RNA–Protein interactions for RNA: ENST00000490299.5

RPS6KC1-204, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best)

Gene RPS6KC1, Length 5,154 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-204ENST00000490299 KRTAP2-1Q9BYU5 128 aa1.34□□□□□ -2.2
RPS6KC1-204ENST00000490299 RYR2Q92736 4967 aa1.33□□□□□ -2.2
RPS6KC1-204ENST00000490299 LCE5AQ5TCM9 118 aa1.32□□□□□ -2.2
RPS6KC1-204ENST00000490299 KRTAP6-3Q3LI67 103 aa1.32□□□□□ -2.2
RPS6KC1-204ENST00000490299 SYNE2Q8WXH0 6885 aaKnown RBP1.31□□□□□ -2.2
RPS6KC1-204ENST00000490299 RYR3Q15413 4870 aa1.31□□□□□ -2.2
RPS6KC1-204ENST00000490299 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.31□□□□□ -2.2
RPS6KC1-204ENST00000490299 LRP2P98164 4655 aa1.3□□□□□ -2.2
RPS6KC1-204ENST00000490299 MT1XP80297 61 aa1.3□□□□□ -2.2
RPS6KC1-204ENST00000490299 EPPK1P58107 5090 aaKnown RBP1.29□□□□□ -2.2
RPS6KC1-204ENST00000490299 RYR1P21817 5038 aa1.29□□□□□ -2.2
RPS6KC1-204ENST00000490299 HERC2O95714 4834 aa1.27□□□□□ -2.21
RPS6KC1-204ENST00000490299 PCLOQ9Y6V0 5065 aa1.27□□□□□ -2.21
RPS6KC1-204ENST00000490299 KRTAP19-2Q3LHN2 52 aa1.27□□□□□ -2.21
RPS6KC1-204ENST00000490299 LPAP08519 4548 aa1.27□□□□□ -2.21
RPS6KC1-204ENST00000490299 FSIP2Q5CZC0 6907 aa1.27□□□□□ -2.21
RPS6KC1-204ENST00000490299 MT1BP07438 61 aa1.26□□□□□ -2.21
RPS6KC1-204ENST00000490299 MT1GP13640 62 aa1.26□□□□□ -2.21
RPS6KC1-204ENST00000490299 NEBP20929 6669 aa1.25□□□□□ -2.21
RPS6KC1-204ENST00000490299 COL7A1Q02388 2944 aa1.25□□□□□ -2.21
RPS6KC1-204ENST00000490299 KRTAP19-6Q3LI70 58 aa1.25□□□□□ -2.21
RPS6KC1-204ENST00000490299 LCE3EQ5T5B0 92 aa1.24□□□□□ -2.21
RPS6KC1-204ENST00000490299 LCE3DQ9BYE3 92 aa1.24□□□□□ -2.21
RPS6KC1-204ENST00000490299 LCE1FQ5T754 118 aa1.23□□□□□ -2.21
RPS6KC1-204ENST00000490299 KMT2CQ8NEZ4 4911 aaKnown RBP1.23□□□□□ -2.21
RPS6KC1-204ENST00000490299 MT1LQ93083 61 aa1.22□□□□□ -2.21
RPS6KC1-204ENST00000490299 MT1EP04732 61 aa1.22□□□□□ -2.21
RPS6KC1-204ENST00000490299 LCE1CQ5T751 118 aa1.21□□□□□ -2.21
RPS6KC1-204ENST00000490299 LCE1EQ5T753 118 aa1.21□□□□□ -2.21
RPS6KC1-204ENST00000490299 LCE1AQ5T7P2 110 aa1.21□□□□□ -2.21
RPS6KC1-204ENST00000490299 LCE1BQ5T7P3 118 aa1.21□□□□□ -2.22
RPS6KC1-204ENST00000490299 KRTAP5-2Q701N4 177 aa1.21□□□□□ -2.22
RPS6KC1-204ENST00000490299 KRTAP5-9P26371 169 aa1.2□□□□□ -2.22
RPS6KC1-204ENST00000490299 HYDINQ4G0P3 5121 aa1.19□□□□□ -2.22
RPS6KC1-204ENST00000490299 KRTAP19-3Q7Z4W3 81 aa1.19□□□□□ -2.22
RPS6KC1-204ENST00000490299 KIAA1109Q2LD37 5005 aa1.16□□□□□ -2.22
RPS6KC1-204ENST00000490299 PRM1P04553 51 aa1.14□□□□□ -2.23
RPS6KC1-204ENST00000490299 MT1MQ8N339 61 aa1.14□□□□□ -2.23
RPS6KC1-204ENST00000490299 MT1AP04731 61 aa1.12□□□□□ -2.23
RPS6KC1-204ENST00000490299 ABCA13Q86UQ4 5058 aa1.12□□□□□ -2.23
RPS6KC1-204ENST00000490299 SYNE1Q8NF91 8797 aaKnown RBP1.1□□□□□ -2.23
RPS6KC1-204ENST00000490299 HMCN1Q96RW7 5635 aa1.1□□□□□ -2.23
RPS6KC1-204ENST00000490299 FAT4Q6V0I7 4981 aa1.1□□□□□ -2.23
RPS6KC1-204ENST00000490299 MUC5BQ9HC84 5762 aaPredicted RBP1.06□□□□□ -2.24
RPS6KC1-204ENST00000490299 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
RPS6KC1-204ENST00000490299 KRTAP19-7Q3SYF9 63 aa1.06□□□□□ -2.24
RPS6KC1-204ENST00000490299 KRTAP5-4Q6L8H1 288 aa1.06□□□□□ -2.24
RPS6KC1-204ENST00000490299 DSTQ03001 7570 aaKnown RBP1.05□□□□□ -2.24
RPS6KC1-204ENST00000490299 UBR4Q5T4S7 5183 aa1.05□□□□□ -2.24
RPS6KC1-204ENST00000490299 HMCN2Q8NDA2 5059 aa1.03□□□□□ -2.24
RPS6KC1-204ENST00000490299 KRTAP5-11Q6L8G4 156 aa1.01□□□□□ -2.25
RPS6KC1-204ENST00000490299 AHNAKQ09666 5890 aaKnown RBP1.01□□□□□ -2.25
RPS6KC1-204ENST00000490299 FCGBPQ9Y6R7 5405 aaPredicted RBP1.01□□□□□ -2.25
RPS6KC1-204ENST00000490299 KRTAP6-2Q3LI66 62 aa1□□□□□ -2.25
RPS6KC1-204ENST00000490299 KRTAP4-3Q9BYR4 195 aa1□□□□□ -2.25
RPS6KC1-204ENST00000490299 OBSCNQ5VST9 7968 aa0.99□□□□□ -2.25
RPS6KC1-204ENST00000490299 MUC2Q02817 5179 aa0.97□□□□□ -2.25
RPS6KC1-204ENST00000490299 KRTAP9-6A8MVA2 160 aa0.97□□□□□ -2.25
RPS6KC1-204ENST00000490299 KRTAP6-1Q3LI64 71 aa0.97□□□□□ -2.25
RPS6KC1-204ENST00000490299 MDN1Q9NU22 5596 aa0.94□□□□□ -2.26
RPS6KC1-204ENST00000490299 KRTAP5-8O75690 187 aa0.93□□□□□ -2.26
RPS6KC1-204ENST00000490299 KMT2DO14686 5537 aa0.91□□□□□ -2.26
RPS6KC1-204ENST00000490299 RNF213Q63HN8 5207 aa0.91□□□□□ -2.26
RPS6KC1-204ENST00000490299 KRTAP5-5Q701N2 237 aaPredicted RBP0.89□□□□□ -2.27
RPS6KC1-204ENST00000490299 KRTAP4-4Q9BYR3 166 aa0.89□□□□□ -2.27
RPS6KC1-204ENST00000490299 MUC12Q9UKN1 5478 aa0.88□□□□□ -2.27
RPS6KC1-204ENST00000490299 PHGR1C9JFL3 82 aa0.87□□□□□ -2.27
RPS6KC1-204ENST00000490299 MUC19Q7Z5P9 8384 aa0.86□□□□□ -2.27
RPS6KC1-204ENST00000490299 KRTAP20-2Q3LI61 65 aa0.86□□□□□ -2.27
RPS6KC1-204ENST00000490299 SSPOA2VEC9 5147 aa0.84□□□□□ -2.28
RPS6KC1-204ENST00000490299 KRTAP5-1Q6L8H4 278 aa0.84□□□□□ -2.28
RPS6KC1-204ENST00000490299 USH2AO75445 5202 aa0.82□□□□□ -2.28
RPS6KC1-204ENST00000490299 MUC5ACP98088 5654 aa0.79□□□□□ -2.28
RPS6KC1-204ENST00000490299 KRTAP5-7Q6L8G8 165 aa0.79□□□□□ -2.28
RPS6KC1-204ENST00000490299 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
RPS6KC1-204ENST00000490299 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
RPS6KC1-204ENST00000490299 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
RPS6KC1-204ENST00000490299 KRTAP21-2Q3LI59 83 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms