RNA–Protein interactions for RNA: ENST00000486554.1

TSC22D3-208, Transcript of TSC22 domain family member 3, humanhuman

TSL 2

Gene TSC22D3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-208ENST00000486554 NPM1P06748 294 aaKnown RBP eCLIP25.7■■□□□ 1.7
TSC22D3-208ENST00000486554 ABCA5Q8WWZ7 1642 aa25.7■■□□□ 1.7
TSC22D3-208ENST00000486554 PRG4Q92954 1404 aaPredicted RBP25.63■■□□□ 1.69
TSC22D3-208ENST00000486554 ADAMTS12P58397 1594 aa25.62■■□□□ 1.69
TSC22D3-208ENST00000486554 ABCA10Q8WWZ4 1543 aa25.6■■□□□ 1.69
TSC22D3-208ENST00000486554 ADCY10Q96PN6 1610 aa25.52■■□□□ 1.68
TSC22D3-208ENST00000486554 LMTK3Q96Q04 1460 aa25.51■■□□□ 1.67
TSC22D3-208ENST00000486554 FHAD1B1AJZ9 1412 aa25.47■■□□□ 1.67
TSC22D3-208ENST00000486554 JPH4Q96JJ6 628 aa25.47■■□□□ 1.67
TSC22D3-208ENST00000486554 PPRC1Q5VV67 1664 aaKnown RBP25.32■■□□□ 1.64
TSC22D3-208ENST00000486554 RUSC2Q8N2Y8 1516 aa25.29■■□□□ 1.64
TSC22D3-208ENST00000486554 WRNQ14191 1432 aaPredicted RBP eCLIP25.26■■□□□ 1.63
TSC22D3-208ENST00000486554 COL17A1Q9UMD9 1497 aaPredicted RBP25.26■■□□□ 1.63
TSC22D3-208ENST00000486554 ERICH3Q5RHP9 1530 aa25.26■■□□□ 1.63
TSC22D3-208ENST00000486554 SOCS7O14512 581 aa25.25■■□□□ 1.63
TSC22D3-208ENST00000486554 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
TSC22D3-208ENST00000486554 GLI2P10070 1586 aa25.19■■□□□ 1.62
TSC22D3-208ENST00000486554 ILDR2Q71H61 639 aa25.19■■□□□ 1.62
TSC22D3-208ENST00000486554 ASXL2Q76L83 1435 aa25.15■■□□□ 1.62
TSC22D3-208ENST00000486554 PLB1Q6P1J6 1458 aa25.13■■□□□ 1.61
TSC22D3-208ENST00000486554 DISP3Q9P2K9 1392 aa25.11■■□□□ 1.61
TSC22D3-208ENST00000486554 ABCC2Q92887 1545 aa25.08■■□□□ 1.61
TSC22D3-208ENST00000486554 TTBK1Q5TCY1 1321 aaPredicted RBP25.08■■□□□ 1.6
TSC22D3-208ENST00000486554 TEX14Q8IWB6 1497 aa25.08■■□□□ 1.6
TSC22D3-208ENST00000486554 PTPRGP23470 1445 aa25.04■■□□□ 1.6
TSC22D3-208ENST00000486554 MAP3K4Q9Y6R4 1608 aa25.04■■□□□ 1.6
TSC22D3-208ENST00000486554 CUL7Q14999 1698 aa25.01■■□□□ 1.59
TSC22D3-208ENST00000486554 KIAA0586Q9BVV6 1533 aa24.99■■□□□ 1.59
TSC22D3-208ENST00000486554 EPRSP07814 1512 aaKnown RBP24.98■■□□□ 1.59
TSC22D3-208ENST00000486554 BIVM-ERCC5R4GMW8 1640 aa24.97■■□□□ 1.59
TSC22D3-208ENST00000486554 KIF21BO75037 1637 aa24.93■■□□□ 1.58
TSC22D3-208ENST00000486554 TNIKQ9UKE5 1360 aa24.88■■□□□ 1.57
TSC22D3-208ENST00000486554 PTPRMP28827 1452 aa24.87■■□□□ 1.57
TSC22D3-208ENST00000486554 PCF11O94913 1555 aaKnown RBP24.86■■□□□ 1.57
TSC22D3-208ENST00000486554 UHRF1BP1LA0JNW5 1464 aa24.85■■□□□ 1.57
TSC22D3-208ENST00000486554 CERKQ8TCT0 537 aa24.83■■□□□ 1.57
TSC22D3-208ENST00000486554 CARMIL2Q6F5E8 1435 aa24.81■■□□□ 1.56
TSC22D3-208ENST00000486554 UACAQ9BZF9 1416 aa24.8■■□□□ 1.56
TSC22D3-208ENST00000486554 SPATA31D1Q6ZQQ2 1576 aa24.79■■□□□ 1.56
TSC22D3-208ENST00000486554 KDM5BQ9UGL1 1544 aa24.76■■□□□ 1.55
TSC22D3-208ENST00000486554 ADAMTSL3P82987 1691 aa24.75■■□□□ 1.55
TSC22D3-208ENST00000486554 ZCCHC11Q5TAX3 1644 aaKnown RBP24.75■■□□□ 1.55
TSC22D3-208ENST00000486554 MAGI3Q5TCQ9 1506 aa24.68■■□□□ 1.54
TSC22D3-208ENST00000486554 WDR7Q9Y4E6 1490 aa24.68■■□□□ 1.54
TSC22D3-208ENST00000486554 CD109Q6YHK3 1445 aa24.68■■□□□ 1.54
TSC22D3-208ENST00000486554 HSPA2P54652 639 aa24.67■■□□□ 1.54
TSC22D3-208ENST00000486554 CFAP43Q8NDM7 1665 aa24.63■■□□□ 1.53
TSC22D3-208ENST00000486554 MADDQ8WXG6 1647 aa24.62■■□□□ 1.53
TSC22D3-208ENST00000486554 IGF1RP08069 1367 aa24.6■■□□□ 1.53
TSC22D3-208ENST00000486554 IQGAP2Q13576 1575 aa24.59■■□□□ 1.53
TSC22D3-208ENST00000486554 BCORL1Q5H9F3 1711 aa24.57■■□□□ 1.52
TSC22D3-208ENST00000486554 DISP1Q96F81 1524 aa24.56■■□□□ 1.52
TSC22D3-208ENST00000486554 KCNH8Q96L42 1107 aa24.55■■□□□ 1.52
TSC22D3-208ENST00000486554 ARID4BQ4LE39 1312 aaPredicted RBP24.54■■□□□ 1.52
TSC22D3-208ENST00000486554 ARAP3Q8WWN8 1544 aa24.52■■□□□ 1.52
TSC22D3-208ENST00000486554 RIMS1Q86UR5 1692 aaKnown RBP24.5■■□□□ 1.51
TSC22D3-208ENST00000486554 PLPPR3Q6T4P5 718 aa24.49■■□□□ 1.51
TSC22D3-208ENST00000486554 KIF27Q86VH2 1401 aa24.46■■□□□ 1.51
TSC22D3-208ENST00000486554 CARMIL1Q5VZK9 1371 aa24.43■■□□□ 1.5
TSC22D3-208ENST00000486554 RAPGEF3O95398 923 aa24.39■■□□□ 1.49
TSC22D3-208ENST00000486554 KIAA0556O60303 1618 aa24.39■■□□□ 1.49
TSC22D3-208ENST00000486554 UGGT2Q9NYU1 1516 aa24.35■■□□□ 1.49
TSC22D3-208ENST00000486554 PHLDB1Q86UU1 1377 aa24.3■■□□□ 1.48
TSC22D3-208ENST00000486554 FRMPD1Q5SYB0 1578 aa24.28■■□□□ 1.48
TSC22D3-208ENST00000486554 ARHGEF40Q8TER5 1519 aa24.25■■□□□ 1.47
TSC22D3-208ENST00000486554 YEATS2Q9ULM3 1422 aa24.24■■□□□ 1.47
TSC22D3-208ENST00000486554 DMRT2Q9Y5R5 561 aa24.23■■□□□ 1.47
TSC22D3-208ENST00000486554 ABCA8O94911 1581 aa24.23■■□□□ 1.47
TSC22D3-208ENST00000486554 POGZQ7Z3K3 1410 aa24.2■■□□□ 1.46
TSC22D3-208ENST00000486554 NEO1Q92859 1461 aa24.19■■□□□ 1.46
TSC22D3-208ENST00000486554 SUPT5HO00267 1087 aaKnown RBP24.19■■□□□ 1.46
TSC22D3-208ENST00000486554 ABCA9Q8IUA7 1624 aa24.18■■□□□ 1.46
TSC22D3-208ENST00000486554 FANCAO15360 1455 aa24.18■■□□□ 1.46
TSC22D3-208ENST00000486554 STRCQ7RTU9 1775 aa24.17■■□□□ 1.46
TSC22D3-208ENST00000486554 PREX1Q8TCU6 1659 aa24.16■■□□□ 1.46
TSC22D3-208ENST00000486554 ARID3CA6NKF2 412 aa24.14■■□□□ 1.45
TSC22D3-208ENST00000486554 FER1L4A9Z1Z3 1794 aa24.14■■□□□ 1.45
TSC22D3-208ENST00000486554 TTC37Q6PGP7 1564 aa24.13■■□□□ 1.45
TSC22D3-208ENST00000486554 MLECQ14165 292 aa24.12■■□□□ 1.45
TSC22D3-208ENST00000486554 AKNAQ7Z591 1439 aa24.09■■□□□ 1.45
TSC22D3-208ENST00000486554 SIGLEC1Q9BZZ2 1709 aa24.08■■□□□ 1.45
TSC22D3-208ENST00000486554 IQSEC2Q5JU85 1478 aa24.07■■□□□ 1.44
TSC22D3-208ENST00000486554 RAPGEF2Q9Y4G8 1499 aa24.06■■□□□ 1.44
TSC22D3-208ENST00000486554 LTBP4Q8N2S1 1624 aa24.06■■□□□ 1.44
TSC22D3-208ENST00000486554 DENND4BO75064 1496 aaPredicted RBP24.05■■□□□ 1.44
TSC22D3-208ENST00000486554 GOLGA3Q08378 1498 aa24.05■■□□□ 1.44
TSC22D3-208ENST00000486554 RICTORQ6R327 1708 aa24.04■■□□□ 1.44
TSC22D3-208ENST00000486554 PTPRTO14522 1441 aa24.04■■□□□ 1.44
TSC22D3-208ENST00000486554 ATP10BO94823 1461 aa24.01■■□□□ 1.43
TSC22D3-208ENST00000486554 UHRF1BP1Q6BDS2 1440 aa24.01■■□□□ 1.43
TSC22D3-208ENST00000486554 ZFYVE16Q7Z3T8 1539 aa24■■□□□ 1.43
TSC22D3-208ENST00000486554 CEBPAP49715 358 aaPredicted RBP23.99■■□□□ 1.43
TSC22D3-208ENST00000486554 FHOD3Q2V2M9 1422 aa23.98■■□□□ 1.43
TSC22D3-208ENST00000486554 EFCAB5A4FU69 1503 aa23.98■■□□□ 1.43
TSC22D3-208ENST00000486554 MED1Q15648 1581 aaPredicted RBP23.95■■□□□ 1.43
TSC22D3-208ENST00000486554 UBAP1LF5GYI3 381 aa23.95■■□□□ 1.42
TSC22D3-208ENST00000486554 CTTNBP2Q8WZ74 1663 aa23.95■■□□□ 1.42
TSC22D3-208ENST00000486554 ZMYM4Q5VZL5 1548 aa23.94■■□□□ 1.42
TSC22D3-208ENST00000486554 ARHGEF12Q9NZN5 1544 aa23.94■■□□□ 1.42
TSC22D3-208ENST00000486554 FAM9AQ8IZU1 332 aaPredicted RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms