 aa25.77■■□□□ 1.72
FXR1-221ENST00000491674 UGGT2Q9NYU1 1516 aa25.76■■□□□ 1.71
FXR1-221ENST00000491674 SHROOM2Q13796 1616 aa25.75■■□□□ 1.71
FXR1-221ENST00000491674 ARHGEF11O15085 1522 aa25.67■■□□□ 1.7
FXR1-221ENST00000491674 DISP1Q96F81 1524 aa25.65■■□□□ 1.7
FXR1-221ENST00000491674 P3H3Q8IVL6 736 aa25.64■■□□□ 1.7
FXR1-221ENST00000491674 CLIP1P30622 1438 aa25.63■■□□□ 1.69
FXR1-221ENST00000491674 EFCAB5A4FU69 1503 aa25.62■■□□□ 1.69
FXR1-221ENST00000491674 CEP162Q5TB80 1403 aa25.62■■□□□ 1.69
FXR1-221ENST00000491674 ERCC6L2Q5T890 1561 aa25.61■■□□□ 1.69
FXR1-221ENST00000491674 KIAA0556O60303 1618 aa25.59■■□□□ 1.69
FXR1-221ENST00000491674 PTPRGP23470 1445 aa25.58■■□□□ 1.69
FXR1-221ENST00000491674 TTBK1Q5TCY1 1321 aaPredicted RBP25.58■■□□□ 1.69
FXR1-221ENST00000491674 SAMD9Q5K651 1589 aa25.57■■□□□ 1.68
FXR1-221ENST00000491674 RIMBP3CA6NJZ7 1639 aa25.57■■□□□ 1.68
FXR1-221ENST00000491674 RIMBP3BA6NNM3 1639 aa25.57■■□□□ 1.68
FXR1-221ENST00000491674 RIMBP3Q9UFD9 1639 aa25.57■■□□□ 1.68
FXR1-221ENST00000491674 ARHGAP35Q9NRY4 1499 aa25.56■■□□□ 1.68
FXR1-221ENST00000491674 FHOD3Q2V2M9 1422 aa25.53■■□□□ 1.68
FXR1-221ENST00000491674 CYB5RLQ6IPT4 315 aa25.51■■□□□ 1.67
FXR1-221ENST00000491674 ARAP1Q96P48 1450 aa25.5■■□□□ 1.67
FXR1-221ENST00000491674 FMN1Q68DA7 1419 aa25.44■■□□□ 1.66
FXR1-221ENST00000491674 UACAQ9BZF9 1416 aa25.39■■□□□ 1.66
FXR1-221ENST00000491674 PLB1Q6P1J6 1458 aa25.34■■□□□ 1.65
FXR1-221ENST00000491674 ATP1B4Q9UN42 357 aaPredicted RBP25.33■■□□□ 1.65
FXR1-221ENST00000491674 NPM1P06748 294 aaKnown RBP eCLIP25.31■■□□□ 1.64
FXR1-221ENST00000491674 UHRF1BP1LA0JNW5 1464 aa25.31■■□□□ 1.64
FXR1-221ENST00000491674 ABCA8O94911 1581 aa25.3■■□□□ 1.64
FXR1-221ENST00000491674 ABCC2Q92887 1545 aa25.28■■□□□ 1.64
FXR1-221ENST00000491674 VPS8Q8N3P4 1428 aa25.28■■□□□ 1.64
FXR1-221ENST00000491674 CASKIN1Q8WXD9 1431 aa25.27■■□□□ 1.64
FXR1-221ENST00000491674 RAPGEF6Q8TEU7 1601 aa25.25■■□□□ 1.63
FXR1-221ENST00000491674 FYCO1Q9BQS8 1478 aa25.21■■□□□ 1.63
FXR1-221ENST00000491674 ARID3CA6NKF2 412 aa25.21■■□□□ 1.63
FXR1-221ENST00000491674 ADCY10Q96PN6 1610 aa25.21■■□□□ 1.63
FXR1-221ENST00000491674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.2■■□□□ 1.62
FXR1-221ENST00000491674 HNRNPUL2Q1KMD3 747 aaKnown RBP25.2■■□□□ 1.62
FXR1-221ENST00000491674 NUP153P49790 1475 aaKnown RBP25.19■■□□□ 1.62
FXR1-221ENST00000491674 HECW1Q76N89 1606 aa25.18■■□□□ 1.62
FXR1-221ENST00000491674 KDM5BQ9UGL1 1544 aa25.17■■□□□ 1.62
FXR1-221ENST00000491674 PCF11O94913 1555 aaKnown RBP25.17■■□□□ 1.62
FXR1-221ENST00000491674 ATP10BO94823 1461 aa25.15■■□□□ 1.62
FXR1-221ENST00000491674 APLP2Q06481 763 aa25.14■■□□□ 1.62
FXR1-221ENST00000491674 CDK11AQ9UQ88 783 aaPredicted RBP25.13■■□□□ 1.61
FXR1-221ENST00000491674 EPRSP07814 1512 aaKnown RBP25.12■■□□□ 1.61
FXR1-221ENST00000491674 CCDC18Q5T9S5 1454 aa25.11■■□□□ 1.61
FXR1-221ENST00000491674 PLEKHD1A6NEE1 506 aa25.08■■□□□ 1.61
FXR1-221ENST00000491674 CDK13Q14004 1512 aaKnown RBP25.06■■□□□ 1.6
FXR1-221ENST00000491674 ZCCHC11Q5TAX3 1644 aaKnown RBP25.05■■□□□ 1.6
FXR1-221ENST00000491674 ASXL2Q76L83 1435 aa25.03■■□□□ 1.6
FXR1-221ENST00000491674 MAPKBP1O60336 1514 aa25.01■■□□□ 1.59
FXR1-221ENST00000491674 MAP3K1Q13233 1512 aa24.97■■□□□ 1.59
FXR1-221ENST00000491674 WDR7Q9Y4E6 1490 aa24.97■■□□□ 1.59
FXR1-221ENST00000491674 MTUS2Q5JR59 1369 aa24.96■■□□□ 1.59
FXR1-221ENST00000491674 KCNH8Q96L42 1107 aa24.96■■□□□ 1.59
FXR1-221ENST00000491674 TROQ12816 1431 aaPredicted RBP24.94■■□□□ 1.58
FXR1-221ENST00000491674 TIAM1Q13009 1591 aa24.93■■□□□ 1.58
FXR1-221ENST00000491674 LRRIQ1Q96JM4 1722 aa24.91■■□□□ 1.58
FXR1-221ENST00000491674 FAM69CQ0P6D2 419 aa24.88■■□□□ 1.57
FXR1-221ENST00000491674 TRHP20396 242 aaPredicted RBP24.87■■□□□ 1.57
FXR1-221ENST00000491674 KANK4Q5T7N3 995 aaPredicted RBP24.87■■□□□ 1.57
FXR1-221ENST00000491674 ABCC10Q5T3U5 1492 aa24.87■■□□□ 1.57
FXR1-221ENST00000491674 CFAP43Q8NDM7 1665 aa24.87■■□□□ 1.57
FXR1-221ENST00000491674 LRRC9Q6ZRR7 1453 aa24.86■■□□□ 1.57
FXR1-221ENST00000491674 EHBP1L1Q8N3D4 1523 aa24.84■■□□□ 1.57
FXR1-221ENST00000491674 MAGI3Q5TCQ9 1506 aa24.83■■□□□ 1.57
FXR1-221ENST00000491674 KIF14Q15058 1648 aa24.78■■□□□ 1.56
FXR1-221ENST00000491674 DIP2BQ9P265 1576 aa24.77■■□□□ 1.56
FXR1-221ENST00000491674 GLI2P10070 1586 aa24.76■■□□□ 1.55
FXR1-221ENST00000491674 PPARGC1BQ86YN6 1023 aaKnown RBP24.75■■□□□ 1.55
FXR1-221ENST00000491674 CD109Q6YHK3 1445 aa24.73■■□□□ 1.55
FXR1-221ENST00000491674 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.72■■□□□ 1.55
FXR1-221ENST00000491674 CCNB3Q8WWL7 1395 aa24.72■■□□□ 1.55
FXR1-221ENST00000491674 NCOA2Q15596 1464 aa24.71■■□□□ 1.55
FXR1-221ENST00000491674 SUPT6HQ7KZ85 1726 aaKnown RBP24.69■■□□□ 1.54
FXR1-221ENST00000491674 ABCA9Q8IUA7 1624 aa24.69■■□□□ 1.54
FXR1-221ENST00000491674 PLCH2O75038 1416 aa24.65■■□□□ 1.54
FXR1-221ENST00000491674 TTC37Q6PGP7 1564 aa24.65■■□□□ 1.54
FXR1-221ENST00000491674 EFCAB2Q5VUJ9 269 aa24.64■■□□□ 1.54
FXR1-221ENST00000491674 CFDP1Q9UEE9 299 aaPredicted RBP24.63■■□□□ 1.53
FXR1-221ENST00000491674 GPATCH8Q9UKJ3 1502 aaKnown RBP24.61■■□□□ 1.53
FXR1-221ENST00000491674 KIF13AQ9H1H9 1805 aa24.61■■□□□ 1.53
FXR1-221ENST00000491674 MAP3K4Q9Y6R4 1608 aa24.61■■□□□ 1.53
FXR1-221ENST00000491674 TEX14Q8IWB6 1497 aa24.59■■□□□ 1.53
FXR1-221ENST00000491674 PHLDB1Q86UU1 1377 aa24.58■■□□□ 1.53
FXR1-221ENST00000491674 MYOM3Q5VTT5 1437 aa24.58■■□□□ 1.53
FXR1-221ENST00000491674 ARHGAP5Q13017 1502 aa24.57■■□□□ 1.52
FXR1-221ENST00000491674 ARAP3Q8WWN8 1544 aa24.57■■□□□ 1.52
FXR1-221ENST00000491674 ZNF777Q9ULD5 760 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms