RNA–Protein interactions for RNA: ENST00000489945.5

TRIT1-210, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5

Gene TRIT1, Length 861 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-210ENST00000489945 CHMP7Q8WUX9 453 aaPredicted RBP13.44□□□□□ -0.26
TRIT1-210ENST00000489945 GOLGA3Q08378 1498 aa13.43□□□□□ -0.26
TRIT1-210ENST00000489945 FBLN2P98095 1184 aa13.42□□□□□ -0.26
TRIT1-210ENST00000489945 GRIN2AQ12879 1464 aa13.41□□□□□ -0.26
TRIT1-210ENST00000489945 UBTFP17480 764 aaKnown RBP13.4□□□□□ -0.26
TRIT1-210ENST00000489945 PIAS4Q8N2W9 510 aaPredicted RBP13.39□□□□□ -0.27
TRIT1-210ENST00000489945 CHD1O14646 1710 aa13.36□□□□□ -0.27
TRIT1-210ENST00000489945 TNIKQ9UKE5 1360 aa13.35□□□□□ -0.27
TRIT1-210ENST00000489945 NUP160Q12769 1436 aa13.34□□□□□ -0.27
TRIT1-210ENST00000489945 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
TRIT1-210ENST00000489945 CEP170Q5SW79 1584 aa13.32□□□□□ -0.28
TRIT1-210ENST00000489945 KIAA0586Q9BVV6 1533 aa13.3□□□□□ -0.28
TRIT1-210ENST00000489945 CTTNBP2Q8WZ74 1663 aa13.29□□□□□ -0.28
TRIT1-210ENST00000489945 OSCARQ8IYS5 282 aa13.29□□□□□ -0.28
TRIT1-210ENST00000489945 IQGAP2Q13576 1575 aa13.26□□□□□ -0.29
TRIT1-210ENST00000489945 JPH4Q96JJ6 628 aa13.24□□□□□ -0.29
TRIT1-210ENST00000489945 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
TRIT1-210ENST00000489945 RANGAP1P46060 587 aaPredicted RBP13.23□□□□□ -0.29
TRIT1-210ENST00000489945 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
TRIT1-210ENST00000489945 DNAJC5Q9H3Z4 198 aa13.21□□□□□ -0.29
TRIT1-210ENST00000489945 UGGT2Q9NYU1 1516 aa13.21□□□□□ -0.29
TRIT1-210ENST00000489945 CLIP1P30622 1438 aa13.21□□□□□ -0.3
TRIT1-210ENST00000489945 SLC4A1APQ9BWU0 796 aaKnown RBP13.2□□□□□ -0.3
TRIT1-210ENST00000489945 SHROOM2Q13796 1616 aa13.17□□□□□ -0.3
TRIT1-210ENST00000489945 EFCAB5A4FU69 1503 aa13.17□□□□□ -0.3
TRIT1-210ENST00000489945 ARHGAP35Q9NRY4 1499 aa13.16□□□□□ -0.3
TRIT1-210ENST00000489945 SAMD9Q5K651 1589 aa13.15□□□□□ -0.3
TRIT1-210ENST00000489945 CARMIL2Q6F5E8 1435 aa13.15□□□□□ -0.3
TRIT1-210ENST00000489945 PRG4Q92954 1404 aaPredicted RBP13.15□□□□□ -0.3
TRIT1-210ENST00000489945 DISP1Q96F81 1524 aa13.15□□□□□ -0.3
TRIT1-210ENST00000489945 P3H3Q8IVL6 736 aa13.15□□□□□ -0.3
TRIT1-210ENST00000489945 KIAA0556O60303 1618 aa13.13□□□□□ -0.31
TRIT1-210ENST00000489945 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
TRIT1-210ENST00000489945 FHOD3Q2V2M9 1422 aa13.11□□□□□ -0.31
TRIT1-210ENST00000489945 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
TRIT1-210ENST00000489945 ERCC6L2Q5T890 1561 aa13.09□□□□□ -0.31
TRIT1-210ENST00000489945 FMN1Q68DA7 1419 aa13.06□□□□□ -0.32
TRIT1-210ENST00000489945 PTPRGP23470 1445 aa13.05□□□□□ -0.32
TRIT1-210ENST00000489945 VPS8Q8N3P4 1428 aa13.05□□□□□ -0.32
TRIT1-210ENST00000489945 TTBK1Q5TCY1 1321 aaPredicted RBP13.04□□□□□ -0.32
TRIT1-210ENST00000489945 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
TRIT1-210ENST00000489945 CASKIN1Q8WXD9 1431 aa12.99□□□□□ -0.33
TRIT1-210ENST00000489945 RIMBP3CA6NJZ7 1639 aa12.99□□□□□ -0.33
TRIT1-210ENST00000489945 RIMBP3BA6NNM3 1639 aa12.99□□□□□ -0.33
TRIT1-210ENST00000489945 RIMBP3Q9UFD9 1639 aa12.99□□□□□ -0.33
TRIT1-210ENST00000489945 NPM3O75607 178 aaKnown RBP12.98□□□□□ -0.33
TRIT1-210ENST00000489945 PLB1Q6P1J6 1458 aa12.97□□□□□ -0.33
TRIT1-210ENST00000489945 UACAQ9BZF9 1416 aa12.97□□□□□ -0.33
TRIT1-210ENST00000489945 ATP1B4Q9UN42 357 aaPredicted RBP12.97□□□□□ -0.33
TRIT1-210ENST00000489945 ABCA8O94911 1581 aa12.97□□□□□ -0.33
TRIT1-210ENST00000489945 FYCO1Q9BQS8 1478 aa12.97□□□□□ -0.33
TRIT1-210ENST00000489945 RAPGEF6Q8TEU7 1601 aa12.96□□□□□ -0.33
TRIT1-210ENST00000489945 PCF11O94913 1555 aaKnown RBP12.96□□□□□ -0.33
TRIT1-210ENST00000489945 HECW1Q76N89 1606 aa12.94□□□□□ -0.34
TRIT1-210ENST00000489945 UHRF1BP1LA0JNW5 1464 aa12.93□□□□□ -0.34
TRIT1-210ENST00000489945 APLP2Q06481 763 aa12.93□□□□□ -0.34
TRIT1-210ENST00000489945 CYB5RLQ6IPT4 315 aa12.93□□□□□ -0.34
TRIT1-210ENST00000489945 ABCC2Q92887 1545 aa12.93□□□□□ -0.34
TRIT1-210ENST00000489945 NUP153P49790 1475 aaKnown RBP12.92□□□□□ -0.34
TRIT1-210ENST00000489945 EPRSP07814 1512 aaKnown RBP12.9□□□□□ -0.34
TRIT1-210ENST00000489945 CCDC18Q5T9S5 1454 aa12.9□□□□□ -0.34
TRIT1-210ENST00000489945 MAP3K1Q13233 1512 aa12.89□□□□□ -0.35
TRIT1-210ENST00000489945 ARID3CA6NKF2 412 aa12.89□□□□□ -0.35
TRIT1-210ENST00000489945 ADCY10Q96PN6 1610 aa12.88□□□□□ -0.35
TRIT1-210ENST00000489945 ATP10BO94823 1461 aa12.88□□□□□ -0.35
TRIT1-210ENST00000489945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
TRIT1-210ENST00000489945 HNRNPUL2Q1KMD3 747 aaKnown RBP12.87□□□□□ -0.35
TRIT1-210ENST00000489945 LRRIQ1Q96JM4 1722 aa12.87□□□□□ -0.35
TRIT1-210ENST00000489945 KDM5BQ9UGL1 1544 aa12.87□□□□□ -0.35
TRIT1-210ENST00000489945 NPM1P06748 294 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRIT1-210ENST00000489945 CDK13Q14004 1512 aaKnown RBP12.86□□□□□ -0.35
TRIT1-210ENST00000489945 TIAM1Q13009 1591 aa12.86□□□□□ -0.35
TRIT1-210ENST00000489945 CDK11AQ9UQ88 783 aaPredicted RBP12.85□□□□□ -0.35
TRIT1-210ENST00000489945 KANK4Q5T7N3 995 aaPredicted RBP12.84□□□□□ -0.35
TRIT1-210ENST00000489945 CFAP43Q8NDM7 1665 aa12.83□□□□□ -0.35
TRIT1-210ENST00000489945 PLEKHD1A6NEE1 506 aa12.83□□□□□ -0.36
TRIT1-210ENST00000489945 ZCCHC11Q5TAX3 1644 aaKnown RBP12.82□□□□□ -0.36
TRIT1-210ENST00000489945 LRRC9Q6ZRR7 1453 aa12.82□□□□□ -0.36
TRIT1-210ENST00000489945 PPARGC1BQ86YN6 1023 aaKnown RBP12.81□□□□□ -0.36
TRIT1-210ENST00000489945 MTUS2Q5JR59 1369 aa12.81□□□□□ -0.36
TRIT1-210ENST00000489945 MAGI3Q5TCQ9 1506 aa12.79□□□□□ -0.36
TRIT1-210ENST00000489945 TROQ12816 1431 aaPredicted RBP12.79□□□□□ -0.36
TRIT1-210ENST00000489945 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
TRIT1-210ENST00000489945 CNKSR2Q8WXI2 1034 aa12.78□□□□□ -0.36
TRIT1-210ENST00000489945 ASXL2Q76L83 1435 aa12.76□□□□□ -0.37
TRIT1-210ENST00000489945 MAPKBP1O60336 1514 aa12.75□□□□□ -0.37
TRIT1-210ENST00000489945 WDR7Q9Y4E6 1490 aa12.75□□□□□ -0.37
TRIT1-210ENST00000489945 SCAF1Q9H7N4 1312 aaKnown RBP12.73□□□□□ -0.37
TRIT1-210ENST00000489945 KCNH8Q96L42 1107 aa12.73□□□□□ -0.37
TRIT1-210ENST00000489945 SUPT6HQ7KZ85 1726 aaKnown RBP12.72□□□□□ -0.37
TRIT1-210ENST00000489945 NCOA2Q15596 1464 aa12.72□□□□□ -0.37
TRIT1-210ENST00000489945 KIF14Q15058 1648 aa12.7□□□□□ -0.38
TRIT1-210ENST00000489945 ZBTB22O15209 634 aa12.69□□□□□ -0.38
TRIT1-210ENST00000489945 ABCC10Q5T3U5 1492 aa12.69□□□□□ -0.38
TRIT1-210ENST00000489945 PHLDB1Q86UU1 1377 aa12.69□□□□□ -0.38
TRIT1-210ENST00000489945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.67□□□□□ -0.382e-6■■■■■ 51.7
TRIT1-210ENST00000489945 CCNB3Q8WWL7 1395 aa12.67□□□□□ -0.38
TRIT1-210ENST00000489945 GPATCH8Q9UKJ3 1502 aaKnown RBP12.65□□□□□ -0.38
TRIT1-210ENST00000489945 ABCA9Q8IUA7 1624 aa12.65□□□□□ -0.38
TRIT1-210ENST00000489945 MYOM3Q5VTT5 1437 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms