RNA–Protein interactions for RNA: ENST00000490299.5

RPS6KC1-204, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best)

Gene RPS6KC1, Length 5,154 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-204ENST00000490299 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.06□□□□□ -1.769e-18■■■■■ 145.2
RPS6KC1-204ENST00000490299 PTBP1P26599 531 aaKnown RBP eCLIP3.58□□□□□ -1.845e-17■■■■■ 33
RPS6KC1-204ENST00000490299 RBFOX2O43251 390 aaKnown RBP eCLIP3.2□□□□□ -1.97e-17■■■□□ 17.1
RPS6KC1-204ENST00000490299 PPIGQ13427 754 aaKnown RBP eCLIP3.71□□□□□ -1.827e-11■■■□□ 16.6
RPS6KC1-204ENST00000490299 SRSF1Q07955 248 aaKnown RBP eCLIP3.13□□□□□ -1.913e-10■■■■□ 23.6
RPS6KC1-204ENST00000490299 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.94□□□□□ -1.783e-10■■■■■ 31
RPS6KC1-204ENST00000490299 QKIQ96PU8 341 aaKnown RBP eCLIP3.81□□□□□ -1.84e-10■■■■■ 32.5
RPS6KC1-204ENST00000490299 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.57□□□□□ -1.844e-10■■■■□ 24.3
RPS6KC1-204ENST00000490299 CPSF6Q16630 551 aaKnown RBP eCLIP3.63□□□□□ -1.835e-10■■■■■ 37.5
RPS6KC1-204ENST00000490299 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.54□□□□□ -1.843e-8■■■□□ 16.8
RPS6KC1-204ENST00000490299 U2AF2P26368 475 aaKnown RBP eCLIP4.15□□□□□ -1.749e-8■■■■□ 20.8
RPS6KC1-204ENST00000490299 HNRNPCP07910 306 aaKnown RBP eCLIP3.94□□□□□ -1.782e-7■■■■□ 22.3
RPS6KC1-204ENST00000490299 ZNF622Q969S3 477 aaKnown RBP eCLIP4.13□□□□□ -1.752e-7■■□□□ 12.3
RPS6KC1-204ENST00000490299 KHSRPQ92945 711 aaKnown RBP eCLIP3.45□□□□□ -1.862e-7■■□□□ 14
RPS6KC1-204ENST00000490299 RBM15Q96T37 977 aaKnown RBP eCLIP3.89□□□□□ -1.793e-7■■□□□ 13.8
RPS6KC1-204ENST00000490299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.99□□□□□ -1.773e-7■■■□□ 14.7
RPS6KC1-204ENST00000490299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.96□□□□□ -1.624e-7■□□□□ 10.7
RPS6KC1-204ENST00000490299 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.5□□□□□ -1.855e-7■■■■■ 35
RPS6KC1-204ENST00000490299 CSTF2P33240 577 aaKnown RBP eCLIP3.63□□□□□ -1.835e-7■■■■□ 19.9
RPS6KC1-204ENST00000490299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.31□□□□□ -1.725e-7■■■■■ 99.9
RPS6KC1-204ENST00000490299 U2AF1Q01081 240 aaKnown RBP eCLIP4.55□□□□□ -1.686e-7■□□□□ 8.1
RPS6KC1-204ENST00000490299 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.37□□□□□ -1.717e-7■■□□□ 12.7
RPS6KC1-204ENST00000490299 MATR3P43243 847 aaKnown RBP eCLIP4.2□□□□□ -1.741e-6■■■□□ 17.1
RPS6KC1-204ENST00000490299 HNRNPMP52272 730 aaKnown RBP eCLIP4.42□□□□□ -1.71e-6■■■■□ 22.7
RPS6KC1-204ENST00000490299 METAP2P50579 478 aaKnown RBP eCLIP4.22□□□□□ -1.731e-6■■■■■ 27.4
RPS6KC1-204ENST00000490299 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.83□□□□□ -1.81e-6■■■■■ 92.8
RPS6KC1-204ENST00000490299 FMR1Q06787 632 aaKnown RBP eCLIP3.89□□□□□ -1.791e-6■■■■■ 41.5
RPS6KC1-204ENST00000490299 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.99□□□□□ -1.932e-6■■■■□ 23.8
RPS6KC1-204ENST00000490299 SF3B1O75533 1304 aaKnown RBP eCLIP3.82□□□□□ -1.82e-6■■■■■ 71
RPS6KC1-204ENST00000490299 ILF3Q12906 894 aaKnown RBP eCLIP3.59□□□□□ -1.832e-6■■■□□ 17.5
RPS6KC1-204ENST00000490299 PUM1Q14671 1186 aaKnown RBP eCLIP3.58□□□□□ -1.842e-6■□□□□ 8.9
RPS6KC1-204ENST00000490299 TIA1P31483 386 aaKnown RBP eCLIP3.56□□□□□ -1.842e-6■■■■□ 24.7
RPS6KC1-204ENST00000490299 TARDBPQ13148 414 aaKnown RBP eCLIP3.62□□□□□ -1.832e-6■■■□□ 18.6
RPS6KC1-204ENST00000490299 XRCC6P12956 609 aaKnown RBP eCLIP4.27□□□□□ -1.733e-6■■■■□ 23
RPS6KC1-204ENST00000490299 RBM22Q9NW64 420 aaKnown RBP eCLIP3.73□□□□□ -1.813e-6■■■■□ 26.3
RPS6KC1-204ENST00000490299 SAFB2Q14151 953 aaKnown RBP eCLIP4.42□□□□□ -1.73e-6■■■□□ 17.5
RPS6KC1-204ENST00000490299 SRSF7Q16629 238 aaKnown RBP eCLIP3.2□□□□□ -1.93e-6■■■■□ 20.4
RPS6KC1-204ENST00000490299 EFTUD2Q15029 972 aaKnown RBP eCLIP3.95□□□□□ -1.784e-6■■□□□ 13.9
RPS6KC1-204ENST00000490299 SF3B4Q15427 424 aaKnown RBP eCLIP3.53□□□□□ -1.844e-6■■■□□ 15
RPS6KC1-204ENST00000490299 HLTFQ14527 1009 aaKnown RBP eCLIP4.23□□□□□ -1.734e-6■■■■□ 22.5
RPS6KC1-204ENST00000490299 TRA2AQ13595 282 aaKnown RBP eCLIP3.29□□□□□ -1.885e-6■■■■□ 19.4
RPS6KC1-204ENST00000490299 GTF2F1P35269 517 aaKnown RBP eCLIP4.28□□□□□ -1.725e-6■■■■□ 24.4
RPS6KC1-204ENST00000490299 HNRNPLP14866 589 aaKnown RBP eCLIP3.67□□□□□ -1.825e-6■□□□□ 8.4
RPS6KC1-204ENST00000490299 AGGF1Q8N302 714 aaeCLIP4□□□□□ -1.776e-6■■□□□ 12.4
RPS6KC1-204ENST00000490299 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.99□□□□□ -1.777e-6■■□□□ 12.2
RPS6KC1-204ENST00000490299 WRNQ14191 1432 aaPredicted RBP eCLIP4.81□□□□□ -1.649e-6■■■■■ 50.1
Retrieved 46 of 46 RNA–protein pairs in 10.8 ms