RNA–Protein interactions for RNA: ENST00000490299.5

RPS6KC1-204, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best)

Gene RPS6KC1, Length 5,154 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-204ENST00000490299 NISCHQ9Y2I1 1504 aa6.46□□□□□ -1.37
RPS6KC1-204ENST00000490299 CCDC180Q9P1Z9 1646 aa6.06□□□□□ -1.44
RPS6KC1-204ENST00000490299 PELP1Q8IZL8 1130 aaKnown RBP6.04□□□□□ -1.44
RPS6KC1-204ENST00000490299 DCAF8L2P0C7V8 631 aa5.96□□□□□ -1.45
RPS6KC1-204ENST00000490299 MYT1Q01538 1121 aa5.93□□□□□ -1.46
RPS6KC1-204ENST00000490299 FAM9AQ8IZU1 332 aaPredicted RBP5.9□□□□□ -1.47
RPS6KC1-204ENST00000490299 SUPT5HO00267 1087 aaKnown RBP5.81□□□□□ -1.48
RPS6KC1-204ENST00000490299 ZEB1P37275 1124 aaPredicted RBP5.8□□□□□ -1.48
RPS6KC1-204ENST00000490299 DCAF1Q9Y4B6 1507 aa5.78□□□□□ -1.48
RPS6KC1-204ENST00000490299 MYO15BQ96JP2 1530 aa5.78□□□□□ -1.48
RPS6KC1-204ENST00000490299 CENPBP07199 599 aaPredicted RBP5.75□□□□□ -1.49
RPS6KC1-204ENST00000490299 CCER1Q8TC90 406 aaPredicted RBP5.73□□□□□ -1.49
RPS6KC1-204ENST00000490299 SLC24A1O60721 1099 aa5.71□□□□□ -1.49
RPS6KC1-204ENST00000490299 APLP2Q06481 763 aa5.69□□□□□ -1.5
RPS6KC1-204ENST00000490299 ERICH6Q7L0X2 663 aa5.67□□□□□ -1.5
RPS6KC1-204ENST00000490299 SHROOM4Q9ULL8 1493 aa5.67□□□□□ -1.5
RPS6KC1-204ENST00000490299 AEBP2Q6ZN18 517 aaPredicted RBP5.63□□□□□ -1.51
RPS6KC1-204ENST00000490299 PCGF6Q9BYE7 350 aa5.6□□□□□ -1.51
RPS6KC1-204ENST00000490299 NEFLP07196 543 aa5.56□□□□□ -1.52
RPS6KC1-204ENST00000490299 ZCCHC6Q5VYS8 1495 aaKnown RBP5.51□□□□□ -1.53
RPS6KC1-204ENST00000490299 HRCP23327 699 aa5.51□□□□□ -1.53
RPS6KC1-204ENST00000490299 TRIM26Q12899 539 aaPredicted RBP5.5□□□□□ -1.53
RPS6KC1-204ENST00000490299 NACADO15069 1562 aa5.5□□□□□ -1.53
RPS6KC1-204ENST00000490299 YTHDC1Q96MU7 727 aaKnown RBP5.5□□□□□ -1.53
RPS6KC1-204ENST00000490299 TRIM41Q8WV44 630 aa5.48□□□□□ -1.53
RPS6KC1-204ENST00000490299 EHMT2Q96KQ7 1210 aa5.48□□□□□ -1.53
RPS6KC1-204ENST00000490299 MYT1LQ9UL68 1186 aa5.43□□□□□ -1.54
RPS6KC1-204ENST00000490299 TTBK1Q5TCY1 1321 aaPredicted RBP5.41□□□□□ -1.54
RPS6KC1-204ENST00000490299 DAXXQ9UER7 740 aaPredicted RBP5.38□□□□□ -1.55
RPS6KC1-204ENST00000490299 DCAF8L1A6NGE4 600 aa5.38□□□□□ -1.55
RPS6KC1-204ENST00000490299 RB1CC1Q8TDY2 1594 aa5.37□□□□□ -1.55
RPS6KC1-204ENST00000490299 UBTFP17480 764 aaKnown RBP5.37□□□□□ -1.55
RPS6KC1-204ENST00000490299 CHIC1Q5VXU3 224 aa5.36□□□□□ -1.55
RPS6KC1-204ENST00000490299 CLSPNQ9HAW4 1339 aa5.34□□□□□ -1.55
RPS6KC1-204ENST00000490299 RTL5Q5HYW3 569 aaPredicted RBP5.33□□□□□ -1.56
RPS6KC1-204ENST00000490299 FOXD1Q16676 465 aa5.32□□□□□ -1.56
RPS6KC1-204ENST00000490299 DIEXFQ68CQ4 756 aaKnown RBP5.29□□□□□ -1.56
RPS6KC1-204ENST00000490299 ZNF316A6NFI3 1004 aaPredicted RBP5.27□□□□□ -1.57
RPS6KC1-204ENST00000490299 ATP1B4Q9UN42 357 aaPredicted RBP5.27□□□□□ -1.57
RPS6KC1-204ENST00000490299 BAZ1BQ9UIG0 1483 aaKnown RBP5.26□□□□□ -1.57
RPS6KC1-204ENST00000490299 SMARCA2P51531 1590 aa5.26□□□□□ -1.57
RPS6KC1-204ENST00000490299 TRHP20396 242 aaPredicted RBP5.26□□□□□ -1.57
RPS6KC1-204ENST00000490299 ESF1Q9H501 851 aaKnown RBP5.25□□□□□ -1.57
RPS6KC1-204ENST00000490299 RANGAP1P46060 587 aaPredicted RBP5.24□□□□□ -1.57
RPS6KC1-204ENST00000490299 ABCC9O60706 1549 aa5.23□□□□□ -1.57
RPS6KC1-204ENST00000490299 CDK11AQ9UQ88 783 aaPredicted RBP5.22□□□□□ -1.57
RPS6KC1-204ENST00000490299 ACIN1Q9UKV3 1341 aaKnown RBP5.21□□□□□ -1.58
RPS6KC1-204ENST00000490299 GTF3C3Q9Y5Q9 886 aa5.21□□□□□ -1.58
RPS6KC1-204ENST00000490299 PLPPR3Q6T4P5 718 aa5.2□□□□□ -1.58
RPS6KC1-204ENST00000490299 NPM1P06748 294 aaKnown RBP eCLIP5.19□□□□□ -1.58
RPS6KC1-204ENST00000490299 PPARGC1BQ86YN6 1023 aaKnown RBP5.19□□□□□ -1.58
RPS6KC1-204ENST00000490299 ANP32CO43423 234 aa5.18□□□□□ -1.58
RPS6KC1-204ENST00000490299 HNRNPUL2Q1KMD3 747 aaKnown RBP5.17□□□□□ -1.58
RPS6KC1-204ENST00000490299 LOC105371045A0A1W2PR82 267 aa5.17□□□□□ -1.58
RPS6KC1-204ENST00000490299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.16□□□□□ -1.58
RPS6KC1-204ENST00000490299 ANP32AP39687 249 aaKnown RBP5.15□□□□□ -1.58
RPS6KC1-204ENST00000490299 GLIPR1L2Q4G1C9 344 aa5.15□□□□□ -1.59
RPS6KC1-204ENST00000490299 RTN4Q9NQC3 1192 aaKnown RBP5.15□□□□□ -1.59
RPS6KC1-204ENST00000490299 PEG3Q9GZU2 1588 aa5.14□□□□□ -1.59
RPS6KC1-204ENST00000490299 BAZ1AQ9NRL2 1556 aaPredicted RBP5.14□□□□□ -1.59
RPS6KC1-204ENST00000490299 ITGAEP38570 1179 aa5.13□□□□□ -1.59
RPS6KC1-204ENST00000490299 POLR3GLQ9BT43 218 aa5.12□□□□□ -1.59
RPS6KC1-204ENST00000490299 SCAF1Q9H7N4 1312 aaKnown RBP5.12□□□□□ -1.59
RPS6KC1-204ENST00000490299 BCANQ96GW7 911 aa5.11□□□□□ -1.59
RPS6KC1-204ENST00000490299 PHF23Q9BUL5 403 aaPredicted RBP5.11□□□□□ -1.59
RPS6KC1-204ENST00000490299 ZBTB47Q9UFB7 747 aaPredicted RBP5.09□□□□□ -1.6
RPS6KC1-204ENST00000490299 PRDM2Q13029 1718 aa5.08□□□□□ -1.6
RPS6KC1-204ENST00000490299 WDR97A6NE52 1622 aa5.08□□□□□ -1.6
RPS6KC1-204ENST00000490299 EEA1Q15075 1411 aa5.08□□□□□ -1.6
RPS6KC1-204ENST00000490299 ANP32BQ92688 251 aaKnown RBP5.08□□□□□ -1.6
RPS6KC1-204ENST00000490299 FAM50AQ14320 339 aaKnown RBP5.08□□□□□ -1.6
RPS6KC1-204ENST00000490299 FBLN2P98095 1184 aa5.07□□□□□ -1.6
RPS6KC1-204ENST00000490299 TRIM52Q96A61 297 aa5.06□□□□□ -1.6
RPS6KC1-204ENST00000490299 HMGXB3Q12766 1538 aa5.05□□□□□ -1.6
RPS6KC1-204ENST00000490299 TOP2AP11388 1531 aaKnown RBP5.04□□□□□ -1.6
RPS6KC1-204ENST00000490299 CANXP27824 592 aaKnown RBP5.04□□□□□ -1.6
RPS6KC1-204ENST00000490299 NEUROD1Q13562 356 aa5.04□□□□□ -1.6
RPS6KC1-204ENST00000490299 UPF2Q9HAU5 1272 aaKnown RBP5.03□□□□□ -1.6
RPS6KC1-204ENST00000490299 NCBP3Q53F19 620 aaKnown RBP5.02□□□□□ -1.61
RPS6KC1-204ENST00000490299 DDRGK1Q96HY6 314 aa5.02□□□□□ -1.61
RPS6KC1-204ENST00000490299 ANP32EQ9BTT0 268 aa5.02□□□□□ -1.61
RPS6KC1-204ENST00000490299 AMER1Q5JTC6 1135 aaPredicted RBP5.02□□□□□ -1.61
RPS6KC1-204ENST00000490299 FKBP8Q14318 412 aa5.01□□□□□ -1.61
RPS6KC1-204ENST00000490299 TONSLQ96HA7 1378 aa5.01□□□□□ -1.61
RPS6KC1-204ENST00000490299 NEFMP07197 916 aa5.01□□□□□ -1.61
RPS6KC1-204ENST00000490299 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.01□□□□□ -1.61
RPS6KC1-204ENST00000490299 CSRNP3Q8WYN3 585 aa5.01□□□□□ -1.61
RPS6KC1-204ENST00000490299 SLC4A1APQ9BWU0 796 aaKnown RBP5.01□□□□□ -1.61
RPS6KC1-204ENST00000490299 PRKCSHP14314 528 aaPredicted RBP5□□□□□ -1.61
RPS6KC1-204ENST00000490299 SMARCA4P51532 1647 aa5□□□□□ -1.61
RPS6KC1-204ENST00000490299 EIF5BO60841 1220 aaKnown RBP4.99□□□□□ -1.61
RPS6KC1-204ENST00000490299 A0A0G2JS52 829 aa4.99□□□□□ -1.61
RPS6KC1-204ENST00000490299 HAP1P54257 671 aaPredicted RBP4.98□□□□□ -1.61
RPS6KC1-204ENST00000490299 ABCC8Q09428 1581 aa4.97□□□□□ -1.61
RPS6KC1-204ENST00000490299 CNGB1Q14028 1251 aaPredicted RBP4.97□□□□□ -1.61
RPS6KC1-204ENST00000490299 NPM2Q86SE8 214 aaKnown RBP4.96□□□□□ -1.62
RPS6KC1-204ENST00000490299 ARID4BQ4LE39 1312 aaPredicted RBP4.96□□□□□ -1.62
RPS6KC1-204ENST00000490299 BECN1Q14457 450 aa4.96□□□□□ -1.62
RPS6KC1-204ENST00000490299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.96□□□□□ -1.624e-7■□□□□ 10.7
RPS6KC1-204ENST00000490299 HNRNPUQ00839 825 aaKnown RBP eCLIP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms