RNA–Protein interactions for RNA: ENST00000487673.5

PTK7-215, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 5,282 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-215ENST00000487673 NISCHQ9Y2I1 1504 aa25.57■■□□□ 1.68
PTK7-215ENST00000487673 DCAF8L2P0C7V8 631 aa25.53■■□□□ 1.68
PTK7-215ENST00000487673 SUPT5HO00267 1087 aaKnown RBP24■■□□□ 1.43
PTK7-215ENST00000487673 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
PTK7-215ENST00000487673 EHMT2Q96KQ7 1210 aa23.07■■□□□ 1.28
PTK7-215ENST00000487673 APLP2Q06481 763 aa22.67■■□□□ 1.22
PTK7-215ENST00000487673 FAM9AQ8IZU1 332 aaPredicted RBP22.6■■□□□ 1.21
PTK7-215ENST00000487673 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
PTK7-215ENST00000487673 TTBK1Q5TCY1 1321 aaPredicted RBP22.21■■□□□ 1.15
PTK7-215ENST00000487673 RANGAP1P46060 587 aaPredicted RBP22.17■■□□□ 1.14
PTK7-215ENST00000487673 UBTFP17480 764 aaKnown RBP22.03■■□□□ 1.12
PTK7-215ENST00000487673 ABCC9O60706 1549 aa22.02■■□□□ 1.12
PTK7-215ENST00000487673 PCGF6Q9BYE7 350 aa21.97■■□□□ 1.11
PTK7-215ENST00000487673 ATP1B4Q9UN42 357 aaPredicted RBP21.93■■□□□ 1.1
PTK7-215ENST00000487673 PELP1Q8IZL8 1130 aaKnown RBP21.87■■□□□ 1.09
PTK7-215ENST00000487673 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.068e-8■■□□□ 13.3
PTK7-215ENST00000487673 ZEB1P37275 1124 aaPredicted RBP21.63■■□□□ 1.05
PTK7-215ENST00000487673 CCER1Q8TC90 406 aaPredicted RBP21.58■■□□□ 1.05
PTK7-215ENST00000487673 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
PTK7-215ENST00000487673 PPARGC1BQ86YN6 1023 aaKnown RBP21.49■■□□□ 1.03
PTK7-215ENST00000487673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
PTK7-215ENST00000487673 HNRNPUL2Q1KMD3 747 aaKnown RBP21.35■■□□□ 1.01
PTK7-215ENST00000487673 LOC105371045A0A1W2PR82 267 aa21.31■■□□□ 1
PTK7-215ENST00000487673 MYT1Q01538 1121 aa21.25■□□□□ 0.99
PTK7-215ENST00000487673 TRIM26Q12899 539 aaPredicted RBP21.24■□□□□ 0.99
PTK7-215ENST00000487673 CCDC180Q9P1Z9 1646 aa21.23■□□□□ 0.99
PTK7-215ENST00000487673 ZCCHC6Q5VYS8 1495 aaKnown RBP21.16■□□□□ 0.98
PTK7-215ENST00000487673 MYT1LQ9UL68 1186 aa21.16■□□□□ 0.98
PTK7-215ENST00000487673 ITGAEP38570 1179 aa21.15■□□□□ 0.98
PTK7-215ENST00000487673 CENPBP07199 599 aaPredicted RBP21.11■□□□□ 0.97
PTK7-215ENST00000487673 SCRIBQ14160 1630 aa21.05■□□□□ 0.96
PTK7-215ENST00000487673 YTHDC1Q96MU7 727 aaKnown RBP20.85■□□□□ 0.93
PTK7-215ENST00000487673 FBLN2P98095 1184 aa20.82■□□□□ 0.92
PTK7-215ENST00000487673 RB1CC1Q8TDY2 1594 aa20.81■□□□□ 0.92
PTK7-215ENST00000487673 ERICH6Q7L0X2 663 aa20.79■□□□□ 0.92
PTK7-215ENST00000487673 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
PTK7-215ENST00000487673 FAM50AQ14320 339 aaKnown RBP20.74■□□□□ 0.91
PTK7-215ENST00000487673 NEFLP07196 543 aa20.74■□□□□ 0.91
PTK7-215ENST00000487673 POLR3GLQ9BT43 218 aa20.73■□□□□ 0.91
PTK7-215ENST00000487673 HRCP23327 699 aa20.69■□□□□ 0.9
PTK7-215ENST00000487673 NACADO15069 1562 aa20.66■□□□□ 0.9
PTK7-215ENST00000487673 TRIM52Q96A61 297 aa20.58■□□□□ 0.88
PTK7-215ENST00000487673 CNGB1Q14028 1251 aaPredicted RBP20.53■□□□□ 0.88
PTK7-215ENST00000487673 P3H3Q8IVL6 736 aa20.49■□□□□ 0.87
PTK7-215ENST00000487673 CDK11AQ9UQ88 783 aaPredicted RBP20.48■□□□□ 0.87
PTK7-215ENST00000487673 ARID3CA6NKF2 412 aa20.4■□□□□ 0.86
PTK7-215ENST00000487673 SLC4A1APQ9BWU0 796 aaKnown RBP20.37■□□□□ 0.85
PTK7-215ENST00000487673 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
PTK7-215ENST00000487673 NEUROD1Q13562 356 aa20.36■□□□□ 0.85
PTK7-215ENST00000487673 RSF1Q96T23 1441 aaPredicted RBP20.32■□□□□ 0.84
PTK7-215ENST00000487673 NPM1P06748 294 aaKnown RBP eCLIP20.26■□□□□ 0.83
PTK7-215ENST00000487673 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
PTK7-215ENST00000487673 ZNF777Q9ULD5 760 aaPredicted RBP20.24■□□□□ 0.83
PTK7-215ENST00000487673 ZNF326Q5BKZ1 582 aaKnown RBP20.21■□□□□ 0.83
PTK7-215ENST00000487673 DIEXFQ68CQ4 756 aaKnown RBP20.21■□□□□ 0.83
PTK7-215ENST00000487673 CHMP7Q8WUX9 453 aaPredicted RBP20.18■□□□□ 0.82
PTK7-215ENST00000487673 BAZ1AQ9NRL2 1556 aaPredicted RBP20.15■□□□□ 0.82
PTK7-215ENST00000487673 EEA1Q15075 1411 aa20.12■□□□□ 0.81
PTK7-215ENST00000487673 WRNQ14191 1432 aaPredicted RBP eCLIP20.06■□□□□ 0.8
PTK7-215ENST00000487673 ESF1Q9H501 851 aaKnown RBP20.06■□□□□ 0.8
PTK7-215ENST00000487673 ANP32CO43423 234 aa20.01■□□□□ 0.79
PTK7-215ENST00000487673 BCANQ96GW7 911 aa20■□□□□ 0.79
PTK7-215ENST00000487673 CLIP1P30622 1438 aa19.98■□□□□ 0.79
PTK7-215ENST00000487673 MTUS2Q5JR59 1369 aa19.97■□□□□ 0.79
PTK7-215ENST00000487673 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
PTK7-215ENST00000487673 DAXXQ9UER7 740 aaPredicted RBP19.96■□□□□ 0.79
PTK7-215ENST00000487673 CECR2Q9BXF3 1484 aa19.96■□□□□ 0.79
PTK7-215ENST00000487673 ZNF316A6NFI3 1004 aaPredicted RBP19.93■□□□□ 0.78
PTK7-215ENST00000487673 TSPY4P0CV99 314 aa19.93■□□□□ 0.78
PTK7-215ENST00000487673 TSPY10P0CW01 314 aa19.93■□□□□ 0.78
PTK7-215ENST00000487673 GOLGA3Q08378 1498 aa19.93■□□□□ 0.78
PTK7-215ENST00000487673 ERCC6Q03468 1493 aa19.9■□□□□ 0.78
PTK7-215ENST00000487673 MYO15BQ96JP2 1530 aa19.88■□□□□ 0.77
PTK7-215ENST00000487673 TONSLQ96HA7 1378 aa19.86■□□□□ 0.77
PTK7-215ENST00000487673 STAG3Q9UJ98 1225 aa19.86■□□□□ 0.77
PTK7-215ENST00000487673 PLEKHD1A6NEE1 506 aa19.83■□□□□ 0.76
PTK7-215ENST00000487673 CHGAP10645 457 aaKnown RBP19.82■□□□□ 0.76
PTK7-215ENST00000487673 CHIC2Q9UKJ5 165 aa19.82■□□□□ 0.76
PTK7-215ENST00000487673 NEFMP07197 916 aa19.8■□□□□ 0.76
PTK7-215ENST00000487673 CEP164Q9UPV0 1460 aa19.8■□□□□ 0.76
PTK7-215ENST00000487673 SMARCA2P51531 1590 aa19.78■□□□□ 0.76
PTK7-215ENST00000487673 CLSPNQ9HAW4 1339 aa19.77■□□□□ 0.75
PTK7-215ENST00000487673 CEP162Q5TB80 1403 aa19.76■□□□□ 0.75
PTK7-215ENST00000487673 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.75■□□□□ 0.755e-6■■■□□ 17.6
PTK7-215ENST00000487673 TNIKQ9UKE5 1360 aa19.75■□□□□ 0.75
PTK7-215ENST00000487673 ACIN1Q9UKV3 1341 aaKnown RBP19.73■□□□□ 0.75
PTK7-215ENST00000487673 MROH2BQ7Z745 1585 aa19.71■□□□□ 0.75
PTK7-215ENST00000487673 KCNH8Q96L42 1107 aa19.7■□□□□ 0.74
PTK7-215ENST00000487673 PLPPR3Q6T4P5 718 aa19.68■□□□□ 0.74
PTK7-215ENST00000487673 PDS5BQ9NTI5 1447 aa19.67■□□□□ 0.74
PTK7-215ENST00000487673 CCDC88BA6NC98 1476 aa19.63■□□□□ 0.73
PTK7-215ENST00000487673 CUX2O14529 1486 aa19.63■□□□□ 0.73
PTK7-215ENST00000487673 CARMIL1Q5VZK9 1371 aa19.62■□□□□ 0.73
PTK7-215ENST00000487673 ZBTB47Q9UFB7 747 aaPredicted RBP19.61■□□□□ 0.73
PTK7-215ENST00000487673 CFDP1Q9UEE9 299 aaPredicted RBP19.6■□□□□ 0.73
PTK7-215ENST00000487673 SLC24A1O60721 1099 aa19.6■□□□□ 0.73
PTK7-215ENST00000487673 RRP7BPQ9NSQ0 103 aa19.57■□□□□ 0.72
PTK7-215ENST00000487673 CANXP27824 592 aaKnown RBP19.56■□□□□ 0.72
PTK7-215ENST00000487673 FHAD1B1AJZ9 1412 aa19.55■□□□□ 0.72
PTK7-215ENST00000487673 GTF3C3Q9Y5Q9 886 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms