RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 CUL7Q14999 1698 aa20.71■□□□□ 0.91
FDPS-215ENST00000490140 KIF27Q86VH2 1401 aa20.69■□□□□ 0.9
FDPS-215ENST00000490140 NPM1P06748 294 aaKnown RBP eCLIP20.66■□□□□ 0.9
FDPS-215ENST00000490140 KIF13AQ9H1H9 1805 aa20.66■□□□□ 0.9
FDPS-215ENST00000490140 KIAA0586Q9BVV6 1533 aa20.64■□□□□ 0.9
FDPS-215ENST00000490140 MAPKBP1O60336 1514 aa20.63■□□□□ 0.89
FDPS-215ENST00000490140 IGF1RP08069 1367 aa20.59■□□□□ 0.89
FDPS-215ENST00000490140 ABCC10Q5T3U5 1492 aa20.58■□□□□ 0.89
FDPS-215ENST00000490140 ADCY10Q96PN6 1610 aa20.56■□□□□ 0.88
FDPS-215ENST00000490140 FAM69CQ0P6D2 419 aa20.53■□□□□ 0.88
FDPS-215ENST00000490140 DIP2BQ9P265 1576 aa20.53■□□□□ 0.88
FDPS-215ENST00000490140 CARMIL2Q6F5E8 1435 aa20.51■□□□□ 0.87
FDPS-215ENST00000490140 CARMIL1Q5VZK9 1371 aa20.49■□□□□ 0.87
FDPS-215ENST00000490140 PTPRGP23470 1445 aa20.46■□□□□ 0.87
FDPS-215ENST00000490140 IQGAP2Q13576 1575 aa20.46■□□□□ 0.87
FDPS-215ENST00000490140 TNIKQ9UKE5 1360 aa20.43■□□□□ 0.86
FDPS-215ENST00000490140 KDM6BO15054 1643 aa20.42■□□□□ 0.86
FDPS-215ENST00000490140 ABCC2Q92887 1545 aa20.4■□□□□ 0.86
FDPS-215ENST00000490140 PLB1Q6P1J6 1458 aa20.37■□□□□ 0.85
FDPS-215ENST00000490140 TSPOAP1O95153 1857 aa20.36■□□□□ 0.85
FDPS-215ENST00000490140 UHRF1BP1LA0JNW5 1464 aa20.35■□□□□ 0.85
FDPS-215ENST00000490140 TTBK1Q5TCY1 1321 aaPredicted RBP20.33■□□□□ 0.85
FDPS-215ENST00000490140 RAPGEF2Q9Y4G8 1499 aa20.33■□□□□ 0.85
FDPS-215ENST00000490140 ASXL2Q76L83 1435 aa20.31■□□□□ 0.84
FDPS-215ENST00000490140 UACAQ9BZF9 1416 aa20.3■□□□□ 0.84
FDPS-215ENST00000490140 UGGT2Q9NYU1 1516 aa20.3■□□□□ 0.84
FDPS-215ENST00000490140 GLI2P10070 1586 aa20.29■□□□□ 0.84
FDPS-215ENST00000490140 DISP1Q96F81 1524 aa20.28■□□□□ 0.84
FDPS-215ENST00000490140 KIAA0556O60303 1618 aa20.25■□□□□ 0.83
FDPS-215ENST00000490140 KDM5BQ9UGL1 1544 aa20.23■□□□□ 0.83
FDPS-215ENST00000490140 TEX14Q8IWB6 1497 aa20.21■□□□□ 0.83
FDPS-215ENST00000490140 CTTNBP2Q8WZ74 1663 aa20.21■□□□□ 0.83
FDPS-215ENST00000490140 GOLGA3Q08378 1498 aa20.2■□□□□ 0.82
FDPS-215ENST00000490140 ZCCHC11Q5TAX3 1644 aaKnown RBP20.19■□□□□ 0.82
FDPS-215ENST00000490140 EPRSP07814 1512 aaKnown RBP20.18■□□□□ 0.82
FDPS-215ENST00000490140 PPRC1Q5VV67 1664 aaKnown RBP20.18■□□□□ 0.82
FDPS-215ENST00000490140 MAP3K4Q9Y6R4 1608 aa20.17■□□□□ 0.82
FDPS-215ENST00000490140 WDR7Q9Y4E6 1490 aa20.13■□□□□ 0.81
FDPS-215ENST00000490140 FAM9AQ8IZU1 332 aaPredicted RBP20.12■□□□□ 0.81
FDPS-215ENST00000490140 KDM4FA0A1W2PPD8 638 aa20.11■□□□□ 0.81
FDPS-215ENST00000490140 PRXQ9BXM0 1461 aa20.05■□□□□ 0.8
FDPS-215ENST00000490140 CFAP43Q8NDM7 1665 aa20.05■□□□□ 0.8
FDPS-215ENST00000490140 ABCA8O94911 1581 aa20.04■□□□□ 0.8
FDPS-215ENST00000490140 ADGRL1O94910 1474 aa20.04■□□□□ 0.8
FDPS-215ENST00000490140 MAGI3Q5TCQ9 1506 aa20.01■□□□□ 0.79
FDPS-215ENST00000490140 CD109Q6YHK3 1445 aa19.99■□□□□ 0.79
FDPS-215ENST00000490140 COL17A1Q9UMD9 1497 aaPredicted RBP19.99■□□□□ 0.79
FDPS-215ENST00000490140 KCNH8Q96L42 1107 aa19.92■□□□□ 0.78
FDPS-215ENST00000490140 SAMD9Q5K651 1589 aa19.88■□□□□ 0.77
FDPS-215ENST00000490140 EEA1Q15075 1411 aa19.88■□□□□ 0.77
FDPS-215ENST00000490140 PHLDB1Q86UU1 1377 aa19.87■□□□□ 0.77
FDPS-215ENST00000490140 CSRNP3Q8WYN3 585 aa19.85■□□□□ 0.77
FDPS-215ENST00000490140 ARAP3Q8WWN8 1544 aa19.85■□□□□ 0.77
FDPS-215ENST00000490140 ABCA9Q8IUA7 1624 aa19.84■□□□□ 0.77
FDPS-215ENST00000490140 RAPGEF6Q8TEU7 1601 aa19.84■□□□□ 0.77
FDPS-215ENST00000490140 ATP10BO94823 1461 aa19.84■□□□□ 0.77
FDPS-215ENST00000490140 HECW2Q9P2P5 1572 aa19.8■□□□□ 0.76
FDPS-215ENST00000490140 P3H3Q8IVL6 736 aa19.8■□□□□ 0.76
FDPS-215ENST00000490140 KIF21BO75037 1637 aa19.78■□□□□ 0.76
FDPS-215ENST00000490140 ARID3CA6NKF2 412 aa19.78■□□□□ 0.76
FDPS-215ENST00000490140 NEO1Q92859 1461 aa19.78■□□□□ 0.76
FDPS-215ENST00000490140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.76
FDPS-215ENST00000490140 HNRNPUL2Q1KMD3 747 aaKnown RBP19.77■□□□□ 0.76
FDPS-215ENST00000490140 EFCAB5A4FU69 1503 aa19.73■□□□□ 0.75
FDPS-215ENST00000490140 NUP153P49790 1475 aaKnown RBP19.73■□□□□ 0.75
FDPS-215ENST00000490140 CFAP74Q9C0B2 1584 aa19.7■□□□□ 0.74
FDPS-215ENST00000490140 FHOD3Q2V2M9 1422 aa19.68■□□□□ 0.74
FDPS-215ENST00000490140 PLEKHD1A6NEE1 506 aa19.66■□□□□ 0.74
FDPS-215ENST00000490140 ILDR1Q86SU0 546 aaPredicted RBP19.65■□□□□ 0.74
FDPS-215ENST00000490140 RANGAP1P46060 587 aaPredicted RBP19.64■□□□□ 0.73
FDPS-215ENST00000490140 ADAMTSL3P82987 1691 aa19.63■□□□□ 0.73
FDPS-215ENST00000490140 FRMPD1Q5SYB0 1578 aa19.62■□□□□ 0.73
FDPS-215ENST00000490140 RAPGEF3O95398 923 aa19.62■□□□□ 0.73
FDPS-215ENST00000490140 ARHGEF40Q8TER5 1519 aa19.61■□□□□ 0.73
FDPS-215ENST00000490140 DENND4BO75064 1496 aaPredicted RBP19.61■□□□□ 0.73
FDPS-215ENST00000490140 FANCAO15360 1455 aa19.6■□□□□ 0.73
FDPS-215ENST00000490140 PTPRMP28827 1452 aa19.6■□□□□ 0.73
FDPS-215ENST00000490140 ARID4BQ4LE39 1312 aaPredicted RBP19.6■□□□□ 0.73
FDPS-215ENST00000490140 BCORL1Q5H9F3 1711 aa19.59■□□□□ 0.73
FDPS-215ENST00000490140 RICTORQ6R327 1708 aa19.57■□□□□ 0.72
FDPS-215ENST00000490140 AKNAQ7Z591 1439 aa19.57■□□□□ 0.72
FDPS-215ENST00000490140 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.56■□□□□ 0.72
FDPS-215ENST00000490140 FMN1Q68DA7 1419 aa19.55■□□□□ 0.72
FDPS-215ENST00000490140 POGZQ7Z3K3 1410 aa19.55■□□□□ 0.72
FDPS-215ENST00000490140 ZMYM4Q5VZL5 1548 aa19.55■□□□□ 0.72
FDPS-215ENST00000490140 HECW1Q76N89 1606 aa19.54■□□□□ 0.72
FDPS-215ENST00000490140 MADDQ8WXG6 1647 aa19.54■□□□□ 0.72
FDPS-215ENST00000490140 TTC37Q6PGP7 1564 aa19.54■□□□□ 0.72
FDPS-215ENST00000490140 MAGI2Q86UL8 1455 aa19.53■□□□□ 0.72
FDPS-215ENST00000490140 ZFYVE16Q7Z3T8 1539 aa19.51■□□□□ 0.71
FDPS-215ENST00000490140 PCF11O94913 1555 aaKnown RBP19.5■□□□□ 0.71
FDPS-215ENST00000490140 CDK11AQ9UQ88 783 aaPredicted RBP19.5■□□□□ 0.71
FDPS-215ENST00000490140 CDK13Q14004 1512 aaKnown RBP19.5■□□□□ 0.71
FDPS-215ENST00000490140 UBTFP17480 764 aaKnown RBP19.49■□□□□ 0.71
FDPS-215ENST00000490140 RIMS1Q86UR5 1692 aaKnown RBP19.48■□□□□ 0.71
FDPS-215ENST00000490140 MYO5CQ9NQX4 1742 aa19.46■□□□□ 0.71
FDPS-215ENST00000490140 PLCH2O75038 1416 aa19.46■□□□□ 0.71
FDPS-215ENST00000490140 KIF14Q15058 1648 aa19.44■□□□□ 0.7
FDPS-215ENST00000490140 CLIP1P30622 1438 aa19.43■□□□□ 0.7
FDPS-215ENST00000490140 ATP1B4Q9UN42 357 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms