RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 PLEKHG5O94827 1062 aa15.83■□□□□ 0.12
PCSK9-202ENST00000490692 NOP58Q9Y2X3 529 aaKnown RBP15.82■□□□□ 0.12
PCSK9-202ENST00000490692 ATAD2BQ9ULI0 1458 aa15.82■□□□□ 0.12
PCSK9-202ENST00000490692 SIN3AQ96ST3 1273 aa15.81■□□□□ 0.12
PCSK9-202ENST00000490692 TNIKQ9UKE5 1360 aa15.81■□□□□ 0.12
PCSK9-202ENST00000490692 CLIP1P30622 1438 aa15.8■□□□□ 0.12
PCSK9-202ENST00000490692 MSH5O43196 834 aa15.77■□□□□ 0.12
PCSK9-202ENST00000490692 LAS1LQ9Y4W2 734 aaKnown RBP15.77■□□□□ 0.11
PCSK9-202ENST00000490692 SALL2Q9Y467 1007 aaPredicted RBP15.76■□□□□ 0.11
PCSK9-202ENST00000490692 PODXL2Q9NZ53 605 aa15.72■□□□□ 0.11
PCSK9-202ENST00000490692 DNAJC5BQ9UF47 199 aa15.71■□□□□ 0.11
PCSK9-202ENST00000490692 PPP4R2Q9NY27 417 aa15.7■□□□□ 0.1
PCSK9-202ENST00000490692 EIF4G1Q04637 1599 aaKnown RBP15.69■□□□□ 0.1
PCSK9-202ENST00000490692 P3H3Q8IVL6 736 aa15.69■□□□□ 0.1
PCSK9-202ENST00000490692 MRS2Q9HD23 443 aa15.69■□□□□ 0.1
PCSK9-202ENST00000490692 TONSLQ96HA7 1378 aa15.67■□□□□ 0.1
PCSK9-202ENST00000490692 NEFMP07197 916 aa15.66■□□□□ 0.1
PCSK9-202ENST00000490692 PKNOX2Q96KN3 472 aa15.66■□□□□ 0.1
PCSK9-202ENST00000490692 GOLGA3Q08378 1498 aa15.66■□□□□ 0.1
PCSK9-202ENST00000490692 ARXQ96QS3 562 aa15.65■□□□□ 0.1
PCSK9-202ENST00000490692 UBE2Q2Q8WVN8 375 aa15.65■□□□□ 0.1
PCSK9-202ENST00000490692 FANCIQ9NVI1 1328 aa15.63■□□□□ 0.09
PCSK9-202ENST00000490692 ZNF326Q5BKZ1 582 aaKnown RBP15.63■□□□□ 0.09
PCSK9-202ENST00000490692 DHX57Q6P158 1386 aaKnown RBP15.62■□□□□ 0.09
PCSK9-202ENST00000490692 EEA1Q15075 1411 aa15.62■□□□□ 0.09
PCSK9-202ENST00000490692 KANK4Q5T7N3 995 aaPredicted RBP15.61■□□□□ 0.09
PCSK9-202ENST00000490692 SYNJ1O43426 1573 aa15.6■□□□□ 0.09
PCSK9-202ENST00000490692 IL27Q8NEV9 243 aa15.59■□□□□ 0.09
PCSK9-202ENST00000490692 CCER2I3L3R5 266 aa15.56■□□□□ 0.08
PCSK9-202ENST00000490692 PAK3O75914 559 aaPredicted RBP15.55■□□□□ 0.08
PCSK9-202ENST00000490692 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
PCSK9-202ENST00000490692 PEG3Q9GZU2 1588 aa15.52■□□□□ 0.08
PCSK9-202ENST00000490692 RAPGEF2Q9Y4G8 1499 aa15.52■□□□□ 0.07
PCSK9-202ENST00000490692 VPS8Q8N3P4 1428 aa15.49■□□□□ 0.07
PCSK9-202ENST00000490692 IPO9Q96P70 1041 aaKnown RBP15.47■□□□□ 0.07
PCSK9-202ENST00000490692 ERICH6BQ5W0A0 696 aa15.45■□□□□ 0.06
PCSK9-202ENST00000490692 NCAPD3P42695 1498 aa15.45■□□□□ 0.06
PCSK9-202ENST00000490692 CCNB3Q8WWL7 1395 aa15.45■□□□□ 0.06
PCSK9-202ENST00000490692 RAB3GAP2Q9H2M9 1393 aa15.44■□□□□ 0.06
PCSK9-202ENST00000490692 GLIPR1L2Q4G1C9 344 aa15.43■□□□□ 0.06
PCSK9-202ENST00000490692 CHIC2Q9UKJ5 165 aa15.43■□□□□ 0.06
PCSK9-202ENST00000490692 TMC1Q8TDI8 760 aa15.41■□□□□ 0.06
PCSK9-202ENST00000490692 EIF4G2P78344 907 aaKnown RBP eCLIP15.4■□□□□ 0.061e-6■■■■■ 27.1
PCSK9-202ENST00000490692 TIMELESSQ9UNS1 1208 aa15.4■□□□□ 0.06
PCSK9-202ENST00000490692 KIF27Q86VH2 1401 aa15.4■□□□□ 0.06
PCSK9-202ENST00000490692 PPM1GO15355 546 aaPredicted RBP15.4■□□□□ 0.06
PCSK9-202ENST00000490692 ARID3CA6NKF2 412 aa15.37■□□□□ 0.05
PCSK9-202ENST00000490692 PPP1R15AO75807 674 aaPredicted RBP15.37■□□□□ 0.05
PCSK9-202ENST00000490692 A0A0U1RQG5 324 aaPredicted RBP15.36■□□□□ 0.05
PCSK9-202ENST00000490692 CUX2O14529 1486 aa15.36■□□□□ 0.05
PCSK9-202ENST00000490692 BRPF3Q9ULD4 1205 aa15.34■□□□□ 0.05
PCSK9-202ENST00000490692 CADPSQ9ULU8 1353 aa15.33■□□□□ 0.05
PCSK9-202ENST00000490692 CUX1P39880 1505 aa15.33■□□□□ 0.04
PCSK9-202ENST00000490692 SLC4A3P48751 1232 aa15.33■□□□□ 0.04
PCSK9-202ENST00000490692 FBLN2P98095 1184 aa15.32■□□□□ 0.04
PCSK9-202ENST00000490692 TOP2BQ02880 1626 aa15.32■□□□□ 0.04
PCSK9-202ENST00000490692 ARID4BQ4LE39 1312 aaPredicted RBP15.31■□□□□ 0.04
PCSK9-202ENST00000490692 HMGXB3Q12766 1538 aa15.31■□□□□ 0.04
PCSK9-202ENST00000490692 HSPA5P11021 654 aaKnown RBP15.31■□□□□ 0.04
PCSK9-202ENST00000490692 RRP7BPQ9NSQ0 103 aa15.31■□□□□ 0.04
PCSK9-202ENST00000490692 NAP1L5Q96NT1 182 aaPredicted RBP15.31■□□□□ 0.04
PCSK9-202ENST00000490692 CFTRP13569 1480 aa15.3■□□□□ 0.04
PCSK9-202ENST00000490692 SETD5Q9C0A6 1442 aa15.29■□□□□ 0.04
PCSK9-202ENST00000490692 KIF21BO75037 1637 aa15.28■□□□□ 0.04
PCSK9-202ENST00000490692 DDRGK1Q96HY6 314 aa15.27■□□□□ 0.04
PCSK9-202ENST00000490692 CC2D2AQ9P2K1 1620 aa15.25■□□□□ 0.03
PCSK9-202ENST00000490692 RGS3P49796 1198 aa15.24■□□□□ 0.03
PCSK9-202ENST00000490692 CARMIL1Q5VZK9 1371 aa15.24■□□□□ 0.03
PCSK9-202ENST00000490692 NESP48681 1621 aa15.23■□□□□ 0.03
PCSK9-202ENST00000490692 CCDC184Q52MB2 194 aa15.23■□□□□ 0.03
PCSK9-202ENST00000490692 VSIG10Q8N0Z9 540 aa15.23■□□□□ 0.03
PCSK9-202ENST00000490692 GSE1Q14687 1217 aa15.21■□□□□ 0.03
PCSK9-202ENST00000490692 FGD5Q6ZNL6 1462 aa15.2■□□□□ 0.02
PCSK9-202ENST00000490692 IGF1RP08069 1367 aa15.2■□□□□ 0.02
PCSK9-202ENST00000490692 FANCD2Q9BXW9 1451 aa15.2■□□□□ 0.02
PCSK9-202ENST00000490692 PRXQ9BXM0 1461 aa15.19■□□□□ 0.02
PCSK9-202ENST00000490692 PDE4AP27815 886 aa15.19■□□□□ 0.02
PCSK9-202ENST00000490692 FOXD1Q16676 465 aa15.18■□□□□ 0.02
PCSK9-202ENST00000490692 RAD54L2Q9Y4B4 1467 aa15.18■□□□□ 0.02
PCSK9-202ENST00000490692 CANXP27824 592 aaKnown RBP15.18■□□□□ 0.02
PCSK9-202ENST00000490692 ARAP1Q96P48 1450 aa15.17■□□□□ 0.02
PCSK9-202ENST00000490692 NUDCQ9Y266 331 aa15.17■□□□□ 0.02
PCSK9-202ENST00000490692 BIVM-ERCC5R4GMW8 1640 aa15.15■□□□□ 0.02
PCSK9-202ENST00000490692 TDRD9Q8NDG6 1382 aaKnown RBP15.15■□□□□ 0.02
PCSK9-202ENST00000490692 EXOC6Q8TAG9 804 aa15.15■□□□□ 0.02
PCSK9-202ENST00000490692 PRKRIP1Q9H875 184 aaPredicted RBP15.15■□□□□ 0.02
PCSK9-202ENST00000490692 TCERG1O14776 1098 aaKnown RBP15.14■□□□□ 0.01
PCSK9-202ENST00000490692 USP35Q9P2H5 1018 aa15.14■□□□□ 0.01
PCSK9-202ENST00000490692 KDM2AQ9Y2K7 1162 aa15.14■□□□□ 0.01
PCSK9-202ENST00000490692 WDR97A6NE52 1622 aa15.13■□□□□ 0.01
PCSK9-202ENST00000490692 ZBED9Q6R2W3 1325 aa15.12■□□□□ 0.01
PCSK9-202ENST00000490692 FRAT1Q92837 279 aaPredicted RBP15.12■□□□□ 0.01
PCSK9-202ENST00000490692 SLKQ9H2G2 1235 aaPredicted RBP15.12■□□□□ 0.01
PCSK9-202ENST00000490692 MTUS2Q5JR59 1369 aa15.11■□□□□ 0.01
PCSK9-202ENST00000490692 SPRYD3Q8NCJ5 442 aa15.11■□□□□ 0.01
PCSK9-202ENST00000490692 GZF1Q9H116 711 aaPredicted RBP15.11■□□□□ 0.01
PCSK9-202ENST00000490692 AKNAQ7Z591 1439 aa15.1■□□□□ 0.01
PCSK9-202ENST00000490692 PLIN1O60240 522 aa15.09■□□□□ 0.01
PCSK9-202ENST00000490692 NFKBIBQ15653 356 aa15.09■□□□□ 0.01
PCSK9-202ENST00000490692 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms