RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 CUL7Q14999 1698 aa36.43■■■■□ 3.42
LMBR1-217ENST00000485985 KIF27Q86VH2 1401 aa36.41■■■■□ 3.42
LMBR1-217ENST00000485985 KIF13AQ9H1H9 1805 aa36.38■■■■□ 3.42
LMBR1-217ENST00000485985 IGF1RP08069 1367 aa36.34■■■■□ 3.41
LMBR1-217ENST00000485985 KIAA0586Q9BVV6 1533 aa36.28■■■■□ 3.4
LMBR1-217ENST00000485985 NPM1P06748 294 aaKnown RBP eCLIP36.25■■■■□ 3.39
LMBR1-217ENST00000485985 ABCC10Q5T3U5 1492 aa36.2■■■■□ 3.39
LMBR1-217ENST00000485985 ADCY10Q96PN6 1610 aa36.19■■■■□ 3.38
LMBR1-217ENST00000485985 MAPKBP1O60336 1514 aa36.18■■■■□ 3.38
LMBR1-217ENST00000485985 FAM69CQ0P6D2 419 aa36.18■■■■□ 3.38
LMBR1-217ENST00000485985 CARMIL1Q5VZK9 1371 aa36.1■■■■□ 3.37
LMBR1-217ENST00000485985 DIP2BQ9P265 1576 aa36.09■■■■□ 3.37
LMBR1-217ENST00000485985 PTPRGP23470 1445 aa35.99■■■■□ 3.35
LMBR1-217ENST00000485985 IQGAP2Q13576 1575 aa35.95■■■■□ 3.35
LMBR1-217ENST00000485985 CARMIL2Q6F5E8 1435 aa35.91■■■■□ 3.34
LMBR1-217ENST00000485985 TNIKQ9UKE5 1360 aa35.89■■■■□ 3.34
LMBR1-217ENST00000485985 TTBK1Q5TCY1 1321 aaPredicted RBP35.89■■■■□ 3.34
LMBR1-217ENST00000485985 TSPOAP1O95153 1857 aa35.86■■■■□ 3.33
LMBR1-217ENST00000485985 RAPGEF2Q9Y4G8 1499 aa35.86■■■■□ 3.33
LMBR1-217ENST00000485985 KDM6BO15054 1643 aa35.83■■■■□ 3.33
LMBR1-217ENST00000485985 ABCC2Q92887 1545 aa35.82■■■■□ 3.32
LMBR1-217ENST00000485985 CTTNBP2Q8WZ74 1663 aa35.75■■■■□ 3.31
LMBR1-217ENST00000485985 DISP1Q96F81 1524 aa35.74■■■■□ 3.31
LMBR1-217ENST00000485985 UHRF1BP1LA0JNW5 1464 aa35.73■■■■□ 3.31
LMBR1-217ENST00000485985 ASXL2Q76L83 1435 aa35.72■■■■□ 3.31
LMBR1-217ENST00000485985 PLB1Q6P1J6 1458 aa35.71■■■■□ 3.31
LMBR1-217ENST00000485985 UACAQ9BZF9 1416 aa35.7■■■■□ 3.31
LMBR1-217ENST00000485985 UGGT2Q9NYU1 1516 aa35.7■■■■□ 3.31
LMBR1-217ENST00000485985 KIAA0556O60303 1618 aa35.65■■■■□ 3.3
LMBR1-217ENST00000485985 GLI2P10070 1586 aa35.65■■■■□ 3.3
LMBR1-217ENST00000485985 KDM4FA0A1W2PPD8 638 aa35.62■■■■□ 3.29
LMBR1-217ENST00000485985 PRXQ9BXM0 1461 aa35.59■■■■□ 3.29
LMBR1-217ENST00000485985 PPRC1Q5VV67 1664 aaKnown RBP35.59■■■■□ 3.29
LMBR1-217ENST00000485985 KDM5BQ9UGL1 1544 aa35.57■■■■□ 3.29
LMBR1-217ENST00000485985 EPRSP07814 1512 aaKnown RBP35.5■■■■□ 3.27
LMBR1-217ENST00000485985 ZCCHC11Q5TAX3 1644 aaKnown RBP35.49■■■■□ 3.27
LMBR1-217ENST00000485985 MAP3K4Q9Y6R4 1608 aa35.44■■■■□ 3.26
LMBR1-217ENST00000485985 COL17A1Q9UMD9 1497 aaPredicted RBP35.39■■■■□ 3.26
LMBR1-217ENST00000485985 GOLGA3Q08378 1498 aa35.36■■■■□ 3.25
LMBR1-217ENST00000485985 TEX14Q8IWB6 1497 aa35.35■■■■□ 3.25
LMBR1-217ENST00000485985 WDR7Q9Y4E6 1490 aa35.33■■■■□ 3.25
LMBR1-217ENST00000485985 ABCA8O94911 1581 aa35.27■■■■□ 3.24
LMBR1-217ENST00000485985 ADGRL1O94910 1474 aa35.25■■■■□ 3.23
LMBR1-217ENST00000485985 CSRNP3Q8WYN3 585 aa35.25■■■■□ 3.23
LMBR1-217ENST00000485985 EEA1Q15075 1411 aa35.23■■■■□ 3.23
LMBR1-217ENST00000485985 SAMD9Q5K651 1589 aa35.19■■■■□ 3.22
LMBR1-217ENST00000485985 KCNH8Q96L42 1107 aa35.17■■■■□ 3.22
LMBR1-217ENST00000485985 CD109Q6YHK3 1445 aa35.15■■■■□ 3.22
LMBR1-217ENST00000485985 CFAP43Q8NDM7 1665 aa35.14■■■■□ 3.22
LMBR1-217ENST00000485985 MAGI3Q5TCQ9 1506 aa35.13■■■■□ 3.21
LMBR1-217ENST00000485985 KIF21BO75037 1637 aa35.08■■■■□ 3.21
LMBR1-217ENST00000485985 FAM9AQ8IZU1 332 aaPredicted RBP35.04■■■■□ 3.2
LMBR1-217ENST00000485985 P3H3Q8IVL6 736 aa35.02■■■■□ 3.2
LMBR1-217ENST00000485985 ATP10BO94823 1461 aa34.97■■■■□ 3.19
LMBR1-217ENST00000485985 RAPGEF6Q8TEU7 1601 aa34.97■■■■□ 3.19
LMBR1-217ENST00000485985 ARID3CA6NKF2 412 aa34.97■■■■□ 3.19
LMBR1-217ENST00000485985 CHIC1Q5VXU3 224 aa34.89■■■■□ 3.18
LMBR1-217ENST00000485985 ARAP3Q8WWN8 1544 aa34.87■■■■□ 3.17
LMBR1-217ENST00000485985 FHOD3Q2V2M9 1422 aa34.86■■■■□ 3.17
LMBR1-217ENST00000485985 HECW2Q9P2P5 1572 aa34.84■■■■□ 3.17
LMBR1-217ENST00000485985 EFCAB5A4FU69 1503 aa34.83■■■■□ 3.17
LMBR1-217ENST00000485985 ABCA9Q8IUA7 1624 aa34.83■■■■□ 3.17
LMBR1-217ENST00000485985 RANGAP1P46060 587 aaPredicted RBP34.82■■■■□ 3.16
LMBR1-217ENST00000485985 NUP153P49790 1475 aaKnown RBP34.8■■■■□ 3.16
LMBR1-217ENST00000485985 PHLDB1Q86UU1 1377 aa34.78■■■■□ 3.16
LMBR1-217ENST00000485985 ILDR1Q86SU0 546 aaPredicted RBP34.76■■■■□ 3.16
LMBR1-217ENST00000485985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.74■■■■□ 3.15
LMBR1-217ENST00000485985 HNRNPUL2Q1KMD3 747 aaKnown RBP34.74■■■■□ 3.15
LMBR1-217ENST00000485985 NEO1Q92859 1461 aa34.68■■■■□ 3.14
LMBR1-217ENST00000485985 RAPGEF3O95398 923 aa34.67■■■■□ 3.14
LMBR1-217ENST00000485985 EHMT2Q96KQ7 1210 aa34.65■■■■□ 3.14
LMBR1-217ENST00000485985 PLEKHD1A6NEE1 506 aa34.57■■■■□ 3.12
LMBR1-217ENST00000485985 UBTFP17480 764 aaKnown RBP34.56■■■■□ 3.12
LMBR1-217ENST00000485985 FRMPD1Q5SYB0 1578 aa34.55■■■■□ 3.12
LMBR1-217ENST00000485985 ARHGAP35Q9NRY4 1499 aa34.55■■■■□ 3.12
LMBR1-217ENST00000485985 ADAMTSL3P82987 1691 aa34.54■■■■□ 3.12
LMBR1-217ENST00000485985 CDK13Q14004 1512 aaKnown RBP34.52■■■■□ 3.12
LMBR1-217ENST00000485985 PTPRMP28827 1452 aa34.5■■■■□ 3.11
LMBR1-217ENST00000485985 HECW1Q76N89 1606 aa34.48■■■■□ 3.11
LMBR1-217ENST00000485985 TTC37Q6PGP7 1564 aa34.46■■■■□ 3.11
LMBR1-217ENST00000485985 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.45■■■■□ 3.11e-6■■■□□ 16.9
LMBR1-217ENST00000485985 BCORL1Q5H9F3 1711 aa34.44■■■■□ 3.1
LMBR1-217ENST00000485985 ARID4BQ4LE39 1312 aaPredicted RBP34.43■■■■□ 3.1
LMBR1-217ENST00000485985 FMN1Q68DA7 1419 aa34.43■■■■□ 3.1
LMBR1-217ENST00000485985 AKNAQ7Z591 1439 aa34.43■■■■□ 3.1
LMBR1-217ENST00000485985 DENND4BO75064 1496 aaPredicted RBP34.43■■■■□ 3.1
LMBR1-217ENST00000485985 LRRIQ1Q96JM4 1722 aa34.42■■■■□ 3.1
LMBR1-217ENST00000485985 FANCAO15360 1455 aa34.41■■■■□ 3.1
LMBR1-217ENST00000485985 RICTORQ6R327 1708 aa34.41■■■■□ 3.1
LMBR1-217ENST00000485985 CFAP74Q9C0B2 1584 aa34.39■■■■□ 3.1
LMBR1-217ENST00000485985 ARHGEF40Q8TER5 1519 aa34.37■■■■□ 3.09
LMBR1-217ENST00000485985 MADDQ8WXG6 1647 aa34.37■■■■□ 3.09
LMBR1-217ENST00000485985 ZMYM4Q5VZL5 1548 aa34.27■■■■□ 3.08
LMBR1-217ENST00000485985 PCF11O94913 1555 aaKnown RBP34.27■■■■□ 3.08
LMBR1-217ENST00000485985 KIF14Q15058 1648 aa34.26■■■■□ 3.07
LMBR1-217ENST00000485985 MYO5CQ9NQX4 1742 aa34.25■■■■□ 3.07
LMBR1-217ENST00000485985 RIMS1Q86UR5 1692 aaKnown RBP34.24■■■■□ 3.07
LMBR1-217ENST00000485985 PLCH2O75038 1416 aa34.22■■■■□ 3.07
LMBR1-217ENST00000485985 ZFYVE16Q7Z3T8 1539 aa34.22■■■■□ 3.07
LMBR1-217ENST00000485985 ATP1B4Q9UN42 357 aaPredicted RBP34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms