RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 RIMBP3CA6NJZ7 1639 aa25.17■■□□□ 1.62
FDPS-213ENST00000489003 RIMBP3BA6NNM3 1639 aa25.17■■□□□ 1.62
FDPS-213ENST00000489003 RIMBP3Q9UFD9 1639 aa25.17■■□□□ 1.62
FDPS-213ENST00000489003 KIAA0586Q9BVV6 1533 aa25.15■■□□□ 1.62
FDPS-213ENST00000489003 SHROOM2Q13796 1616 aa25.09■■□□□ 1.61
FDPS-213ENST00000489003 CYB5RLQ6IPT4 315 aa25.05■■□□□ 1.6
FDPS-213ENST00000489003 ERCC6L2Q5T890 1561 aa25.05■■□□□ 1.6
FDPS-213ENST00000489003 PRG4Q92954 1404 aaPredicted RBP25.03■■□□□ 1.6
FDPS-213ENST00000489003 ARAP1Q96P48 1450 aa25■■□□□ 1.59
FDPS-213ENST00000489003 IQGAP2Q13576 1575 aa24.99■■□□□ 1.59
FDPS-213ENST00000489003 KIF21BO75037 1637 aa24.98■■□□□ 1.59
FDPS-213ENST00000489003 EHMT2Q96KQ7 1210 aa24.96■■□□□ 1.59
FDPS-213ENST00000489003 CTTNBP2Q8WZ74 1663 aa24.96■■□□□ 1.59
FDPS-213ENST00000489003 UGGT2Q9NYU1 1516 aa24.89■■□□□ 1.57
FDPS-213ENST00000489003 UBTFP17480 764 aaKnown RBP24.88■■□□□ 1.57
FDPS-213ENST00000489003 GOLGA3Q08378 1498 aa24.87■■□□□ 1.57
FDPS-213ENST00000489003 CARMIL2Q6F5E8 1435 aa24.86■■□□□ 1.57
FDPS-213ENST00000489003 DISP1Q96F81 1524 aa24.85■■□□□ 1.57
FDPS-213ENST00000489003 TNIKQ9UKE5 1360 aa24.8■■□□□ 1.56
FDPS-213ENST00000489003 TTBK1Q5TCY1 1321 aaPredicted RBP24.79■■□□□ 1.56
FDPS-213ENST00000489003 RANGAP1P46060 587 aaPredicted RBP24.78■■□□□ 1.56
FDPS-213ENST00000489003 PTPRGP23470 1445 aa24.78■■□□□ 1.56
FDPS-213ENST00000489003 KIAA0556O60303 1618 aa24.75■■□□□ 1.55
FDPS-213ENST00000489003 P3H3Q8IVL6 736 aa24.75■■□□□ 1.55
FDPS-213ENST00000489003 LOC105371045A0A1W2PR82 267 aa24.67■■□□□ 1.54
FDPS-213ENST00000489003 SAMD9Q5K651 1589 aa24.67■■□□□ 1.54
FDPS-213ENST00000489003 UACAQ9BZF9 1416 aa24.61■■□□□ 1.53
FDPS-213ENST00000489003 ADCY10Q96PN6 1610 aa24.59■■□□□ 1.53
FDPS-213ENST00000489003 NPM1P06748 294 aaKnown RBP eCLIP24.58■■□□□ 1.533e-6■□□□□ 8.1
FDPS-213ENST00000489003 EFCAB5A4FU69 1503 aa24.56■■□□□ 1.52
FDPS-213ENST00000489003 FHOD3Q2V2M9 1422 aa24.56■■□□□ 1.52
FDPS-213ENST00000489003 UHRF1BP1LA0JNW5 1464 aa24.55■■□□□ 1.52
FDPS-213ENST00000489003 PLB1Q6P1J6 1458 aa24.54■■□□□ 1.52
FDPS-213ENST00000489003 ARHGAP35Q9NRY4 1499 aa24.54■■□□□ 1.52
FDPS-213ENST00000489003 ABCC2Q92887 1545 aa24.51■■□□□ 1.51
FDPS-213ENST00000489003 ABCA8O94911 1581 aa24.5■■□□□ 1.51
FDPS-213ENST00000489003 TRHP20396 242 aaPredicted RBP24.45■■□□□ 1.5
FDPS-213ENST00000489003 CLIP1P30622 1438 aa24.44■■□□□ 1.5
FDPS-213ENST00000489003 KDM5BQ9UGL1 1544 aa24.44■■□□□ 1.5
FDPS-213ENST00000489003 RAPGEF6Q8TEU7 1601 aa24.39■■□□□ 1.5
FDPS-213ENST00000489003 ARID3CA6NKF2 412 aa24.38■■□□□ 1.49
FDPS-213ENST00000489003 MAPKBP1O60336 1514 aa24.38■■□□□ 1.49
FDPS-213ENST00000489003 CEP162Q5TB80 1403 aa24.37■■□□□ 1.49
FDPS-213ENST00000489003 FMN1Q68DA7 1419 aa24.37■■□□□ 1.49
FDPS-213ENST00000489003 ZCCHC11Q5TAX3 1644 aaKnown RBP24.37■■□□□ 1.49
FDPS-213ENST00000489003 ATP10BO94823 1461 aa24.36■■□□□ 1.49
FDPS-213ENST00000489003 ASXL2Q76L83 1435 aa24.33■■□□□ 1.49
FDPS-213ENST00000489003 NUP153P49790 1475 aaKnown RBP24.32■■□□□ 1.48
FDPS-213ENST00000489003 ATP1B4Q9UN42 357 aaPredicted RBP24.32■■□□□ 1.48
FDPS-213ENST00000489003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.29■■□□□ 1.48
FDPS-213ENST00000489003 FAM69CQ0P6D2 419 aa24.29■■□□□ 1.48
FDPS-213ENST00000489003 HNRNPUL2Q1KMD3 747 aaKnown RBP24.29■■□□□ 1.48
FDPS-213ENST00000489003 ABCC10Q5T3U5 1492 aa24.28■■□□□ 1.48
FDPS-213ENST00000489003 KIF13AQ9H1H9 1805 aa24.26■■□□□ 1.47
FDPS-213ENST00000489003 KCNH8Q96L42 1107 aa24.23■■□□□ 1.47
FDPS-213ENST00000489003 CASKIN1Q8WXD9 1431 aa24.23■■□□□ 1.47
FDPS-213ENST00000489003 DIP2BQ9P265 1576 aa24.21■■□□□ 1.47
FDPS-213ENST00000489003 WDR7Q9Y4E6 1490 aa24.2■■□□□ 1.47
FDPS-213ENST00000489003 PLEKHD1A6NEE1 506 aa24.19■■□□□ 1.46
FDPS-213ENST00000489003 HECW1Q76N89 1606 aa24.19■■□□□ 1.46
FDPS-213ENST00000489003 EPRSP07814 1512 aaKnown RBP24.19■■□□□ 1.46
FDPS-213ENST00000489003 PCF11O94913 1555 aaKnown RBP24.16■■□□□ 1.46
FDPS-213ENST00000489003 CDK13Q14004 1512 aaKnown RBP24.16■■□□□ 1.46
FDPS-213ENST00000489003 LRRIQ1Q96JM4 1722 aa24.15■■□□□ 1.46
FDPS-213ENST00000489003 GLI2P10070 1586 aa24.15■■□□□ 1.46
FDPS-213ENST00000489003 FYCO1Q9BQS8 1478 aa24.13■■□□□ 1.45
FDPS-213ENST00000489003 CDK11AQ9UQ88 783 aaPredicted RBP24.11■■□□□ 1.45
FDPS-213ENST00000489003 TSPOAP1O95153 1857 aa24.08■■□□□ 1.45
FDPS-213ENST00000489003 VPS8Q8N3P4 1428 aa24.06■■□□□ 1.44
FDPS-213ENST00000489003 CCDC18Q5T9S5 1454 aa24.06■■□□□ 1.44
FDPS-213ENST00000489003 MAP3K4Q9Y6R4 1608 aa24.03■■□□□ 1.44
FDPS-213ENST00000489003 CD109Q6YHK3 1445 aa24.01■■□□□ 1.43
FDPS-213ENST00000489003 TROQ12816 1431 aaPredicted RBP24■■□□□ 1.43
FDPS-213ENST00000489003 CFAP43Q8NDM7 1665 aa23.99■■□□□ 1.43
FDPS-213ENST00000489003 PPRC1Q5VV67 1664 aaKnown RBP23.99■■□□□ 1.43
FDPS-213ENST00000489003 ABCA9Q8IUA7 1624 aa23.98■■□□□ 1.43
FDPS-213ENST00000489003 MAGI3Q5TCQ9 1506 aa23.96■■□□□ 1.43
FDPS-213ENST00000489003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.94■■□□□ 1.426e-8■■■■□ 20.3
FDPS-213ENST00000489003 KIF14Q15058 1648 aa23.9■■□□□ 1.42
FDPS-213ENST00000489003 TEX14Q8IWB6 1497 aa23.88■■□□□ 1.41
FDPS-213ENST00000489003 TTC37Q6PGP7 1564 aa23.88■■□□□ 1.41
FDPS-213ENST00000489003 MTUS2Q5JR59 1369 aa23.88■■□□□ 1.41
FDPS-213ENST00000489003 TIAM1Q13009 1591 aa23.86■■□□□ 1.41
FDPS-213ENST00000489003 MAP3K1Q13233 1512 aa23.84■■□□□ 1.41
FDPS-213ENST00000489003 APLP2Q06481 763 aa23.84■■□□□ 1.41
FDPS-213ENST00000489003 KANK4Q5T7N3 995 aaPredicted RBP23.84■■□□□ 1.41
FDPS-213ENST00000489003 PLCH2O75038 1416 aa23.84■■□□□ 1.41
FDPS-213ENST00000489003 COL17A1Q9UMD9 1497 aaPredicted RBP23.81■■□□□ 1.4
FDPS-213ENST00000489003 PHLDB1Q86UU1 1377 aa23.78■■□□□ 1.4
FDPS-213ENST00000489003 KDM6BO15054 1643 aa23.78■■□□□ 1.4
FDPS-213ENST00000489003 EFCAB2Q5VUJ9 269 aa23.78■■□□□ 1.4
FDPS-213ENST00000489003 LRRC9Q6ZRR7 1453 aa23.78■■□□□ 1.4
FDPS-213ENST00000489003 MYO5CQ9NQX4 1742 aa23.78■■□□□ 1.4
FDPS-213ENST00000489003 EHBP1L1Q8N3D4 1523 aa23.78■■□□□ 1.4
FDPS-213ENST00000489003 NEO1Q92859 1461 aa23.77■■□□□ 1.4
FDPS-213ENST00000489003 AKNAQ7Z591 1439 aa23.75■■□□□ 1.39
FDPS-213ENST00000489003 FANCAO15360 1455 aa23.75■■□□□ 1.39
FDPS-213ENST00000489003 CDC42BPBQ9Y5S2 1711 aa23.74■■□□□ 1.39
FDPS-213ENST00000489003 ARAP3Q8WWN8 1544 aa23.73■■□□□ 1.39
FDPS-213ENST00000489003 GPATCH8Q9UKJ3 1502 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms