RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 CNKSR2Q8WXI2 1034 aa13.26□□□□□ -0.29
MACF1-220ENST00000485063 FHAD1B1AJZ9 1412 aa13.25□□□□□ -0.29
MACF1-220ENST00000485063 GRIN2AQ12879 1464 aa13.23□□□□□ -0.29
MACF1-220ENST00000485063 CUL7Q14999 1698 aa13.21□□□□□ -0.29
MACF1-220ENST00000485063 DCAF8L1A6NGE4 600 aa13.21□□□□□ -0.29
MACF1-220ENST00000485063 CLASP1Q7Z460 1538 aa13.18□□□□□ -0.3
MACF1-220ENST00000485063 RIMBP3CA6NJZ7 1639 aa13.18□□□□□ -0.3
MACF1-220ENST00000485063 RIMBP3BA6NNM3 1639 aa13.18□□□□□ -0.3
MACF1-220ENST00000485063 RIMBP3Q9UFD9 1639 aa13.18□□□□□ -0.3
MACF1-220ENST00000485063 RNF216Q9NWF9 866 aaPredicted RBP13.18□□□□□ -0.3
MACF1-220ENST00000485063 IGF1RP08069 1367 aa13.17□□□□□ -0.3
MACF1-220ENST00000485063 ARHGEF11O15085 1522 aa13.16□□□□□ -0.3
MACF1-220ENST00000485063 RNF39Q9H2S5 420 aa13.15□□□□□ -0.3
MACF1-220ENST00000485063 CEP170Q5SW79 1584 aa13.15□□□□□ -0.3
MACF1-220ENST00000485063 NUP160Q12769 1436 aa13.13□□□□□ -0.31
MACF1-220ENST00000485063 CARMIL1Q5VZK9 1371 aa13.13□□□□□ -0.31
MACF1-220ENST00000485063 RUSC2Q8N2Y8 1516 aa13.1□□□□□ -0.31
MACF1-220ENST00000485063 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
MACF1-220ENST00000485063 CYB5RLQ6IPT4 315 aa13.06□□□□□ -0.32
MACF1-220ENST00000485063 SHROOM2Q13796 1616 aa13.06□□□□□ -0.32
MACF1-220ENST00000485063 EEA1Q15075 1411 aa13.05□□□□□ -0.32
MACF1-220ENST00000485063 KIAA0586Q9BVV6 1533 aa13.04□□□□□ -0.32
MACF1-220ENST00000485063 ARAP1Q96P48 1450 aa13.04□□□□□ -0.32
MACF1-220ENST00000485063 JPH4Q96JJ6 628 aa13.03□□□□□ -0.32
MACF1-220ENST00000485063 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
MACF1-220ENST00000485063 PRG4Q92954 1404 aaPredicted RBP13□□□□□ -0.33
MACF1-220ENST00000485063 IQGAP2Q13576 1575 aa12.99□□□□□ -0.33
MACF1-220ENST00000485063 C1QBPQ07021 282 aaKnown RBP12.99□□□□□ -0.33
MACF1-220ENST00000485063 CTTNBP2Q8WZ74 1663 aa12.99□□□□□ -0.33
MACF1-220ENST00000485063 ERCC6L2Q5T890 1561 aa12.98□□□□□ -0.33
MACF1-220ENST00000485063 PRXQ9BXM0 1461 aa12.97□□□□□ -0.33
MACF1-220ENST00000485063 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
MACF1-220ENST00000485063 CARMIL2Q6F5E8 1435 aa12.95□□□□□ -0.34
MACF1-220ENST00000485063 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
MACF1-220ENST00000485063 UGGT2Q9NYU1 1516 aa12.89□□□□□ -0.35
MACF1-220ENST00000485063 KIF21BO75037 1637 aa12.89□□□□□ -0.35
MACF1-220ENST00000485063 GOLGA3Q08378 1498 aa12.87□□□□□ -0.35
MACF1-220ENST00000485063 TNIKQ9UKE5 1360 aa12.87□□□□□ -0.35
MACF1-220ENST00000485063 TTBK1Q5TCY1 1321 aaPredicted RBP12.87□□□□□ -0.35
MACF1-220ENST00000485063 NPM1P06748 294 aaKnown RBP eCLIP12.86□□□□□ -0.35
MACF1-220ENST00000485063 PTPRGP23470 1445 aa12.86□□□□□ -0.35
MACF1-220ENST00000485063 KIAA0556O60303 1618 aa12.85□□□□□ -0.35
MACF1-220ENST00000485063 DISP1Q96F81 1524 aa12.85□□□□□ -0.35
MACF1-220ENST00000485063 TRHP20396 242 aaPredicted RBP12.84□□□□□ -0.35
MACF1-220ENST00000485063 UBTFP17480 764 aaKnown RBP12.82□□□□□ -0.36
MACF1-220ENST00000485063 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
MACF1-220ENST00000485063 ADCY10Q96PN6 1610 aa12.8□□□□□ -0.36
MACF1-220ENST00000485063 RANGAP1P46060 587 aaPredicted RBP12.77□□□□□ -0.37
MACF1-220ENST00000485063 UACAQ9BZF9 1416 aa12.77□□□□□ -0.37
MACF1-220ENST00000485063 P3H3Q8IVL6 736 aa12.76□□□□□ -0.37
MACF1-220ENST00000485063 SAMD9Q5K651 1589 aa12.76□□□□□ -0.37
MACF1-220ENST00000485063 UHRF1BP1LA0JNW5 1464 aa12.75□□□□□ -0.37
MACF1-220ENST00000485063 ABCC2Q92887 1545 aa12.75□□□□□ -0.37
MACF1-220ENST00000485063 EFCAB5A4FU69 1503 aa12.73□□□□□ -0.37
MACF1-220ENST00000485063 MAPKBP1O60336 1514 aa12.72□□□□□ -0.37
MACF1-220ENST00000485063 PLB1Q6P1J6 1458 aa12.7□□□□□ -0.38
MACF1-220ENST00000485063 ABCA8O94911 1581 aa12.69□□□□□ -0.38
MACF1-220ENST00000485063 ZCCHC11Q5TAX3 1644 aaKnown RBP12.69□□□□□ -0.38
MACF1-220ENST00000485063 KIF13AQ9H1H9 1805 aa12.69□□□□□ -0.38
MACF1-220ENST00000485063 KDM5BQ9UGL1 1544 aa12.68□□□□□ -0.38
MACF1-220ENST00000485063 RAPGEF6Q8TEU7 1601 aa12.67□□□□□ -0.38
MACF1-220ENST00000485063 NPM3O75607 178 aaKnown RBP12.67□□□□□ -0.38
MACF1-220ENST00000485063 FHOD3Q2V2M9 1422 aa12.67□□□□□ -0.38
MACF1-220ENST00000485063 ABCC10Q5T3U5 1492 aa12.66□□□□□ -0.38
MACF1-220ENST00000485063 FAM69CQ0P6D2 419 aa12.66□□□□□ -0.38
MACF1-220ENST00000485063 ASXL2Q76L83 1435 aa12.65□□□□□ -0.38
MACF1-220ENST00000485063 DIP2BQ9P265 1576 aa12.64□□□□□ -0.39
MACF1-220ENST00000485063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.64□□□□□ -0.393e-7■■■■□ 23.3
MACF1-220ENST00000485063 ARHGAP35Q9NRY4 1499 aa12.63□□□□□ -0.39
MACF1-220ENST00000485063 FMN1Q68DA7 1419 aa12.62□□□□□ -0.39
MACF1-220ENST00000485063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.62□□□□□ -0.39
MACF1-220ENST00000485063 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
MACF1-220ENST00000485063 TSPOAP1O95153 1857 aa12.6□□□□□ -0.39
MACF1-220ENST00000485063 WDR7Q9Y4E6 1490 aa12.59□□□□□ -0.39
MACF1-220ENST00000485063 ARID3CA6NKF2 412 aa12.59□□□□□ -0.39
MACF1-220ENST00000485063 POTEHQ6S545 545 aa12.59□□□□□ -0.39
MACF1-220ENST00000485063 ATP1B4Q9UN42 357 aaPredicted RBP12.59□□□□□ -0.39
MACF1-220ENST00000485063 GLI2P10070 1586 aa12.59□□□□□ -0.39
MACF1-220ENST00000485063 ATP10BO94823 1461 aa12.59□□□□□ -0.39
MACF1-220ENST00000485063 CLIP1P30622 1438 aa12.58□□□□□ -0.4
MACF1-220ENST00000485063 HECW1Q76N89 1606 aa12.58□□□□□ -0.4
MACF1-220ENST00000485063 EPRSP07814 1512 aaKnown RBP12.57□□□□□ -0.4
MACF1-220ENST00000485063 NUP153P49790 1475 aaKnown RBP12.57□□□□□ -0.4
MACF1-220ENST00000485063 KCNH8Q96L42 1107 aa12.56□□□□□ -0.4
MACF1-220ENST00000485063 PLEKHD1A6NEE1 506 aa12.54□□□□□ -0.4
MACF1-220ENST00000485063 MAP3K4Q9Y6R4 1608 aa12.54□□□□□ -0.4
MACF1-220ENST00000485063 CFAP43Q8NDM7 1665 aa12.54□□□□□ -0.4
MACF1-220ENST00000485063 LOC105371045A0A1W2PR82 267 aa12.52□□□□□ -0.41
MACF1-220ENST00000485063 CDK11AQ9UQ88 783 aaPredicted RBP12.52□□□□□ -0.41
MACF1-220ENST00000485063 TEX14Q8IWB6 1497 aa12.52□□□□□ -0.41
MACF1-220ENST00000485063 CEP162Q5TB80 1403 aa12.51□□□□□ -0.41
MACF1-220ENST00000485063 PCF11O94913 1555 aaKnown RBP12.49□□□□□ -0.41
MACF1-220ENST00000485063 CDK13Q14004 1512 aaKnown RBP12.49□□□□□ -0.41
MACF1-220ENST00000485063 CD109Q6YHK3 1445 aa12.49□□□□□ -0.41
MACF1-220ENST00000485063 CASKIN1Q8WXD9 1431 aa12.49□□□□□ -0.41
MACF1-220ENST00000485063 PPRC1Q5VV67 1664 aaKnown RBP12.48□□□□□ -0.41
MACF1-220ENST00000485063 KDM6BO15054 1643 aa12.48□□□□□ -0.41
MACF1-220ENST00000485063 CCDC18Q5T9S5 1454 aa12.48□□□□□ -0.41
MACF1-220ENST00000485063 ABCA9Q8IUA7 1624 aa12.48□□□□□ -0.41
MACF1-220ENST00000485063 FYCO1Q9BQS8 1478 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms