RNA–Protein interactions for RNA: ENST00000486690.6

LDHA-210, Transcript of lactate dehydrogenase A, humanhuman

TSL 5

Gene LDHA, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-210ENST00000486690 FGD5Q6ZNL6 1462 aa13.39□□□□□ -0.27
LDHA-210ENST00000486690 ZBTB22O15209 634 aa13.37□□□□□ -0.27
LDHA-210ENST00000486690 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
LDHA-210ENST00000486690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.34□□□□□ -0.27
LDHA-210ENST00000486690 HNRNPUL2Q1KMD3 747 aaKnown RBP13.34□□□□□ -0.27
LDHA-210ENST00000486690 CYB5RLQ6IPT4 315 aa13.32□□□□□ -0.28
LDHA-210ENST00000486690 SNAPC4Q5SXM2 1469 aa13.31□□□□□ -0.28
LDHA-210ENST00000486690 ARAP1Q96P48 1450 aa13.31□□□□□ -0.28
LDHA-210ENST00000486690 CLASP1Q7Z460 1538 aa13.31□□□□□ -0.28
LDHA-210ENST00000486690 FBLN2P98095 1184 aa13.31□□□□□ -0.28
LDHA-210ENST00000486690 MAGI1Q96QZ7 1491 aaPredicted RBP13.3□□□□□ -0.28
LDHA-210ENST00000486690 GRIN2BQ13224 1484 aa13.29□□□□□ -0.28
LDHA-210ENST00000486690 SYNJ2O15056 1496 aa13.27□□□□□ -0.29
LDHA-210ENST00000486690 ABCA10Q8WWZ4 1543 aa13.27□□□□□ -0.29
LDHA-210ENST00000486690 SAMD1Q6SPF0 538 aaPredicted RBP13.26□□□□□ -0.29
LDHA-210ENST00000486690 PBRM1Q86U86 1689 aa13.26□□□□□ -0.29
LDHA-210ENST00000486690 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
LDHA-210ENST00000486690 ABCA5Q8WWZ7 1642 aa13.25□□□□□ -0.29
LDHA-210ENST00000486690 GAPVD1Q14C86 1478 aa13.25□□□□□ -0.29
LDHA-210ENST00000486690 CHMP7Q8WUX9 453 aaPredicted RBP13.25□□□□□ -0.29
LDHA-210ENST00000486690 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
LDHA-210ENST00000486690 SUPT5HO00267 1087 aaKnown RBP13.24□□□□□ -0.29
LDHA-210ENST00000486690 APLP2Q06481 763 aa13.23□□□□□ -0.29
LDHA-210ENST00000486690 BIVM-ERCC5R4GMW8 1640 aa13.21□□□□□ -0.3
LDHA-210ENST00000486690 TOP2BQ02880 1626 aa13.19□□□□□ -0.3
LDHA-210ENST00000486690 WRNQ14191 1432 aaPredicted RBP eCLIP13.17□□□□□ -0.3
LDHA-210ENST00000486690 GRIN2AQ12879 1464 aa13.14□□□□□ -0.31
LDHA-210ENST00000486690 ADAMTS12P58397 1594 aa13.12□□□□□ -0.31
LDHA-210ENST00000486690 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
LDHA-210ENST00000486690 NUP160Q12769 1436 aa13.12□□□□□ -0.31
LDHA-210ENST00000486690 CEP170Q5SW79 1584 aa13.11□□□□□ -0.31
LDHA-210ENST00000486690 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
LDHA-210ENST00000486690 ERICH3Q5RHP9 1530 aa13.09□□□□□ -0.31
LDHA-210ENST00000486690 ERCC6L2Q5T890 1561 aa13.09□□□□□ -0.31
LDHA-210ENST00000486690 SHROOM2Q13796 1616 aa13.09□□□□□ -0.31
LDHA-210ENST00000486690 FHAD1B1AJZ9 1412 aa13.08□□□□□ -0.32
LDHA-210ENST00000486690 CAPN15O75808 1086 aa13.08□□□□□ -0.32
LDHA-210ENST00000486690 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
LDHA-210ENST00000486690 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
LDHA-210ENST00000486690 JPH4Q96JJ6 628 aa12.96□□□□□ -0.33
LDHA-210ENST00000486690 ATF5Q9Y2D1 282 aaPredicted RBP12.95□□□□□ -0.34
LDHA-210ENST00000486690 PRG4Q92954 1404 aaPredicted RBP12.95□□□□□ -0.34
LDHA-210ENST00000486690 IGF1RP08069 1367 aa12.94□□□□□ -0.34
LDHA-210ENST00000486690 RUSC2Q8N2Y8 1516 aa12.94□□□□□ -0.34
LDHA-210ENST00000486690 KIF13AQ9H1H9 1805 aa12.92□□□□□ -0.34
LDHA-210ENST00000486690 DSG3P32926 999 aa12.9□□□□□ -0.34
LDHA-210ENST00000486690 KIAA0586Q9BVV6 1533 aa12.89□□□□□ -0.35
LDHA-210ENST00000486690 KIF27Q86VH2 1401 aa12.88□□□□□ -0.35
LDHA-210ENST00000486690 CUL7Q14999 1698 aa12.88□□□□□ -0.35
LDHA-210ENST00000486690 MAPKBP1O60336 1514 aa12.83□□□□□ -0.35
LDHA-210ENST00000486690 ADCY10Q96PN6 1610 aa12.83□□□□□ -0.36
LDHA-210ENST00000486690 ABCC10Q5T3U5 1492 aa12.82□□□□□ -0.36
LDHA-210ENST00000486690 CARMIL1Q5VZK9 1371 aa12.81□□□□□ -0.36
LDHA-210ENST00000486690 ABCB7O75027 752 aa12.79□□□□□ -0.36
LDHA-210ENST00000486690 DIP2BQ9P265 1576 aa12.78□□□□□ -0.36
LDHA-210ENST00000486690 NPM1P06748 294 aaKnown RBP eCLIP12.76□□□□□ -0.37
LDHA-210ENST00000486690 FAM69CQ0P6D2 419 aa12.76□□□□□ -0.37
LDHA-210ENST00000486690 POLA2Q14181 598 aa12.76□□□□□ -0.37
LDHA-210ENST00000486690 PTPRGP23470 1445 aa12.74□□□□□ -0.37
LDHA-210ENST00000486690 IQGAP2Q13576 1575 aa12.73□□□□□ -0.37
LDHA-210ENST00000486690 TNIKQ9UKE5 1360 aa12.72□□□□□ -0.37
LDHA-210ENST00000486690 DISP1Q96F81 1524 aa12.72□□□□□ -0.37
LDHA-210ENST00000486690 CARMIL2Q6F5E8 1435 aa12.71□□□□□ -0.38
LDHA-210ENST00000486690 ABCC2Q92887 1545 aa12.7□□□□□ -0.38
LDHA-210ENST00000486690 UHRF1BP1LA0JNW5 1464 aa12.7□□□□□ -0.38
LDHA-210ENST00000486690 RAPGEF2Q9Y4G8 1499 aa12.69□□□□□ -0.38
LDHA-210ENST00000486690 UGGT2Q9NYU1 1516 aa12.68□□□□□ -0.38
LDHA-210ENST00000486690 TSPOAP1O95153 1857 aa12.68□□□□□ -0.38
LDHA-210ENST00000486690 GLI2P10070 1586 aa12.66□□□□□ -0.38
LDHA-210ENST00000486690 ILDR1Q86SU0 546 aaPredicted RBP12.66□□□□□ -0.38
LDHA-210ENST00000486690 UACAQ9BZF9 1416 aa12.65□□□□□ -0.38
LDHA-210ENST00000486690 PPRC1Q5VV67 1664 aaKnown RBP12.65□□□□□ -0.38
LDHA-210ENST00000486690 KDM5BQ9UGL1 1544 aa12.65□□□□□ -0.38
LDHA-210ENST00000486690 KDM6BO15054 1643 aa12.65□□□□□ -0.38
LDHA-210ENST00000486690 ASXL2Q76L83 1435 aa12.64□□□□□ -0.39
LDHA-210ENST00000486690 PLB1Q6P1J6 1458 aa12.64□□□□□ -0.39
LDHA-210ENST00000486690 KIAA0556O60303 1618 aa12.62□□□□□ -0.39
LDHA-210ENST00000486690 CTTNBP2Q8WZ74 1663 aa12.61□□□□□ -0.39
LDHA-210ENST00000486690 TTBK1Q5TCY1 1321 aaPredicted RBP12.61□□□□□ -0.39
LDHA-210ENST00000486690 PRXQ9BXM0 1461 aa12.59□□□□□ -0.39
LDHA-210ENST00000486690 ZCCHC11Q5TAX3 1644 aaKnown RBP12.59□□□□□ -0.39
LDHA-210ENST00000486690 ZBTB12Q9Y330 459 aaPredicted RBP12.59□□□□□ -0.39
LDHA-210ENST00000486690 MAP3K4Q9Y6R4 1608 aa12.59□□□□□ -0.39
LDHA-210ENST00000486690 EPRSP07814 1512 aaKnown RBP12.58□□□□□ -0.4
LDHA-210ENST00000486690 KDM4FA0A1W2PPD8 638 aa12.58□□□□□ -0.4
LDHA-210ENST00000486690 COL17A1Q9UMD9 1497 aaPredicted RBP12.56□□□□□ -0.4
LDHA-210ENST00000486690 ABCA8O94911 1581 aa12.55□□□□□ -0.4
LDHA-210ENST00000486690 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
LDHA-210ENST00000486690 WDR7Q9Y4E6 1490 aa12.51□□□□□ -0.41
LDHA-210ENST00000486690 TEX14Q8IWB6 1497 aa12.49□□□□□ -0.41
LDHA-210ENST00000486690 CFAP43Q8NDM7 1665 aa12.48□□□□□ -0.41
LDHA-210ENST00000486690 MAGI3Q5TCQ9 1506 aa12.47□□□□□ -0.41
LDHA-210ENST00000486690 SAMD9Q5K651 1589 aa12.45□□□□□ -0.42
LDHA-210ENST00000486690 ATP10BO94823 1461 aa12.44□□□□□ -0.42
LDHA-210ENST00000486690 CD109Q6YHK3 1445 aa12.44□□□□□ -0.42
LDHA-210ENST00000486690 ADGRL1O94910 1474 aa12.42□□□□□ -0.42
LDHA-210ENST00000486690 KCNH8Q96L42 1107 aa12.41□□□□□ -0.42
LDHA-210ENST00000486690 MKRN4PQ13434 485 aaPredicted RBP12.39□□□□□ -0.43
LDHA-210ENST00000486690 P3H3Q8IVL6 736 aa12.39□□□□□ -0.43
LDHA-210ENST00000486690 ABCA9Q8IUA7 1624 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms