RNA–Protein interactions for RNA: ENST00000490299.5

RPS6KC1-204, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best)

Gene RPS6KC1, Length 5,154 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-204ENST00000490299 CCDC136Q96JN2 1154 aa4.95□□□□□ -1.62
RPS6KC1-204ENST00000490299 GOLGA3Q08378 1498 aa4.95□□□□□ -1.62
RPS6KC1-204ENST00000490299 HSP90AA1P07900 732 aaKnown RBP4.95□□□□□ -1.62
RPS6KC1-204ENST00000490299 PPM1GO15355 546 aaPredicted RBP4.95□□□□□ -1.62
RPS6KC1-204ENST00000490299 CHMP7Q8WUX9 453 aaPredicted RBP4.95□□□□□ -1.62
RPS6KC1-204ENST00000490299 UNC13AQ9UPW8 1703 aa4.95□□□□□ -1.62
RPS6KC1-204ENST00000490299 C14orf37Q86TY3 774 aa4.94□□□□□ -1.62
RPS6KC1-204ENST00000490299 KCNA4P22459 653 aa4.94□□□□□ -1.62
RPS6KC1-204ENST00000490299 SCRIBQ14160 1630 aa4.94□□□□□ -1.62
RPS6KC1-204ENST00000490299 ZNF326Q5BKZ1 582 aaKnown RBP4.94□□□□□ -1.62
RPS6KC1-204ENST00000490299 STAG3Q9UJ98 1225 aa4.94□□□□□ -1.62
RPS6KC1-204ENST00000490299 PABPN1Q86U42 306 aaKnown RBP eCLIP4.93□□□□□ -1.62
RPS6KC1-204ENST00000490299 TNNT2P45379 298 aaPredicted RBP4.93□□□□□ -1.62
RPS6KC1-204ENST00000490299 ERICH6BQ5W0A0 696 aa4.92□□□□□ -1.62
RPS6KC1-204ENST00000490299 KIF21AQ7Z4S6 1674 aa4.92□□□□□ -1.62
RPS6KC1-204ENST00000490299 CLIP1P30622 1438 aa4.91□□□□□ -1.62
RPS6KC1-204ENST00000490299 RSF1Q96T23 1441 aaPredicted RBP4.91□□□□□ -1.62
RPS6KC1-204ENST00000490299 GOLGA6L22H0YM25 854 aa4.91□□□□□ -1.62
RPS6KC1-204ENST00000490299 NBR1Q14596 966 aa4.91□□□□□ -1.62
RPS6KC1-204ENST00000490299 TRIM44Q96DX7 344 aaPredicted RBP4.91□□□□□ -1.62
RPS6KC1-204ENST00000490299 WDR43Q15061 677 aaKnown RBP eCLIP4.9□□□□□ -1.63
RPS6KC1-204ENST00000490299 KRI1Q8N9T8 703 aaKnown RBP4.9□□□□□ -1.63
RPS6KC1-204ENST00000490299 TMC1Q8TDI8 760 aa4.9□□□□□ -1.63
RPS6KC1-204ENST00000490299 DDX10Q13206 875 aaKnown RBP4.9□□□□□ -1.63
RPS6KC1-204ENST00000490299 CEP164Q9UPV0 1460 aa4.89□□□□□ -1.63
RPS6KC1-204ENST00000490299 CEP162Q5TB80 1403 aa4.89□□□□□ -1.63
RPS6KC1-204ENST00000490299 MIER1Q8N108 512 aa4.89□□□□□ -1.63
RPS6KC1-204ENST00000490299 TNIKQ9UKE5 1360 aa4.89□□□□□ -1.63
RPS6KC1-204ENST00000490299 FAM9BQ8IZU0 186 aa4.89□□□□□ -1.63
RPS6KC1-204ENST00000490299 MRS2Q9HD23 443 aa4.89□□□□□ -1.63
RPS6KC1-204ENST00000490299 NCLP19338 710 aaKnown RBP4.89□□□□□ -1.63
RPS6KC1-204ENST00000490299 SF3B2Q13435 895 aaKnown RBP4.89□□□□□ -1.63
RPS6KC1-204ENST00000490299 PPP4R2Q9NY27 417 aa4.89□□□□□ -1.63
RPS6KC1-204ENST00000490299 MYH16Q9H6N6 1097 aa4.88□□□□□ -1.63
RPS6KC1-204ENST00000490299 BIVM-ERCC5R4GMW8 1640 aa4.88□□□□□ -1.63
RPS6KC1-204ENST00000490299 EIF4G2P78344 907 aaKnown RBP eCLIP4.88□□□□□ -1.63
RPS6KC1-204ENST00000490299 NOP58Q9Y2X3 529 aaKnown RBP4.88□□□□□ -1.63
RPS6KC1-204ENST00000490299 NCAPD3P42695 1498 aa4.88□□□□□ -1.63
RPS6KC1-204ENST00000490299 EIF4G1Q04637 1599 aaKnown RBP4.88□□□□□ -1.63
RPS6KC1-204ENST00000490299 TIMELESSQ9UNS1 1208 aa4.88□□□□□ -1.63
RPS6KC1-204ENST00000490299 PTMSP20962 102 aa4.87□□□□□ -1.63
RPS6KC1-204ENST00000490299 SENP3Q9H4L4 574 aaPredicted RBP4.87□□□□□ -1.63
RPS6KC1-204ENST00000490299 L1TD1Q5T7N2 865 aaKnown RBP4.87□□□□□ -1.63
RPS6KC1-204ENST00000490299 KIF21BO75037 1637 aa4.87□□□□□ -1.63
RPS6KC1-204ENST00000490299 MEX3CQ5U5Q3 659 aaKnown RBP4.86□□□□□ -1.63
RPS6KC1-204ENST00000490299 ERICH3Q5RHP9 1530 aa4.86□□□□□ -1.63
RPS6KC1-204ENST00000490299 CCER2I3L3R5 266 aa4.86□□□□□ -1.63
RPS6KC1-204ENST00000490299 TULP1O00294 542 aaPredicted RBP4.86□□□□□ -1.63
RPS6KC1-204ENST00000490299 CASC1Q6TDU7 716 aa4.85□□□□□ -1.63
RPS6KC1-204ENST00000490299 CFAP44Q96MT7 982 aa4.85□□□□□ -1.63
RPS6KC1-204ENST00000490299 CHMP4BQ9H444 224 aaKnown RBP4.85□□□□□ -1.63
RPS6KC1-204ENST00000490299 MTUS2Q5JR59 1369 aa4.85□□□□□ -1.63
RPS6KC1-204ENST00000490299 CDCA8Q53HL2 280 aa4.85□□□□□ -1.63
RPS6KC1-204ENST00000490299 SUPT16HQ9Y5B9 1047 aaKnown RBP4.85□□□□□ -1.63
RPS6KC1-204ENST00000490299 MS4A1P11836 297 aa4.84□□□□□ -1.63
RPS6KC1-204ENST00000490299 BICRAQ9NZM4 1560 aa4.84□□□□□ -1.63
RPS6KC1-204ENST00000490299 ARXQ96QS3 562 aa4.84□□□□□ -1.63
RPS6KC1-204ENST00000490299 LAMC3Q9Y6N6 1575 aa4.84□□□□□ -1.63
RPS6KC1-204ENST00000490299 CC2D2AQ9P2K1 1620 aa4.84□□□□□ -1.64
RPS6KC1-204ENST00000490299 GOLGA6L6A8MZA4 724 aa4.83□□□□□ -1.64
RPS6KC1-204ENST00000490299 MAP3K9P80192 1104 aa4.83□□□□□ -1.64
RPS6KC1-204ENST00000490299 BCL11AQ9H165 835 aa4.83□□□□□ -1.64
RPS6KC1-204ENST00000490299 CUL7Q14999 1698 aa4.83□□□□□ -1.64
RPS6KC1-204ENST00000490299 NAP1L5Q96NT1 182 aaPredicted RBP4.82□□□□□ -1.64
RPS6KC1-204ENST00000490299 FHAD1B1AJZ9 1412 aa4.81□□□□□ -1.64
RPS6KC1-204ENST00000490299 NPHP1O15259 732 aa4.81□□□□□ -1.64
RPS6KC1-204ENST00000490299 PTMAP06454 111 aaKnown RBP4.81□□□□□ -1.64
RPS6KC1-204ENST00000490299 ZNF777Q9ULD5 760 aaPredicted RBP4.81□□□□□ -1.64
RPS6KC1-204ENST00000490299 WRNQ14191 1432 aaPredicted RBP eCLIP4.81□□□□□ -1.649e-6■■■■■ 50.1
RPS6KC1-204ENST00000490299 MAP3K1Q13233 1512 aa4.81□□□□□ -1.64
RPS6KC1-204ENST00000490299 P3H3Q8IVL6 736 aa4.81□□□□□ -1.64
RPS6KC1-204ENST00000490299 CFAP53Q96M91 514 aa4.81□□□□□ -1.64
RPS6KC1-204ENST00000490299 KIF27Q86VH2 1401 aa4.81□□□□□ -1.64
RPS6KC1-204ENST00000490299 THOC2Q8NI27 1593 aaKnown RBP4.8□□□□□ -1.64
RPS6KC1-204ENST00000490299 CDK11BP21127 795 aaKnown RBP4.8□□□□□ -1.64
RPS6KC1-204ENST00000490299 CHAF1AQ13111 956 aaPredicted RBP4.8□□□□□ -1.64
RPS6KC1-204ENST00000490299 DEKP35659 375 aaKnown RBP4.79□□□□□ -1.64
RPS6KC1-204ENST00000490299 TOP2BQ02880 1626 aa4.79□□□□□ -1.64
RPS6KC1-204ENST00000490299 TSPY4P0CV99 314 aa4.79□□□□□ -1.64
RPS6KC1-204ENST00000490299 TSPY10P0CW01 314 aa4.79□□□□□ -1.64
RPS6KC1-204ENST00000490299 NRDCO43847 1150 aa4.79□□□□□ -1.64
RPS6KC1-204ENST00000490299 ZRSR1Q15695 479 aaKnown RBP4.79□□□□□ -1.64
RPS6KC1-204ENST00000490299 TPRNQ4KMQ1 711 aa4.79□□□□□ -1.64
RPS6KC1-204ENST00000490299 PNNQ9H307 717 aaKnown RBP4.78□□□□□ -1.64
RPS6KC1-204ENST00000490299 MSNP26038 577 aaKnown RBP4.78□□□□□ -1.64
RPS6KC1-204ENST00000490299 DNTTIP2Q5QJE6 756 aaKnown RBP4.78□□□□□ -1.64
RPS6KC1-204ENST00000490299 EFCAB5A4FU69 1503 aa4.78□□□□□ -1.64
RPS6KC1-204ENST00000490299 IRX6P78412 446 aaPredicted RBP4.78□□□□□ -1.64
RPS6KC1-204ENST00000490299 CCNB3Q8WWL7 1395 aa4.78□□□□□ -1.64
RPS6KC1-204ENST00000490299 HSCBQ8IWL3 235 aa4.77□□□□□ -1.65
RPS6KC1-204ENST00000490299 HOMEZQ8IX15 550 aa4.77□□□□□ -1.65
RPS6KC1-204ENST00000490299 TAOK2Q9UL54 1235 aa4.77□□□□□ -1.65
RPS6KC1-204ENST00000490299 TCERG1O14776 1098 aaKnown RBP4.77□□□□□ -1.65
RPS6KC1-204ENST00000490299 USP35Q9P2H5 1018 aa4.77□□□□□ -1.65
RPS6KC1-204ENST00000490299 PPP1R1BQ9UD71 204 aaPredicted RBP4.77□□□□□ -1.65
RPS6KC1-204ENST00000490299 CCDC9Q9Y3X0 531 aaKnown RBP4.77□□□□□ -1.65
RPS6KC1-204ENST00000490299 ATAD2BQ9ULI0 1458 aa4.77□□□□□ -1.65
RPS6KC1-204ENST00000490299 VPS8Q8N3P4 1428 aa4.77□□□□□ -1.65
RPS6KC1-204ENST00000490299 SETD5Q9C0A6 1442 aa4.77□□□□□ -1.65
RPS6KC1-204ENST00000490299 FTSJ3Q8IY81 847 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms