RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 KIF27Q86VH2 1401 aa22.86■■□□□ 1.25
DNMT3A-214ENST00000491288 KIAA0586Q9BVV6 1533 aa22.83■■□□□ 1.25
DNMT3A-214ENST00000491288 CUL7Q14999 1698 aa22.74■■□□□ 1.23
DNMT3A-214ENST00000491288 CARMIL1Q5VZK9 1371 aa22.72■■□□□ 1.23
DNMT3A-214ENST00000491288 ABCC10Q5T3U5 1492 aa22.72■■□□□ 1.23
DNMT3A-214ENST00000491288 MAPKBP1O60336 1514 aa22.72■■□□□ 1.23
DNMT3A-214ENST00000491288 NPM1P06748 294 aaKnown RBP eCLIP22.68■■□□□ 1.22
DNMT3A-214ENST00000491288 KIF13AQ9H1H9 1805 aa22.67■■□□□ 1.22
DNMT3A-214ENST00000491288 ADCY10Q96PN6 1610 aa22.67■■□□□ 1.22
DNMT3A-214ENST00000491288 FAM69CQ0P6D2 419 aa22.64■■□□□ 1.21
DNMT3A-214ENST00000491288 CHIC1Q5VXU3 224 aa22.64■■□□□ 1.21
DNMT3A-214ENST00000491288 AEBP2Q6ZN18 517 aaPredicted RBP22.62■■□□□ 1.21
DNMT3A-214ENST00000491288 PTPRGP23470 1445 aa22.61■■□□□ 1.21
DNMT3A-214ENST00000491288 DIP2BQ9P265 1576 aa22.59■■□□□ 1.21
DNMT3A-214ENST00000491288 TNIKQ9UKE5 1360 aa22.57■■□□□ 1.2
DNMT3A-214ENST00000491288 CARMIL2Q6F5E8 1435 aa22.56■■□□□ 1.2
DNMT3A-214ENST00000491288 IQGAP2Q13576 1575 aa22.52■■□□□ 1.2
DNMT3A-214ENST00000491288 ABCC2Q92887 1545 aa22.5■■□□□ 1.19
DNMT3A-214ENST00000491288 DISP1Q96F81 1524 aa22.5■■□□□ 1.19
DNMT3A-214ENST00000491288 UHRF1BP1LA0JNW5 1464 aa22.49■■□□□ 1.19
DNMT3A-214ENST00000491288 RAPGEF2Q9Y4G8 1499 aa22.48■■□□□ 1.19
DNMT3A-214ENST00000491288 UGGT2Q9NYU1 1516 aa22.45■■□□□ 1.18
DNMT3A-214ENST00000491288 CSRNP3Q8WYN3 585 aa22.44■■□□□ 1.18
DNMT3A-214ENST00000491288 UACAQ9BZF9 1416 aa22.44■■□□□ 1.18
DNMT3A-214ENST00000491288 PLB1Q6P1J6 1458 aa22.42■■□□□ 1.18
DNMT3A-214ENST00000491288 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
DNMT3A-214ENST00000491288 EEA1Q15075 1411 aa22.41■■□□□ 1.18
DNMT3A-214ENST00000491288 ASXL2Q76L83 1435 aa22.41■■□□□ 1.18
DNMT3A-214ENST00000491288 TTBK1Q5TCY1 1321 aaPredicted RBP22.39■■□□□ 1.18
DNMT3A-214ENST00000491288 GLI2P10070 1586 aa22.38■■□□□ 1.17
DNMT3A-214ENST00000491288 KDM5BQ9UGL1 1544 aa22.38■■□□□ 1.17
DNMT3A-214ENST00000491288 KDM6BO15054 1643 aa22.35■■□□□ 1.17
DNMT3A-214ENST00000491288 KIAA0556O60303 1618 aa22.32■■□□□ 1.16
DNMT3A-214ENST00000491288 PRXQ9BXM0 1461 aa22.3■■□□□ 1.16
DNMT3A-214ENST00000491288 KDM4FA0A1W2PPD8 638 aa22.29■■□□□ 1.16
DNMT3A-214ENST00000491288 EPRSP07814 1512 aaKnown RBP22.29■■□□□ 1.16
DNMT3A-214ENST00000491288 PPRC1Q5VV67 1664 aaKnown RBP22.26■■□□□ 1.15
DNMT3A-214ENST00000491288 TSPOAP1O95153 1857 aa22.24■■□□□ 1.15
DNMT3A-214ENST00000491288 GOLGA3Q08378 1498 aa22.22■■□□□ 1.15
DNMT3A-214ENST00000491288 COL17A1Q9UMD9 1497 aaPredicted RBP22.22■■□□□ 1.15
DNMT3A-214ENST00000491288 ZCCHC11Q5TAX3 1644 aaKnown RBP22.2■■□□□ 1.15
DNMT3A-214ENST00000491288 MAP3K4Q9Y6R4 1608 aa22.2■■□□□ 1.14
DNMT3A-214ENST00000491288 WDR7Q9Y4E6 1490 aa22.19■■□□□ 1.14
DNMT3A-214ENST00000491288 ABCA8O94911 1581 aa22.16■■□□□ 1.14
DNMT3A-214ENST00000491288 CTTNBP2Q8WZ74 1663 aa22.16■■□□□ 1.14
DNMT3A-214ENST00000491288 TEX14Q8IWB6 1497 aa22.15■■□□□ 1.14
DNMT3A-214ENST00000491288 EHMT2Q96KQ7 1210 aa22.12■■□□□ 1.13
DNMT3A-214ENST00000491288 UBTFP17480 764 aaKnown RBP22.11■■□□□ 1.13
DNMT3A-214ENST00000491288 MAGI3Q5TCQ9 1506 aa22.09■■□□□ 1.13
DNMT3A-214ENST00000491288 KIF21BO75037 1637 aa22.08■■□□□ 1.13
DNMT3A-214ENST00000491288 CD109Q6YHK3 1445 aa22.06■■□□□ 1.12
DNMT3A-214ENST00000491288 ADGRL1O94910 1474 aa22.02■■□□□ 1.12
DNMT3A-214ENST00000491288 RANGAP1P46060 587 aaPredicted RBP22.01■■□□□ 1.11
DNMT3A-214ENST00000491288 KCNH8Q96L42 1107 aa22.01■■□□□ 1.11
DNMT3A-214ENST00000491288 ATP10BO94823 1461 aa22.01■■□□□ 1.11
DNMT3A-214ENST00000491288 CFAP43Q8NDM7 1665 aa21.99■■□□□ 1.11
DNMT3A-214ENST00000491288 SAMD9Q5K651 1589 aa21.97■■□□□ 1.11
DNMT3A-214ENST00000491288 P3H3Q8IVL6 736 aa21.96■■□□□ 1.11
DNMT3A-214ENST00000491288 ARAP3Q8WWN8 1544 aa21.91■■□□□ 1.1
DNMT3A-214ENST00000491288 PHLDB1Q86UU1 1377 aa21.89■■□□□ 1.1
DNMT3A-214ENST00000491288 ARID3CA6NKF2 412 aa21.87■■□□□ 1.09
DNMT3A-214ENST00000491288 ABCA9Q8IUA7 1624 aa21.86■■□□□ 1.09
DNMT3A-214ENST00000491288 NUP153P49790 1475 aaKnown RBP21.85■■□□□ 1.09
DNMT3A-214ENST00000491288 RAPGEF6Q8TEU7 1601 aa21.84■■□□□ 1.09
DNMT3A-214ENST00000491288 FHOD3Q2V2M9 1422 aa21.8■■□□□ 1.08
DNMT3A-214ENST00000491288 NEO1Q92859 1461 aa21.8■■□□□ 1.08
DNMT3A-214ENST00000491288 EFCAB5A4FU69 1503 aa21.77■■□□□ 1.08
DNMT3A-214ENST00000491288 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
DNMT3A-214ENST00000491288 RAPGEF3O95398 923 aa21.74■■□□□ 1.07
DNMT3A-214ENST00000491288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
DNMT3A-214ENST00000491288 HNRNPUL2Q1KMD3 747 aaKnown RBP21.73■■□□□ 1.07
DNMT3A-214ENST00000491288 PLEKHD1A6NEE1 506 aa21.72■■□□□ 1.07
DNMT3A-214ENST00000491288 HECW2Q9P2P5 1572 aa21.7■■□□□ 1.06
DNMT3A-214ENST00000491288 FRMPD1Q5SYB0 1578 aa21.67■■□□□ 1.06
DNMT3A-214ENST00000491288 ARHGAP35Q9NRY4 1499 aa21.67■■□□□ 1.06
DNMT3A-214ENST00000491288 ATP1B4Q9UN42 357 aaPredicted RBP21.66■■□□□ 1.06
DNMT3A-214ENST00000491288 CLIP1P30622 1438 aa21.65■■□□□ 1.06
DNMT3A-214ENST00000491288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.64■■□□□ 1.05
DNMT3A-214ENST00000491288 FMN1Q68DA7 1419 aa21.63■■□□□ 1.05
DNMT3A-214ENST00000491288 AKNAQ7Z591 1439 aa21.63■■□□□ 1.05
DNMT3A-214ENST00000491288 ADAMTSL3P82987 1691 aa21.61■■□□□ 1.05
DNMT3A-214ENST00000491288 FANCAO15360 1455 aa21.61■■□□□ 1.05
DNMT3A-214ENST00000491288 DENND4BO75064 1496 aaPredicted RBP21.61■■□□□ 1.05
DNMT3A-214ENST00000491288 ILDR1Q86SU0 546 aaPredicted RBP21.61■■□□□ 1.05
DNMT3A-214ENST00000491288 PTPRMP28827 1452 aa21.6■■□□□ 1.05
DNMT3A-214ENST00000491288 CDK13Q14004 1512 aaKnown RBP21.57■■□□□ 1.04
DNMT3A-214ENST00000491288 TTC37Q6PGP7 1564 aa21.56■■□□□ 1.04
DNMT3A-214ENST00000491288 PLCH2O75038 1416 aa21.55■■□□□ 1.04
DNMT3A-214ENST00000491288 CEP162Q5TB80 1403 aa21.55■■□□□ 1.04
DNMT3A-214ENST00000491288 ZMYM4Q5VZL5 1548 aa21.54■■□□□ 1.04
DNMT3A-214ENST00000491288 ARHGEF40Q8TER5 1519 aa21.54■■□□□ 1.04
DNMT3A-214ENST00000491288 RICTORQ6R327 1708 aa21.53■■□□□ 1.04
DNMT3A-214ENST00000491288 CFAP74Q9C0B2 1584 aa21.53■■□□□ 1.04
DNMT3A-214ENST00000491288 MAGI2Q86UL8 1455 aa21.52■■□□□ 1.04
DNMT3A-214ENST00000491288 BCORL1Q5H9F3 1711 aa21.52■■□□□ 1.03
DNMT3A-214ENST00000491288 CDK11AQ9UQ88 783 aaPredicted RBP21.49■■□□□ 1.03
DNMT3A-214ENST00000491288 ARID4BQ4LE39 1312 aaPredicted RBP21.49■■□□□ 1.03
DNMT3A-214ENST00000491288 YEATS2Q9ULM3 1422 aa21.47■■□□□ 1.03
DNMT3A-214ENST00000491288 HECW1Q76N89 1606 aa21.47■■□□□ 1.03
DNMT3A-214ENST00000491288 POGZQ7Z3K3 1410 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms