RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 ADAMTS12P58397 1594 aa10.27□□□□□ -0.76
CNOT9-207ENST00000489687 CYB5RLQ6IPT4 315 aa10.27□□□□□ -0.77
CNOT9-207ENST00000489687 CHMP7Q8WUX9 453 aaPredicted RBP10.26□□□□□ -0.77
CNOT9-207ENST00000489687 CEP170Q5SW79 1584 aa10.22□□□□□ -0.77
CNOT9-207ENST00000489687 SLC4A1APQ9BWU0 796 aaKnown RBP10.22□□□□□ -0.77
CNOT9-207ENST00000489687 GRIN2AQ12879 1464 aa10.22□□□□□ -0.77
CNOT9-207ENST00000489687 ERCC6L2Q5T890 1561 aa10.22□□□□□ -0.77
CNOT9-207ENST00000489687 ERICH3Q5RHP9 1530 aa10.17□□□□□ -0.78
CNOT9-207ENST00000489687 FHAD1B1AJZ9 1412 aa10.16□□□□□ -0.78
CNOT9-207ENST00000489687 NUP160Q12769 1436 aa10.16□□□□□ -0.78
CNOT9-207ENST00000489687 TRHP20396 242 aaPredicted RBP10.14□□□□□ -0.79
CNOT9-207ENST00000489687 SHROOM2Q13796 1616 aa10.14□□□□□ -0.79
CNOT9-207ENST00000489687 RUSC2Q8N2Y8 1516 aa10.13□□□□□ -0.79
CNOT9-207ENST00000489687 NPM3O75607 178 aaKnown RBP10.13□□□□□ -0.79
CNOT9-207ENST00000489687 EHMT2Q96KQ7 1210 aa10.11□□□□□ -0.79
CNOT9-207ENST00000489687 PRG4Q92954 1404 aaPredicted RBP10.07□□□□□ -0.8
CNOT9-207ENST00000489687 CUL7Q14999 1698 aa10.06□□□□□ -0.8
CNOT9-207ENST00000489687 KIF27Q86VH2 1401 aa10.05□□□□□ -0.8
CNOT9-207ENST00000489687 IGF1RP08069 1367 aa10.02□□□□□ -0.8
CNOT9-207ENST00000489687 RNF216Q9NWF9 866 aaPredicted RBP10.02□□□□□ -0.81
CNOT9-207ENST00000489687 KIF13AQ9H1H9 1805 aa10□□□□□ -0.81
CNOT9-207ENST00000489687 ADCY10Q96PN6 1610 aa10□□□□□ -0.81
CNOT9-207ENST00000489687 JPH4Q96JJ6 628 aa9.99□□□□□ -0.81
CNOT9-207ENST00000489687 KIAA0586Q9BVV6 1533 aa9.98□□□□□ -0.81
CNOT9-207ENST00000489687 TTBK1Q5TCY1 1321 aaPredicted RBP9.98□□□□□ -0.81
CNOT9-207ENST00000489687 CARMIL1Q5VZK9 1371 aa9.97□□□□□ -0.81
CNOT9-207ENST00000489687 IQGAP2Q13576 1575 aa9.96□□□□□ -0.82
CNOT9-207ENST00000489687 DIP2BQ9P265 1576 aa9.92□□□□□ -0.82
CNOT9-207ENST00000489687 DMRT2Q9Y5R5 561 aa9.92□□□□□ -0.82
CNOT9-207ENST00000489687 MAPKBP1O60336 1514 aa9.91□□□□□ -0.82
CNOT9-207ENST00000489687 TSPOAP1O95153 1857 aa9.9□□□□□ -0.82
CNOT9-207ENST00000489687 DISP1Q96F81 1524 aa9.9□□□□□ -0.82
CNOT9-207ENST00000489687 RAPGEF2Q9Y4G8 1499 aa9.9□□□□□ -0.83
CNOT9-207ENST00000489687 CTTNBP2Q8WZ74 1663 aa9.9□□□□□ -0.83
CNOT9-207ENST00000489687 KIAA0556O60303 1618 aa9.89□□□□□ -0.83
CNOT9-207ENST00000489687 ABCC10Q5T3U5 1492 aa9.88□□□□□ -0.83
CNOT9-207ENST00000489687 PTPRGP23470 1445 aa9.88□□□□□ -0.83
CNOT9-207ENST00000489687 CARMIL2Q6F5E8 1435 aa9.87□□□□□ -0.83
CNOT9-207ENST00000489687 TNIKQ9UKE5 1360 aa9.87□□□□□ -0.83
CNOT9-207ENST00000489687 FAM69CQ0P6D2 419 aa9.86□□□□□ -0.83
CNOT9-207ENST00000489687 ABCC2Q92887 1545 aa9.86□□□□□ -0.83
CNOT9-207ENST00000489687 UGGT2Q9NYU1 1516 aa9.86□□□□□ -0.83
CNOT9-207ENST00000489687 NPM1P06748 294 aaKnown RBP eCLIP9.84□□□□□ -0.83
CNOT9-207ENST00000489687 CSRNP3Q8WYN3 585 aa9.84□□□□□ -0.83
CNOT9-207ENST00000489687 ZCCHC11Q5TAX3 1644 aaKnown RBP9.83□□□□□ -0.84
CNOT9-207ENST00000489687 HOXD11P31277 338 aaPredicted RBP9.83□□□□□ -0.84
CNOT9-207ENST00000489687 MAPK8IP2Q13387 824 aaPredicted RBP9.83□□□□□ -0.84
CNOT9-207ENST00000489687 ASXL2Q76L83 1435 aa9.82□□□□□ -0.84
CNOT9-207ENST00000489687 PRXQ9BXM0 1461 aa9.82□□□□□ -0.84
CNOT9-207ENST00000489687 KDM6BO15054 1643 aa9.82□□□□□ -0.84
CNOT9-207ENST00000489687 PPRC1Q5VV67 1664 aaKnown RBP9.81□□□□□ -0.84
CNOT9-207ENST00000489687 PLB1Q6P1J6 1458 aa9.81□□□□□ -0.84
CNOT9-207ENST00000489687 UACAQ9BZF9 1416 aa9.81□□□□□ -0.84
CNOT9-207ENST00000489687 UHRF1BP1LA0JNW5 1464 aa9.8□□□□□ -0.84
CNOT9-207ENST00000489687 FOXD4L1Q9NU39 408 aa9.78□□□□□ -0.84
CNOT9-207ENST00000489687 KDM5BQ9UGL1 1544 aa9.77□□□□□ -0.84
CNOT9-207ENST00000489687 ARID3CA6NKF2 412 aa9.76□□□□□ -0.85
CNOT9-207ENST00000489687 EPRSP07814 1512 aaKnown RBP9.76□□□□□ -0.85
CNOT9-207ENST00000489687 ABCA8O94911 1581 aa9.75□□□□□ -0.85
CNOT9-207ENST00000489687 MAP3K4Q9Y6R4 1608 aa9.75□□□□□ -0.85
CNOT9-207ENST00000489687 GOLGA3Q08378 1498 aa9.75□□□□□ -0.85
CNOT9-207ENST00000489687 FAM9AQ8IZU1 332 aaPredicted RBP9.75□□□□□ -0.85
CNOT9-207ENST00000489687 GLI2P10070 1586 aa9.75□□□□□ -0.85
CNOT9-207ENST00000489687 WDR7Q9Y4E6 1490 aa9.74□□□□□ -0.85
CNOT9-207ENST00000489687 RANGAP1P46060 587 aaPredicted RBP9.74□□□□□ -0.85
CNOT9-207ENST00000489687 P3H3Q8IVL6 736 aa9.74□□□□□ -0.85
CNOT9-207ENST00000489687 SAMD9Q5K651 1589 aa9.73□□□□□ -0.85
CNOT9-207ENST00000489687 COL17A1Q9UMD9 1497 aaPredicted RBP9.71□□□□□ -0.86
CNOT9-207ENST00000489687 FHOD3Q2V2M9 1422 aa9.7□□□□□ -0.86
CNOT9-207ENST00000489687 PELP1Q8IZL8 1130 aaKnown RBP9.69□□□□□ -0.86
CNOT9-207ENST00000489687 KIF21BO75037 1637 aa9.68□□□□□ -0.86
CNOT9-207ENST00000489687 RAPGEF6Q8TEU7 1601 aa9.68□□□□□ -0.86
CNOT9-207ENST00000489687 CFAP43Q8NDM7 1665 aa9.67□□□□□ -0.86
CNOT9-207ENST00000489687 KCNH8Q96L42 1107 aa9.67□□□□□ -0.86
CNOT9-207ENST00000489687 TEX14Q8IWB6 1497 aa9.66□□□□□ -0.86
CNOT9-207ENST00000489687 EEA1Q15075 1411 aa9.66□□□□□ -0.86
CNOT9-207ENST00000489687 ATP10BO94823 1461 aa9.65□□□□□ -0.87
CNOT9-207ENST00000489687 NUP153P49790 1475 aaKnown RBP9.65□□□□□ -0.87
CNOT9-207ENST00000489687 KDM4FA0A1W2PPD8 638 aa9.64□□□□□ -0.87
CNOT9-207ENST00000489687 ADGRL1O94910 1474 aa9.64□□□□□ -0.87
CNOT9-207ENST00000489687 CD109Q6YHK3 1445 aa9.64□□□□□ -0.87
CNOT9-207ENST00000489687 ABCA9Q8IUA7 1624 aa9.62□□□□□ -0.87
CNOT9-207ENST00000489687 EFCAB5A4FU69 1503 aa9.61□□□□□ -0.87
CNOT9-207ENST00000489687 CDK13Q14004 1512 aaKnown RBP9.61□□□□□ -0.87
CNOT9-207ENST00000489687 MAGI3Q5TCQ9 1506 aa9.61□□□□□ -0.87
CNOT9-207ENST00000489687 TTC37Q6PGP7 1564 aa9.59□□□□□ -0.87
CNOT9-207ENST00000489687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.59□□□□□ -0.87
CNOT9-207ENST00000489687 MYT1Q01538 1121 aa9.59□□□□□ -0.87
CNOT9-207ENST00000489687 HNRNPUL2Q1KMD3 747 aaKnown RBP9.59□□□□□ -0.87
CNOT9-207ENST00000489687 FRMPD1Q5SYB0 1578 aa9.58□□□□□ -0.88
CNOT9-207ENST00000489687 ATXN8OSP0DMR3 200 aa9.57□□□□□ -0.88
CNOT9-207ENST00000489687 ARHGAP35Q9NRY4 1499 aa9.56□□□□□ -0.88
CNOT9-207ENST00000489687 UBTFP17480 764 aaKnown RBP9.56□□□□□ -0.88
CNOT9-207ENST00000489687 MYCNP04198 464 aaPredicted RBP9.55□□□□□ -0.88
CNOT9-207ENST00000489687 LRRIQ1Q96JM4 1722 aa9.55□□□□□ -0.88
CNOT9-207ENST00000489687 HECW1Q76N89 1606 aa9.54□□□□□ -0.88
CNOT9-207ENST00000489687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.54□□□□□ -0.88
CNOT9-207ENST00000489687 ARAP3Q8WWN8 1544 aa9.54□□□□□ -0.88
CNOT9-207ENST00000489687 KIF14Q15058 1648 aa9.53□□□□□ -0.88
CNOT9-207ENST00000489687 ZBTB22O15209 634 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms