RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 KIAA0586Q9BVV6 1533 aa30.28■■■□□ 2.44
MCF2L-230ENST00000491028 UBTFP17480 764 aaKnown RBP30.28■■■□□ 2.44
MCF2L-230ENST00000491028 IQGAP2Q13576 1575 aa30.25■■■□□ 2.43
MCF2L-230ENST00000491028 CLASP1Q7Z460 1538 aa30.25■■■□□ 2.43
MCF2L-230ENST00000491028 TNIKQ9UKE5 1360 aa30.25■■■□□ 2.43
MCF2L-230ENST00000491028 LOC105371045A0A1W2PR82 267 aa30.24■■■□□ 2.43
MCF2L-230ENST00000491028 OSCARQ8IYS5 282 aa30.22■■■□□ 2.43
MCF2L-230ENST00000491028 SHROOM2Q13796 1616 aa30.12■■■□□ 2.41
MCF2L-230ENST00000491028 UGGT2Q9NYU1 1516 aa30.1■■■□□ 2.41
MCF2L-230ENST00000491028 EFCAB5A4FU69 1503 aa30.02■■■□□ 2.4
MCF2L-230ENST00000491028 JPH4Q96JJ6 628 aa30.01■■■□□ 2.39
MCF2L-230ENST00000491028 CEP162Q5TB80 1403 aa30.01■■■□□ 2.39
MCF2L-230ENST00000491028 SAMD9Q5K651 1589 aa30.01■■■□□ 2.39
MCF2L-230ENST00000491028 CLIP1P30622 1438 aa29.96■■■□□ 2.39
MCF2L-230ENST00000491028 KIAA0556O60303 1618 aa29.96■■■□□ 2.39
MCF2L-230ENST00000491028 DISP1Q96F81 1524 aa29.95■■■□□ 2.38
MCF2L-230ENST00000491028 CARMIL2Q6F5E8 1435 aa29.93■■■□□ 2.38
MCF2L-230ENST00000491028 PRG4Q92954 1404 aaPredicted RBP29.93■■■□□ 2.38
MCF2L-230ENST00000491028 ARHGAP35Q9NRY4 1499 aa29.92■■■□□ 2.38
MCF2L-230ENST00000491028 RANGAP1P46060 587 aaPredicted RBP29.9■■■□□ 2.38
MCF2L-230ENST00000491028 ERCC6L2Q5T890 1561 aa29.84■■■□□ 2.37
MCF2L-230ENST00000491028 ARHGEF11O15085 1522 aa29.79■■■□□ 2.36
MCF2L-230ENST00000491028 FHOD3Q2V2M9 1422 aa29.79■■■□□ 2.36
MCF2L-230ENST00000491028 ARAP1Q96P48 1450 aa29.78■■■□□ 2.36
MCF2L-230ENST00000491028 P3H3Q8IVL6 736 aa29.74■■■□□ 2.35
MCF2L-230ENST00000491028 RIMBP3CA6NJZ7 1639 aa29.73■■■□□ 2.35
MCF2L-230ENST00000491028 RIMBP3BA6NNM3 1639 aa29.73■■■□□ 2.35
MCF2L-230ENST00000491028 RIMBP3Q9UFD9 1639 aa29.73■■■□□ 2.35
MCF2L-230ENST00000491028 FMN1Q68DA7 1419 aa29.7■■■□□ 2.34
MCF2L-230ENST00000491028 PTPRGP23470 1445 aa29.66■■■□□ 2.34
MCF2L-230ENST00000491028 VPS8Q8N3P4 1428 aa29.62■■■□□ 2.33
MCF2L-230ENST00000491028 ABCA8O94911 1581 aa29.57■■■□□ 2.32
MCF2L-230ENST00000491028 RAPGEF6Q8TEU7 1601 aa29.56■■■□□ 2.32
MCF2L-230ENST00000491028 PCF11O94913 1555 aaKnown RBP29.56■■■□□ 2.32
MCF2L-230ENST00000491028 TTBK1Q5TCY1 1321 aaPredicted RBP29.54■■■□□ 2.32
MCF2L-230ENST00000491028 FYCO1Q9BQS8 1478 aa29.53■■■□□ 2.32
MCF2L-230ENST00000491028 PLB1Q6P1J6 1458 aa29.52■■■□□ 2.32
MCF2L-230ENST00000491028 CASKIN1Q8WXD9 1431 aa29.52■■■□□ 2.32
MCF2L-230ENST00000491028 UACAQ9BZF9 1416 aa29.52■■■□□ 2.32
MCF2L-230ENST00000491028 HECW1Q76N89 1606 aa29.52■■■□□ 2.32
MCF2L-230ENST00000491028 ABCC2Q92887 1545 aa29.5■■■□□ 2.31
MCF2L-230ENST00000491028 UHRF1BP1LA0JNW5 1464 aa29.48■■■□□ 2.31
MCF2L-230ENST00000491028 ADCY10Q96PN6 1610 aa29.44■■■□□ 2.3
MCF2L-230ENST00000491028 NUP153P49790 1475 aaKnown RBP29.42■■■□□ 2.3
MCF2L-230ENST00000491028 LRRIQ1Q96JM4 1722 aa29.38■■■□□ 2.29
MCF2L-230ENST00000491028 CCDC18Q5T9S5 1454 aa29.37■■■□□ 2.29
MCF2L-230ENST00000491028 CYB5RLQ6IPT4 315 aa29.37■■■□□ 2.29
MCF2L-230ENST00000491028 EPRSP07814 1512 aaKnown RBP29.35■■■□□ 2.29
MCF2L-230ENST00000491028 KDM5BQ9UGL1 1544 aa29.33■■■□□ 2.29
MCF2L-230ENST00000491028 CFAP43Q8NDM7 1665 aa29.33■■■□□ 2.29
MCF2L-230ENST00000491028 ATP1B4Q9UN42 357 aaPredicted RBP29.32■■■□□ 2.28
MCF2L-230ENST00000491028 MAP3K1Q13233 1512 aa29.31■■■□□ 2.28
MCF2L-230ENST00000491028 ZCCHC11Q5TAX3 1644 aaKnown RBP29.3■■■□□ 2.28
MCF2L-230ENST00000491028 TIAM1Q13009 1591 aa29.28■■■□□ 2.28
MCF2L-230ENST00000491028 CDK13Q14004 1512 aaKnown RBP29.28■■■□□ 2.28
MCF2L-230ENST00000491028 ATP10BO94823 1461 aa29.28■■■□□ 2.28
MCF2L-230ENST00000491028 APLP2Q06481 763 aa29.22■■■□□ 2.27
MCF2L-230ENST00000491028 NPM1P06748 294 aaKnown RBP eCLIP29.19■■■□□ 2.26
MCF2L-230ENST00000491028 ARID3CA6NKF2 412 aa29.18■■■□□ 2.26
MCF2L-230ENST00000491028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.15■■■□□ 2.26
MCF2L-230ENST00000491028 HNRNPUL2Q1KMD3 747 aaKnown RBP29.15■■■□□ 2.26
MCF2L-230ENST00000491028 CDK11AQ9UQ88 783 aaPredicted RBP29.14■■■□□ 2.26
MCF2L-230ENST00000491028 MAPKBP1O60336 1514 aa29.14■■■□□ 2.25
MCF2L-230ENST00000491028 EHBP1L1Q8N3D4 1523 aa29.12■■■□□ 2.25
MCF2L-230ENST00000491028 LRRC9Q6ZRR7 1453 aa29.1■■■□□ 2.25
MCF2L-230ENST00000491028 MAGI3Q5TCQ9 1506 aa29.1■■■□□ 2.25
MCF2L-230ENST00000491028 MTUS2Q5JR59 1369 aa29.08■■■□□ 2.25
MCF2L-230ENST00000491028 TROQ12816 1431 aaPredicted RBP29.08■■■□□ 2.25
MCF2L-230ENST00000491028 PLEKHD1A6NEE1 506 aa29.07■■■□□ 2.24
MCF2L-230ENST00000491028 ASXL2Q76L83 1435 aa29.07■■■□□ 2.24
MCF2L-230ENST00000491028 WDR7Q9Y4E6 1490 aa29.07■■■□□ 2.24
MCF2L-230ENST00000491028 KIF14Q15058 1648 aa29.01■■■□□ 2.23
MCF2L-230ENST00000491028 SUPT6HQ7KZ85 1726 aaKnown RBP29■■■□□ 2.23
MCF2L-230ENST00000491028 KANK4Q5T7N3 995 aaPredicted RBP29■■■□□ 2.23
MCF2L-230ENST00000491028 NCOA2Q15596 1464 aa28.9■■■□□ 2.22
MCF2L-230ENST00000491028 DIP2BQ9P265 1576 aa28.88■■■□□ 2.21
MCF2L-230ENST00000491028 ABCA9Q8IUA7 1624 aa28.87■■■□□ 2.21
MCF2L-230ENST00000491028 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.87■■■□□ 2.21
MCF2L-230ENST00000491028 ABCC10Q5T3U5 1492 aa28.86■■■□□ 2.21
MCF2L-230ENST00000491028 GLI2P10070 1586 aa28.86■■■□□ 2.21
MCF2L-230ENST00000491028 TTC37Q6PGP7 1564 aa28.85■■■□□ 2.21
MCF2L-230ENST00000491028 KCNH8Q96L42 1107 aa28.85■■■□□ 2.21
MCF2L-230ENST00000491028 PPARGC1BQ86YN6 1023 aaKnown RBP28.84■■■□□ 2.21
MCF2L-230ENST00000491028 ITSN2Q9NZM3 1697 aa28.82■■■□□ 2.2
MCF2L-230ENST00000491028 MYO5CQ9NQX4 1742 aa28.8■■■□□ 2.2
MCF2L-230ENST00000491028 KIF13AQ9H1H9 1805 aa28.79■■■□□ 2.2
MCF2L-230ENST00000491028 CDC42BPAQ5VT25 1732 aa28.78■■■□□ 2.2
MCF2L-230ENST00000491028 CCNB3Q8WWL7 1395 aa28.77■■■□□ 2.2
MCF2L-230ENST00000491028 PREX2Q70Z35 1606 aa28.76■■■□□ 2.2
MCF2L-230ENST00000491028 MAP3K4Q9Y6R4 1608 aa28.76■■■□□ 2.2
MCF2L-230ENST00000491028 PHLDB1Q86UU1 1377 aa28.75■■■□□ 2.19
MCF2L-230ENST00000491028 MYOM3Q5VTT5 1437 aa28.74■■■□□ 2.19
MCF2L-230ENST00000491028 ARAP3Q8WWN8 1544 aa28.74■■■□□ 2.19
MCF2L-230ENST00000491028 TRHP20396 242 aaPredicted RBP28.73■■■□□ 2.19
MCF2L-230ENST00000491028 GPATCH8Q9UKJ3 1502 aaKnown RBP28.73■■■□□ 2.19
MCF2L-230ENST00000491028 CDC42BPBQ9Y5S2 1711 aa28.7■■■□□ 2.19
MCF2L-230ENST00000491028 FAM69CQ0P6D2 419 aa28.7■■■□□ 2.18
MCF2L-230ENST00000491028 PLCH2O75038 1416 aa28.69■■■□□ 2.18
MCF2L-230ENST00000491028 CD109Q6YHK3 1445 aa28.69■■■□□ 2.18
MCF2L-230ENST00000491028 MIA2Q96PC5 1412 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms