RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 GRIN2BQ13224 1484 aa5.25□□□□□ -1.57
DEPDC1-203ENST00000488146 ABCA10Q8WWZ4 1543 aa5.25□□□□□ -1.57
DEPDC1-203ENST00000488146 BIVM-ERCC5R4GMW8 1640 aa5.25□□□□□ -1.57
DEPDC1-203ENST00000488146 ARAP1Q96P48 1450 aa5.24□□□□□ -1.57
DEPDC1-203ENST00000488146 POLA1P09884 1462 aaPredicted RBP5.23□□□□□ -1.57
DEPDC1-203ENST00000488146 ERICH3Q5RHP9 1530 aa5.23□□□□□ -1.57
DEPDC1-203ENST00000488146 FOXD4L1Q9NU39 408 aa5.22□□□□□ -1.57
DEPDC1-203ENST00000488146 NUP160Q12769 1436 aa5.22□□□□□ -1.57
DEPDC1-203ENST00000488146 ADAMTS12P58397 1594 aa5.21□□□□□ -1.57
DEPDC1-203ENST00000488146 MAPKBP1O60336 1514 aa5.2□□□□□ -1.58
DEPDC1-203ENST00000488146 CAPN15O75808 1086 aa5.2□□□□□ -1.58
DEPDC1-203ENST00000488146 RTN4Q9NQC3 1192 aaKnown RBP5.2□□□□□ -1.58
DEPDC1-203ENST00000488146 ZNF608Q9ULD9 1512 aaPredicted RBP5.19□□□□□ -1.58
DEPDC1-203ENST00000488146 SPINK5Q9NQ38 1064 aaPredicted RBP5.19□□□□□ -1.58
DEPDC1-203ENST00000488146 TOP2BQ02880 1626 aa5.18□□□□□ -1.58
DEPDC1-203ENST00000488146 SLC4A2P04920 1241 aa5.18□□□□□ -1.58
DEPDC1-203ENST00000488146 GLI2P10070 1586 aa5.17□□□□□ -1.58
DEPDC1-203ENST00000488146 CUX1P39880 1505 aa5.17□□□□□ -1.58
DEPDC1-203ENST00000488146 SNAPC4Q5SXM2 1469 aa5.17□□□□□ -1.58
DEPDC1-203ENST00000488146 CUL7Q14999 1698 aa5.17□□□□□ -1.58
DEPDC1-203ENST00000488146 DSG3P32926 999 aa5.17□□□□□ -1.58
DEPDC1-203ENST00000488146 FGD5Q6ZNL6 1462 aa5.16□□□□□ -1.58
DEPDC1-203ENST00000488146 FHAD1B1AJZ9 1412 aa5.16□□□□□ -1.58
DEPDC1-203ENST00000488146 SOGA1O94964 1423 aa5.16□□□□□ -1.58
DEPDC1-203ENST00000488146 GRIN2AQ12879 1464 aa5.15□□□□□ -1.58
DEPDC1-203ENST00000488146 GAPVD1Q14C86 1478 aa5.15□□□□□ -1.59
DEPDC1-203ENST00000488146 UHRF1BP1LA0JNW5 1464 aa5.14□□□□□ -1.59
DEPDC1-203ENST00000488146 APLP2Q06481 763 aa5.13□□□□□ -1.59
DEPDC1-203ENST00000488146 RUSC2Q8N2Y8 1516 aa5.13□□□□□ -1.59
DEPDC1-203ENST00000488146 CEP170Q5SW79 1584 aa5.13□□□□□ -1.59
DEPDC1-203ENST00000488146 KIF13AQ9H1H9 1805 aa5.12□□□□□ -1.59
DEPDC1-203ENST00000488146 KIAA0586Q9BVV6 1533 aa5.12□□□□□ -1.59
DEPDC1-203ENST00000488146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.12□□□□□ -1.59
DEPDC1-203ENST00000488146 HNRNPUL2Q1KMD3 747 aaKnown RBP5.12□□□□□ -1.59
DEPDC1-203ENST00000488146 WRNQ14191 1432 aaPredicted RBP eCLIP5.11□□□□□ -1.59
DEPDC1-203ENST00000488146 TRHP20396 242 aaPredicted RBP5.11□□□□□ -1.59
DEPDC1-203ENST00000488146 ZNF219Q9P2Y4 722 aaPredicted RBP5.1□□□□□ -1.59
DEPDC1-203ENST00000488146 ABCC10Q5T3U5 1492 aa5.1□□□□□ -1.59
DEPDC1-203ENST00000488146 DIP2BQ9P265 1576 aa5.09□□□□□ -1.59
DEPDC1-203ENST00000488146 AQRO60306 1485 aaKnown RBP eCLIP5.09□□□□□ -1.59
DEPDC1-203ENST00000488146 FKBP8Q14318 412 aa5.09□□□□□ -1.6
DEPDC1-203ENST00000488146 SAMD1Q6SPF0 538 aaPredicted RBP5.09□□□□□ -1.6
DEPDC1-203ENST00000488146 SLC24A1O60721 1099 aa5.08□□□□□ -1.6
DEPDC1-203ENST00000488146 ABCB7O75027 752 aa5.08□□□□□ -1.6
DEPDC1-203ENST00000488146 TRIM41Q8WV44 630 aa5.07□□□□□ -1.6
DEPDC1-203ENST00000488146 ERCC6L2Q5T890 1561 aa5.07□□□□□ -1.6
DEPDC1-203ENST00000488146 RAD54L2Q9Y4B4 1467 aa5.06□□□□□ -1.6
DEPDC1-203ENST00000488146 PHLDB1Q86UU1 1377 aa5.06□□□□□ -1.6
DEPDC1-203ENST00000488146 PLB1Q6P1J6 1458 aa5.05□□□□□ -1.6
DEPDC1-203ENST00000488146 MAP3K4Q9Y6R4 1608 aa5.05□□□□□ -1.6
DEPDC1-203ENST00000488146 UGGT2Q9NYU1 1516 aa5.04□□□□□ -1.6
DEPDC1-203ENST00000488146 TEX14Q8IWB6 1497 aa5.04□□□□□ -1.6
DEPDC1-203ENST00000488146 ADCY10Q96PN6 1610 aa5.04□□□□□ -1.6
DEPDC1-203ENST00000488146 CFAP43Q8NDM7 1665 aa5.03□□□□□ -1.6
DEPDC1-203ENST00000488146 MYCNP04198 464 aaPredicted RBP5.03□□□□□ -1.6
DEPDC1-203ENST00000488146 PPRC1Q5VV67 1664 aaKnown RBP5.02□□□□□ -1.61
DEPDC1-203ENST00000488146 CHMP7Q8WUX9 453 aaPredicted RBP5.02□□□□□ -1.61
DEPDC1-203ENST00000488146 ABCC2Q92887 1545 aa5.02□□□□□ -1.61
DEPDC1-203ENST00000488146 KDM6BO15054 1643 aa5.02□□□□□ -1.61
DEPDC1-203ENST00000488146 ATF5Q9Y2D1 282 aaPredicted RBP5.01□□□□□ -1.61
DEPDC1-203ENST00000488146 MAGI3Q5TCQ9 1506 aa5.01□□□□□ -1.61
DEPDC1-203ENST00000488146 KDM5BQ9UGL1 1544 aa5.01□□□□□ -1.61
DEPDC1-203ENST00000488146 TDRD9Q8NDG6 1382 aaKnown RBP5□□□□□ -1.61
DEPDC1-203ENST00000488146 AMER1Q5JTC6 1135 aaPredicted RBP5□□□□□ -1.61
DEPDC1-203ENST00000488146 CARMIL2Q6F5E8 1435 aa4.99□□□□□ -1.61
DEPDC1-203ENST00000488146 IQGAP2Q13576 1575 aa4.99□□□□□ -1.61
DEPDC1-203ENST00000488146 CFAP74Q9C0B2 1584 aa4.99□□□□□ -1.61
DEPDC1-203ENST00000488146 KIF27Q86VH2 1401 aa4.99□□□□□ -1.61
DEPDC1-203ENST00000488146 GOLGA3Q08378 1498 aa4.99□□□□□ -1.61
DEPDC1-203ENST00000488146 PRG4Q92954 1404 aaPredicted RBP4.98□□□□□ -1.61
DEPDC1-203ENST00000488146 TNIKQ9UKE5 1360 aa4.98□□□□□ -1.61
DEPDC1-203ENST00000488146 CTTNBP2Q8WZ74 1663 aa4.97□□□□□ -1.61
DEPDC1-203ENST00000488146 ARAP3Q8WWN8 1544 aa4.97□□□□□ -1.61
DEPDC1-203ENST00000488146 CYB5RLQ6IPT4 315 aa4.97□□□□□ -1.61
DEPDC1-203ENST00000488146 KIAA0556O60303 1618 aa4.96□□□□□ -1.61
DEPDC1-203ENST00000488146 ABCA8O94911 1581 aa4.96□□□□□ -1.62
DEPDC1-203ENST00000488146 POLA2Q14181 598 aa4.95□□□□□ -1.62
DEPDC1-203ENST00000488146 RBM42Q9BTD8 480 aaKnown RBP4.95□□□□□ -1.62
DEPDC1-203ENST00000488146 EPRSP07814 1512 aaKnown RBP4.95□□□□□ -1.62
DEPDC1-203ENST00000488146 ZCCHC11Q5TAX3 1644 aaKnown RBP4.94□□□□□ -1.62
DEPDC1-203ENST00000488146 ABCA9Q8IUA7 1624 aa4.94□□□□□ -1.62
DEPDC1-203ENST00000488146 UACAQ9BZF9 1416 aa4.94□□□□□ -1.62
DEPDC1-203ENST00000488146 ZMYM4Q5VZL5 1548 aa4.94□□□□□ -1.62
DEPDC1-203ENST00000488146 NEO1Q92859 1461 aa4.94□□□□□ -1.62
DEPDC1-203ENST00000488146 REREQ9P2R6 1566 aa4.93□□□□□ -1.62
DEPDC1-203ENST00000488146 IQSEC2Q5JU85 1478 aa4.93□□□□□ -1.62
DEPDC1-203ENST00000488146 DISP1Q96F81 1524 aa4.93□□□□□ -1.62
DEPDC1-203ENST00000488146 IGF1RP08069 1367 aa4.92□□□□□ -1.62
DEPDC1-203ENST00000488146 ADAMTSL3P82987 1691 aa4.92□□□□□ -1.62
DEPDC1-203ENST00000488146 WDR7Q9Y4E6 1490 aa4.92□□□□□ -1.62
DEPDC1-203ENST00000488146 SAMD9Q5K651 1589 aa4.92□□□□□ -1.62
DEPDC1-203ENST00000488146 MAGI2Q86UL8 1455 aa4.92□□□□□ -1.62
DEPDC1-203ENST00000488146 JPH4Q96JJ6 628 aa4.91□□□□□ -1.62
DEPDC1-203ENST00000488146 FAM135AQ9P2D6 1515 aa4.91□□□□□ -1.62
DEPDC1-203ENST00000488146 RAPGEF2Q9Y4G8 1499 aa4.91□□□□□ -1.62
DEPDC1-203ENST00000488146 EEA1Q15075 1411 aa4.91□□□□□ -1.62
DEPDC1-203ENST00000488146 NPM1P06748 294 aaKnown RBP eCLIP4.9□□□□□ -1.62
DEPDC1-203ENST00000488146 PTPRGP23470 1445 aa4.9□□□□□ -1.62
DEPDC1-203ENST00000488146 ASXL2Q76L83 1435 aa4.9□□□□□ -1.63
DEPDC1-203ENST00000488146 EFCAB5A4FU69 1503 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms