RNA–Protein interactions for RNA: ENST00000487673.5

PTK7-215, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 5,282 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-215ENST00000487673 RTL5Q5HYW3 569 aaPredicted RBP19.54■□□□□ 0.72
PTK7-215ENST00000487673 KDM2AQ9Y2K7 1162 aa19.5■□□□□ 0.71
PTK7-215ENST00000487673 TOP2AP11388 1531 aaKnown RBP19.5■□□□□ 0.71
PTK7-215ENST00000487673 DDX10Q13206 875 aaKnown RBP19.49■□□□□ 0.71
PTK7-215ENST00000487673 CADPSQ9ULU8 1353 aa19.48■□□□□ 0.71
PTK7-215ENST00000487673 SOGA1O94964 1423 aa19.47■□□□□ 0.71
PTK7-215ENST00000487673 BCL11AQ9H165 835 aa19.43■□□□□ 0.7
PTK7-215ENST00000487673 ATAD2BQ9ULI0 1458 aa19.43■□□□□ 0.7
PTK7-215ENST00000487673 EIF4G1Q04637 1599 aaKnown RBP19.43■□□□□ 0.7
PTK7-215ENST00000487673 CCNB3Q8WWL7 1395 aa19.41■□□□□ 0.7
PTK7-215ENST00000487673 PPP1R15AO75807 674 aaPredicted RBP19.4■□□□□ 0.7
PTK7-215ENST00000487673 EIF4G2P78344 907 aaKnown RBP eCLIP19.39■□□□□ 0.7
PTK7-215ENST00000487673 CARMIL2Q6F5E8 1435 aa19.39■□□□□ 0.69
PTK7-215ENST00000487673 WIZO95785 1651 aa19.37■□□□□ 0.69
PTK7-215ENST00000487673 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
PTK7-215ENST00000487673 ARID4BQ4LE39 1312 aaPredicted RBP19.36■□□□□ 0.69
PTK7-215ENST00000487673 TMC1Q8TDI8 760 aa19.35■□□□□ 0.69
PTK7-215ENST00000487673 FAM9BQ8IZU0 186 aa19.35■□□□□ 0.69
PTK7-215ENST00000487673 ABCC8Q09428 1581 aa19.35■□□□□ 0.69
PTK7-215ENST00000487673 SMARCA4P51532 1647 aa19.33■□□□□ 0.69
PTK7-215ENST00000487673 HNRNPUQ00839 825 aaKnown RBP eCLIP19.32■□□□□ 0.68
PTK7-215ENST00000487673 HIRIP3Q9BW71 556 aaPredicted RBP19.32■□□□□ 0.68
PTK7-215ENST00000487673 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
PTK7-215ENST00000487673 RGL3Q3MIN7 710 aa19.3■□□□□ 0.68
PTK7-215ENST00000487673 SALL2Q9Y467 1007 aaPredicted RBP19.29■□□□□ 0.68
PTK7-215ENST00000487673 WDR43Q15061 677 aaKnown RBP eCLIP19.28■□□□□ 0.68
PTK7-215ENST00000487673 VPS8Q8N3P4 1428 aa19.26■□□□□ 0.67
PTK7-215ENST00000487673 CDCA8Q53HL2 280 aa19.26■□□□□ 0.67
PTK7-215ENST00000487673 FMN1Q68DA7 1419 aa19.25■□□□□ 0.67
PTK7-215ENST00000487673 MRS2Q9HD23 443 aa19.23■□□□□ 0.67
PTK7-215ENST00000487673 KANK1Q14678 1352 aa19.19■□□□□ 0.66
PTK7-215ENST00000487673 RAPGEF2Q9Y4G8 1499 aa19.18■□□□□ 0.66
PTK7-215ENST00000487673 C14orf37Q86TY3 774 aa19.18■□□□□ 0.66
PTK7-215ENST00000487673 FANCD2Q9BXW9 1451 aa19.17■□□□□ 0.66
PTK7-215ENST00000487673 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.16■□□□□ 0.66
PTK7-215ENST00000487673 ARHGAP35Q9NRY4 1499 aa19.16■□□□□ 0.66
PTK7-215ENST00000487673 FKBP8Q14318 412 aa19.16■□□□□ 0.66
PTK7-215ENST00000487673 CARD11Q9BXL7 1154 aa19.16■□□□□ 0.66
PTK7-215ENST00000487673 TRHP20396 242 aaPredicted RBP19.15■□□□□ 0.66
PTK7-215ENST00000487673 EFCAB2Q5VUJ9 269 aa19.13■□□□□ 0.65
PTK7-215ENST00000487673 SCAF1Q9H7N4 1312 aaKnown RBP19.12■□□□□ 0.65
PTK7-215ENST00000487673 MIER1Q8N108 512 aa19.1■□□□□ 0.65
PTK7-215ENST00000487673 TIMELESSQ9UNS1 1208 aa19.1■□□□□ 0.65
PTK7-215ENST00000487673 HDGFP51858 240 aaKnown RBP19.09■□□□□ 0.65
PTK7-215ENST00000487673 KNSTRNQ9Y448 316 aa19.08■□□□□ 0.64
PTK7-215ENST00000487673 JPH4Q96JJ6 628 aa19.08■□□□□ 0.64
PTK7-215ENST00000487673 CFAP53Q96M91 514 aa19.08■□□□□ 0.64
PTK7-215ENST00000487673 SIN3AQ96ST3 1273 aa19.07■□□□□ 0.64
PTK7-215ENST00000487673 NCAPD3P42695 1498 aa19.07■□□□□ 0.64
PTK7-215ENST00000487673 PLEKHG5O94827 1062 aa19.06■□□□□ 0.64
PTK7-215ENST00000487673 POGKQ9P215 609 aa19.06■□□□□ 0.64
PTK7-215ENST00000487673 SETD5Q9C0A6 1442 aa19.04■□□□□ 0.64
PTK7-215ENST00000487673 KANK4Q5T7N3 995 aaPredicted RBP19.04■□□□□ 0.64
PTK7-215ENST00000487673 ANP32AP39687 249 aaKnown RBP19.02■□□□□ 0.64
PTK7-215ENST00000487673 NPM2Q86SE8 214 aaKnown RBP19.02■□□□□ 0.64
PTK7-215ENST00000487673 RSPH4AQ5TD94 716 aa19■□□□□ 0.63
PTK7-215ENST00000487673 ZBTB7CA1YPR0 619 aa19■□□□□ 0.63
PTK7-215ENST00000487673 MLECQ14165 292 aa18.99■□□□□ 0.63
PTK7-215ENST00000487673 FHOD3Q2V2M9 1422 aa18.98■□□□□ 0.63
PTK7-215ENST00000487673 GGT6Q6P531 493 aa18.98■□□□□ 0.63
PTK7-215ENST00000487673 ANKRD30AQ9BXX3 1397 aa18.98■□□□□ 0.63
PTK7-215ENST00000487673 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
PTK7-215ENST00000487673 UPF2Q9HAU5 1272 aaKnown RBP18.97■□□□□ 0.63
PTK7-215ENST00000487673 HAP1P54257 671 aaPredicted RBP18.96■□□□□ 0.63
PTK7-215ENST00000487673 CCDC18Q5T9S5 1454 aa18.95■□□□□ 0.62
PTK7-215ENST00000487673 PKD2Q13563 968 aa18.95■□□□□ 0.62
PTK7-215ENST00000487673 CCDC136Q96JN2 1154 aa18.95■□□□□ 0.62
PTK7-215ENST00000487673 TMF1P82094 1093 aa18.93■□□□□ 0.62
PTK7-215ENST00000487673 NUDCQ9Y266 331 aa18.91■□□□□ 0.62
PTK7-215ENST00000487673 A0A0G2JS52 829 aa18.91■□□□□ 0.62
PTK7-215ENST00000487673 FGD5Q6ZNL6 1462 aa18.9■□□□□ 0.62
PTK7-215ENST00000487673 GAPVD1Q14C86 1478 aa18.89■□□□□ 0.61
PTK7-215ENST00000487673 NUP155O75694 1391 aa18.89■□□□□ 0.61
PTK7-215ENST00000487673 PTPRGP23470 1445 aa18.89■□□□□ 0.61
PTK7-215ENST00000487673 MYH16Q9H6N6 1097 aa18.88■□□□□ 0.61
PTK7-215ENST00000487673 SENP3-EIF4A1A0A087X0R7 540 aa18.88■□□□□ 0.61
PTK7-215ENST00000487673 IRX6P78412 446 aaPredicted RBP18.88■□□□□ 0.61
PTK7-215ENST00000487673 PPM1GO15355 546 aaPredicted RBP18.87■□□□□ 0.61
PTK7-215ENST00000487673 OSCARQ8IYS5 282 aa18.87■□□□□ 0.61
PTK7-215ENST00000487673 SPAG9O60271 1321 aaKnown RBP18.87■□□□□ 0.61
PTK7-215ENST00000487673 MPHOSPH9Q99550 1183 aa18.85■□□□□ 0.61
PTK7-215ENST00000487673 IGF1RP08069 1367 aa18.84■□□□□ 0.61
PTK7-215ENST00000487673 MAPK8IP3Q9UPT6 1336 aa18.83■□□□□ 0.61
PTK7-215ENST00000487673 KIF3BO15066 747 aa18.83■□□□□ 0.61
PTK7-215ENST00000487673 HNRNPMP52272 730 aaKnown RBP eCLIP18.83■□□□□ 0.611e-6■■□□□ 14.4
PTK7-215ENST00000487673 RAB3GAP2Q9H2M9 1393 aa18.83■□□□□ 0.6
PTK7-215ENST00000487673 HSP90AA1P07900 732 aaKnown RBP18.83■□□□□ 0.6
PTK7-215ENST00000487673 LMOD2Q6P5Q4 547 aa18.82■□□□□ 0.6
PTK7-215ENST00000487673 RUSC2Q8N2Y8 1516 aa18.82■□□□□ 0.6
PTK7-215ENST00000487673 FOXD1Q16676 465 aa18.79■□□□□ 0.6
PTK7-215ENST00000487673 SRPK2P78362 688 aaKnown RBP18.79■□□□□ 0.6
PTK7-215ENST00000487673 PNNQ9H307 717 aaKnown RBP18.79■□□□□ 0.6
PTK7-215ENST00000487673 RAD54L2Q9Y4B4 1467 aa18.78■□□□□ 0.6
PTK7-215ENST00000487673 TNNT2P45379 298 aaPredicted RBP18.76■□□□□ 0.59
PTK7-215ENST00000487673 NEUROD2Q15784 382 aa18.75■□□□□ 0.59
PTK7-215ENST00000487673 CC2D1BQ5T0F9 858 aaKnown RBP18.74■□□□□ 0.59
PTK7-215ENST00000487673 CFTRP13569 1480 aa18.73■□□□□ 0.59
PTK7-215ENST00000487673 WASHC2CQ9Y4E1 1318 aa18.73■□□□□ 0.59
PTK7-215ENST00000487673 HSPA5P11021 654 aaKnown RBP18.72■□□□□ 0.59
PTK7-215ENST00000487673 CYB5RLQ6IPT4 315 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms