RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 TRHP20396 242 aaPredicted RBP29.77■■■□□ 2.36
SEC13-218ENST00000490283 RUSC2Q8N2Y8 1516 aa29.76■■■□□ 2.36
SEC13-218ENST00000490283 PRG4Q92954 1404 aaPredicted RBP29.76■■■□□ 2.35
SEC13-218ENST00000490283 KIAA0586Q9BVV6 1533 aa29.71■■■□□ 2.35
SEC13-218ENST00000490283 RAPGEF2Q9Y4G8 1499 aa29.56■■■□□ 2.32
SEC13-218ENST00000490283 IQGAP2Q13576 1575 aa29.47■■■□□ 2.31
SEC13-218ENST00000490283 CARMIL2Q6F5E8 1435 aa29.47■■■□□ 2.31
SEC13-218ENST00000490283 NPM1P06748 294 aaKnown RBP eCLIP29.42■■■□□ 2.3
SEC13-218ENST00000490283 PTPRGP23470 1445 aa29.37■■■□□ 2.29
SEC13-218ENST00000490283 TNIKQ9UKE5 1360 aa29.36■■■□□ 2.29
SEC13-218ENST00000490283 TTBK1Q5TCY1 1321 aaPredicted RBP29.34■■■□□ 2.29
SEC13-218ENST00000490283 PRXQ9BXM0 1461 aa29.32■■■□□ 2.28
SEC13-218ENST00000490283 ADCY10Q96PN6 1610 aa29.29■■■□□ 2.28
SEC13-218ENST00000490283 UGGT2Q9NYU1 1516 aa29.29■■■□□ 2.28
SEC13-218ENST00000490283 DISP1Q96F81 1524 aa29.26■■■□□ 2.27
SEC13-218ENST00000490283 CSRNP3Q8WYN3 585 aa29.26■■■□□ 2.27
SEC13-218ENST00000490283 EEA1Q15075 1411 aa29.26■■■□□ 2.27
SEC13-218ENST00000490283 CTTNBP2Q8WZ74 1663 aa29.23■■■□□ 2.27
SEC13-218ENST00000490283 MAPKBP1O60336 1514 aa29.22■■■□□ 2.27
SEC13-218ENST00000490283 KIAA0556O60303 1618 aa29.19■■■□□ 2.26
SEC13-218ENST00000490283 GOLGA3Q08378 1498 aa29.17■■■□□ 2.26
SEC13-218ENST00000490283 UACAQ9BZF9 1416 aa29.15■■■□□ 2.26
SEC13-218ENST00000490283 FAM69CQ0P6D2 419 aa29.14■■■□□ 2.26
SEC13-218ENST00000490283 ABCC10Q5T3U5 1492 aa29.14■■■□□ 2.26
SEC13-218ENST00000490283 ABCC2Q92887 1545 aa29.14■■■□□ 2.25
SEC13-218ENST00000490283 UHRF1BP1LA0JNW5 1464 aa29.12■■■□□ 2.25
SEC13-218ENST00000490283 FAM9AQ8IZU1 332 aaPredicted RBP29.1■■■□□ 2.25
SEC13-218ENST00000490283 KIF13AQ9H1H9 1805 aa29.08■■■□□ 2.25
SEC13-218ENST00000490283 CHIC1Q5VXU3 224 aa29.07■■■□□ 2.24
SEC13-218ENST00000490283 DIP2BQ9P265 1576 aa29.05■■■□□ 2.24
SEC13-218ENST00000490283 PLB1Q6P1J6 1458 aa29■■■□□ 2.23
SEC13-218ENST00000490283 ASXL2Q76L83 1435 aa28.99■■■□□ 2.23
SEC13-218ENST00000490283 KDM5BQ9UGL1 1544 aa28.97■■■□□ 2.23
SEC13-218ENST00000490283 P3H3Q8IVL6 736 aa28.91■■■□□ 2.22
SEC13-218ENST00000490283 KIF21BO75037 1637 aa28.91■■■□□ 2.22
SEC13-218ENST00000490283 ZCCHC11Q5TAX3 1644 aaKnown RBP28.89■■■□□ 2.22
SEC13-218ENST00000490283 ABCA8O94911 1581 aa28.87■■■□□ 2.21
SEC13-218ENST00000490283 RANGAP1P46060 587 aaPredicted RBP28.85■■■□□ 2.21
SEC13-218ENST00000490283 SAMD9Q5K651 1589 aa28.84■■■□□ 2.21
SEC13-218ENST00000490283 GLI2P10070 1586 aa28.83■■■□□ 2.21
SEC13-218ENST00000490283 EPRSP07814 1512 aaKnown RBP28.8■■■□□ 2.2
SEC13-218ENST00000490283 WDR7Q9Y4E6 1490 aa28.79■■■□□ 2.2
SEC13-218ENST00000490283 TSPOAP1O95153 1857 aa28.78■■■□□ 2.2
SEC13-218ENST00000490283 UBTFP17480 764 aaKnown RBP28.78■■■□□ 2.2
SEC13-218ENST00000490283 EHMT2Q96KQ7 1210 aa28.76■■■□□ 2.19
SEC13-218ENST00000490283 KDM6BO15054 1643 aa28.72■■■□□ 2.19
SEC13-218ENST00000490283 EFCAB5A4FU69 1503 aa28.71■■■□□ 2.19
SEC13-218ENST00000490283 FHOD3Q2V2M9 1422 aa28.7■■■□□ 2.19
SEC13-218ENST00000490283 ARID3CA6NKF2 412 aa28.7■■■□□ 2.18
SEC13-218ENST00000490283 KCNH8Q96L42 1107 aa28.68■■■□□ 2.18
SEC13-218ENST00000490283 RAPGEF6Q8TEU7 1601 aa28.67■■■□□ 2.18
SEC13-218ENST00000490283 TEX14Q8IWB6 1497 aa28.66■■■□□ 2.18
SEC13-218ENST00000490283 MAP3K4Q9Y6R4 1608 aa28.65■■■□□ 2.18
SEC13-218ENST00000490283 ATP10BO94823 1461 aa28.65■■■□□ 2.18
SEC13-218ENST00000490283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.64■■■□□ 2.18
SEC13-218ENST00000490283 HNRNPUL2Q1KMD3 747 aaKnown RBP28.64■■■□□ 2.18
SEC13-218ENST00000490283 PPRC1Q5VV67 1664 aaKnown RBP28.61■■■□□ 2.17
SEC13-218ENST00000490283 AEBP2Q6ZN18 517 aaPredicted RBP28.59■■■□□ 2.17
SEC13-218ENST00000490283 CD109Q6YHK3 1445 aa28.58■■■□□ 2.17
SEC13-218ENST00000490283 NUP153P49790 1475 aaKnown RBP28.55■■■□□ 2.16
SEC13-218ENST00000490283 CFAP43Q8NDM7 1665 aa28.54■■■□□ 2.16
SEC13-218ENST00000490283 MAGI3Q5TCQ9 1506 aa28.52■■■□□ 2.16
SEC13-218ENST00000490283 FMN1Q68DA7 1419 aa28.49■■■□□ 2.15
SEC13-218ENST00000490283 ARHGAP35Q9NRY4 1499 aa28.46■■■□□ 2.15
SEC13-218ENST00000490283 PLEKHD1A6NEE1 506 aa28.46■■■□□ 2.15
SEC13-218ENST00000490283 ATP1B4Q9UN42 357 aaPredicted RBP28.42■■■□□ 2.14
SEC13-218ENST00000490283 COL17A1Q9UMD9 1497 aaPredicted RBP28.41■■■□□ 2.14
SEC13-218ENST00000490283 ABCA9Q8IUA7 1624 aa28.4■■■□□ 2.14
SEC13-218ENST00000490283 HECW1Q76N89 1606 aa28.36■■■□□ 2.13
SEC13-218ENST00000490283 PHLDB1Q86UU1 1377 aa28.34■■■□□ 2.13
SEC13-218ENST00000490283 CDK13Q14004 1512 aaKnown RBP28.33■■■□□ 2.13
SEC13-218ENST00000490283 CDK11AQ9UQ88 783 aaPredicted RBP28.31■■■□□ 2.12
SEC13-218ENST00000490283 ARAP3Q8WWN8 1544 aa28.27■■■□□ 2.12
SEC13-218ENST00000490283 NEO1Q92859 1461 aa28.27■■■□□ 2.12
SEC13-218ENST00000490283 CLIP1P30622 1438 aa28.24■■■□□ 2.11
SEC13-218ENST00000490283 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.21■■■□□ 2.11
SEC13-218ENST00000490283 KDM4FA0A1W2PPD8 638 aa28.19■■■□□ 2.1
SEC13-218ENST00000490283 CASKIN1Q8WXD9 1431 aa28.18■■■□□ 2.1
SEC13-218ENST00000490283 TTC37Q6PGP7 1564 aa28.16■■■□□ 2.1
SEC13-218ENST00000490283 FANCAO15360 1455 aa28.15■■■□□ 2.1
SEC13-218ENST00000490283 CFAP74Q9C0B2 1584 aa28.15■■■□□ 2.1
SEC13-218ENST00000490283 CCDC18Q5T9S5 1454 aa28.15■■■□□ 2.1
SEC13-218ENST00000490283 PCF11O94913 1555 aaKnown RBP28.14■■■□□ 2.1
SEC13-218ENST00000490283 TROQ12816 1431 aaPredicted RBP28.13■■■□□ 2.09
SEC13-218ENST00000490283 ADGRL1O94910 1474 aa28.13■■■□□ 2.09
SEC13-218ENST00000490283 RAPGEF3O95398 923 aa28.12■■■□□ 2.09
SEC13-218ENST00000490283 AKNAQ7Z591 1439 aa28.11■■■□□ 2.09
SEC13-218ENST00000490283 FYCO1Q9BQS8 1478 aa28.1■■■□□ 2.09
SEC13-218ENST00000490283 KIF14Q15058 1648 aa28.1■■■□□ 2.09
SEC13-218ENST00000490283 DENND4BO75064 1496 aaPredicted RBP28.08■■■□□ 2.09
SEC13-218ENST00000490283 PLCH2O75038 1416 aa28.08■■■□□ 2.09
SEC13-218ENST00000490283 EFCAB2Q5VUJ9 269 aa28.03■■■□□ 2.08
SEC13-218ENST00000490283 LRRIQ1Q96JM4 1722 aa28.02■■■□□ 2.08
SEC13-218ENST00000490283 CEP162Q5TB80 1403 aa28.01■■■□□ 2.07
SEC13-218ENST00000490283 FRMPD1Q5SYB0 1578 aa28■■■□□ 2.07
SEC13-218ENST00000490283 MYO5CQ9NQX4 1742 aa28■■■□□ 2.07
SEC13-218ENST00000490283 SCAPERQ9BY12 1400 aa27.96■■■□□ 2.07
SEC13-218ENST00000490283 ARHGAP5Q13017 1502 aa27.95■■■□□ 2.06
SEC13-218ENST00000490283 RICTORQ6R327 1708 aa27.93■■■□□ 2.06
SEC13-218ENST00000490283 ARID4BQ4LE39 1312 aaPredicted RBP27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms