RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 KIAA0586Q9BVV6 1533 aa27.56■■■□□ 2
SFXN5-220ENST00000490056 JPH4Q96JJ6 628 aa27.5■■□□□ 1.99
SFXN5-220ENST00000490056 SHROOM2Q13796 1616 aa27.46■■□□□ 1.99
SFXN5-220ENST00000490056 IQGAP2Q13576 1575 aa27.46■■□□□ 1.99
SFXN5-220ENST00000490056 CTTNBP2Q8WZ74 1663 aa27.46■■□□□ 1.99
SFXN5-220ENST00000490056 GOLGA3Q08378 1498 aa27.45■■□□□ 1.99
SFXN5-220ENST00000490056 ARHGEF11O15085 1522 aa27.45■■□□□ 1.98
SFXN5-220ENST00000490056 RIMBP3CA6NJZ7 1639 aa27.43■■□□□ 1.98
SFXN5-220ENST00000490056 RIMBP3BA6NNM3 1639 aa27.43■■□□□ 1.98
SFXN5-220ENST00000490056 RIMBP3Q9UFD9 1639 aa27.43■■□□□ 1.98
SFXN5-220ENST00000490056 UBTFP17480 764 aaKnown RBP27.42■■□□□ 1.98
SFXN5-220ENST00000490056 ERCC6L2Q5T890 1561 aa27.41■■□□□ 1.98
SFXN5-220ENST00000490056 PRG4Q92954 1404 aaPredicted RBP27.41■■□□□ 1.98
SFXN5-220ENST00000490056 UGGT2Q9NYU1 1516 aa27.31■■□□□ 1.96
SFXN5-220ENST00000490056 RANGAP1P46060 587 aaPredicted RBP27.3■■□□□ 1.96
SFXN5-220ENST00000490056 LOC105371045A0A1W2PR82 267 aa27.29■■□□□ 1.96
SFXN5-220ENST00000490056 ARAP1Q96P48 1450 aa27.28■■□□□ 1.96
SFXN5-220ENST00000490056 DISP1Q96F81 1524 aa27.26■■□□□ 1.96
SFXN5-220ENST00000490056 CARMIL2Q6F5E8 1435 aa27.24■■□□□ 1.95
SFXN5-220ENST00000490056 CYB5RLQ6IPT4 315 aa27.24■■□□□ 1.95
SFXN5-220ENST00000490056 TTBK1Q5TCY1 1321 aaPredicted RBP27.19■■□□□ 1.94
SFXN5-220ENST00000490056 P3H3Q8IVL6 736 aa27.19■■□□□ 1.94
SFXN5-220ENST00000490056 KIAA0556O60303 1618 aa27.19■■□□□ 1.94
SFXN5-220ENST00000490056 TNIKQ9UKE5 1360 aa27.18■■□□□ 1.94
SFXN5-220ENST00000490056 PTPRGP23470 1445 aa27.12■■□□□ 1.93
SFXN5-220ENST00000490056 SAMD9Q5K651 1589 aa27.12■■□□□ 1.93
SFXN5-220ENST00000490056 FHOD3Q2V2M9 1422 aa27.05■■□□□ 1.92
SFXN5-220ENST00000490056 ARHGAP35Q9NRY4 1499 aa27.04■■□□□ 1.92
SFXN5-220ENST00000490056 EFCAB5A4FU69 1503 aa27.04■■□□□ 1.92
SFXN5-220ENST00000490056 CLIP1P30622 1438 aa26.99■■□□□ 1.91
SFXN5-220ENST00000490056 CEP162Q5TB80 1403 aa26.96■■□□□ 1.91
SFXN5-220ENST00000490056 UACAQ9BZF9 1416 aa26.93■■□□□ 1.9
SFXN5-220ENST00000490056 PLB1Q6P1J6 1458 aa26.93■■□□□ 1.9
SFXN5-220ENST00000490056 ADCY10Q96PN6 1610 aa26.92■■□□□ 1.9
SFXN5-220ENST00000490056 ABCA8O94911 1581 aa26.88■■□□□ 1.89
SFXN5-220ENST00000490056 ABCC2Q92887 1545 aa26.86■■□□□ 1.89
SFXN5-220ENST00000490056 UHRF1BP1LA0JNW5 1464 aa26.86■■□□□ 1.89
SFXN5-220ENST00000490056 FMN1Q68DA7 1419 aa26.82■■□□□ 1.88
SFXN5-220ENST00000490056 NPM1P06748 294 aaKnown RBP eCLIP26.81■■□□□ 1.88
SFXN5-220ENST00000490056 RAPGEF6Q8TEU7 1601 aa26.8■■□□□ 1.88
SFXN5-220ENST00000490056 ARID3CA6NKF2 412 aa26.79■■□□□ 1.88
SFXN5-220ENST00000490056 ATP1B4Q9UN42 357 aaPredicted RBP26.75■■□□□ 1.87
SFXN5-220ENST00000490056 KDM5BQ9UGL1 1544 aa26.75■■□□□ 1.87
SFXN5-220ENST00000490056 NUP153P49790 1475 aaKnown RBP26.73■■□□□ 1.87
SFXN5-220ENST00000490056 ZCCHC11Q5TAX3 1644 aaKnown RBP26.71■■□□□ 1.87
SFXN5-220ENST00000490056 ATP10BO94823 1461 aa26.69■■□□□ 1.86
SFXN5-220ENST00000490056 PCF11O94913 1555 aaKnown RBP26.67■■□□□ 1.86
SFXN5-220ENST00000490056 CASKIN1Q8WXD9 1431 aa26.66■■□□□ 1.86
SFXN5-220ENST00000490056 HECW1Q76N89 1606 aa26.65■■□□□ 1.86
SFXN5-220ENST00000490056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.64■■□□□ 1.86
SFXN5-220ENST00000490056 HNRNPUL2Q1KMD3 747 aaKnown RBP26.64■■□□□ 1.86
SFXN5-220ENST00000490056 MAPKBP1O60336 1514 aa26.63■■□□□ 1.85
SFXN5-220ENST00000490056 ASXL2Q76L83 1435 aa26.63■■□□□ 1.85
SFXN5-220ENST00000490056 CDK13Q14004 1512 aaKnown RBP26.61■■□□□ 1.85
SFXN5-220ENST00000490056 FYCO1Q9BQS8 1478 aa26.6■■□□□ 1.85
SFXN5-220ENST00000490056 EPRSP07814 1512 aaKnown RBP26.6■■□□□ 1.85
SFXN5-220ENST00000490056 VPS8Q8N3P4 1428 aa26.59■■□□□ 1.85
SFXN5-220ENST00000490056 LRRIQ1Q96JM4 1722 aa26.59■■□□□ 1.85
SFXN5-220ENST00000490056 TRHP20396 242 aaPredicted RBP26.57■■□□□ 1.84
SFXN5-220ENST00000490056 WDR7Q9Y4E6 1490 aa26.52■■□□□ 1.84
SFXN5-220ENST00000490056 PLEKHD1A6NEE1 506 aa26.5■■□□□ 1.83
SFXN5-220ENST00000490056 KCNH8Q96L42 1107 aa26.5■■□□□ 1.83
SFXN5-220ENST00000490056 ABCC10Q5T3U5 1492 aa26.49■■□□□ 1.83
SFXN5-220ENST00000490056 CCDC18Q5T9S5 1454 aa26.49■■□□□ 1.83
SFXN5-220ENST00000490056 FAM69CQ0P6D2 419 aa26.48■■□□□ 1.83
SFXN5-220ENST00000490056 DIP2BQ9P265 1576 aa26.46■■□□□ 1.83
SFXN5-220ENST00000490056 KIF13AQ9H1H9 1805 aa26.44■■□□□ 1.82
SFXN5-220ENST00000490056 CDK11AQ9UQ88 783 aaPredicted RBP26.43■■□□□ 1.82
SFXN5-220ENST00000490056 MAGI3Q5TCQ9 1506 aa26.39■■□□□ 1.81
SFXN5-220ENST00000490056 GLI2P10070 1586 aa26.37■■□□□ 1.81
SFXN5-220ENST00000490056 TROQ12816 1431 aaPredicted RBP26.36■■□□□ 1.81
SFXN5-220ENST00000490056 TIAM1Q13009 1591 aa26.33■■□□□ 1.81
SFXN5-220ENST00000490056 CFAP43Q8NDM7 1665 aa26.33■■□□□ 1.81
SFXN5-220ENST00000490056 MTUS2Q5JR59 1369 aa26.31■■□□□ 1.8
SFXN5-220ENST00000490056 APLP2Q06481 763 aa26.3■■□□□ 1.8
SFXN5-220ENST00000490056 KIF14Q15058 1648 aa26.29■■□□□ 1.8
SFXN5-220ENST00000490056 TSPOAP1O95153 1857 aa26.28■■□□□ 1.8
SFXN5-220ENST00000490056 KANK4Q5T7N3 995 aaPredicted RBP26.28■■□□□ 1.8
SFXN5-220ENST00000490056 MAP3K4Q9Y6R4 1608 aa26.28■■□□□ 1.8
SFXN5-220ENST00000490056 MAP3K1Q13233 1512 aa26.27■■□□□ 1.8
SFXN5-220ENST00000490056 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.27■■□□□ 1.8
SFXN5-220ENST00000490056 ABCA9Q8IUA7 1624 aa26.27■■□□□ 1.8
SFXN5-220ENST00000490056 CD109Q6YHK3 1445 aa26.26■■□□□ 1.79
SFXN5-220ENST00000490056 TTC37Q6PGP7 1564 aa26.24■■□□□ 1.79
SFXN5-220ENST00000490056 EHBP1L1Q8N3D4 1523 aa26.23■■□□□ 1.79
SFXN5-220ENST00000490056 LRRC9Q6ZRR7 1453 aa26.23■■□□□ 1.79
SFXN5-220ENST00000490056 PPRC1Q5VV67 1664 aaKnown RBP26.2■■□□□ 1.78
SFXN5-220ENST00000490056 SUPT6HQ7KZ85 1726 aaKnown RBP26.12■■□□□ 1.77
SFXN5-220ENST00000490056 PPARGC1BQ86YN6 1023 aaKnown RBP26.12■■□□□ 1.77
SFXN5-220ENST00000490056 PLCH2O75038 1416 aa26.11■■□□□ 1.77
SFXN5-220ENST00000490056 MYO5CQ9NQX4 1742 aa26.11■■□□□ 1.77
SFXN5-220ENST00000490056 NCOA2Q15596 1464 aa26.11■■□□□ 1.77
SFXN5-220ENST00000490056 TEX14Q8IWB6 1497 aa26.11■■□□□ 1.77
SFXN5-220ENST00000490056 CCNB3Q8WWL7 1395 aa26.08■■□□□ 1.77
SFXN5-220ENST00000490056 CDC42BPAQ5VT25 1732 aa26.07■■□□□ 1.76
SFXN5-220ENST00000490056 GPATCH8Q9UKJ3 1502 aaKnown RBP26.07■■□□□ 1.76
SFXN5-220ENST00000490056 CDC42BPBQ9Y5S2 1711 aa26.05■■□□□ 1.76
SFXN5-220ENST00000490056 FANCAO15360 1455 aa26.04■■□□□ 1.76
SFXN5-220ENST00000490056 ARHGAP5Q13017 1502 aa26.04■■□□□ 1.76
SFXN5-220ENST00000490056 PREX2Q70Z35 1606 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms