RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 AEBP2Q6ZN18 517 aaPredicted RBP20.39■□□□□ 0.85
MACF1-220ENST00000485063 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
MACF1-220ENST00000485063 NISCHQ9Y2I1 1504 aa18.82■□□□□ 0.6
MACF1-220ENST00000485063 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
MACF1-220ENST00000485063 PHF23Q9BUL5 403 aaPredicted RBP17.22■□□□□ 0.35
MACF1-220ENST00000485063 CCDC180Q9P1Z9 1646 aa16.78■□□□□ 0.28
MACF1-220ENST00000485063 ABCC9O60706 1549 aa16.36■□□□□ 0.21
MACF1-220ENST00000485063 FOXD1Q16676 465 aa16.28■□□□□ 0.2
MACF1-220ENST00000485063 POTEDQ86YR6 584 aa16.18■□□□□ 0.18
MACF1-220ENST00000485063 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
MACF1-220ENST00000485063 DCAF8L2P0C7V8 631 aa15.79■□□□□ 0.12
MACF1-220ENST00000485063 NACADO15069 1562 aa15.76■□□□□ 0.11
MACF1-220ENST00000485063 ZCCHC6Q5VYS8 1495 aaKnown RBP15.67■□□□□ 0.1
MACF1-220ENST00000485063 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
MACF1-220ENST00000485063 DCAF1Q9Y4B6 1507 aa15.58■□□□□ 0.09
MACF1-220ENST00000485063 MSH5O43196 834 aa15.56■□□□□ 0.08
MACF1-220ENST00000485063 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
MACF1-220ENST00000485063 PLPPR3Q6T4P5 718 aa15.4■□□□□ 0.06
MACF1-220ENST00000485063 SCRIBQ14160 1630 aa15.28■□□□□ 0.04
MACF1-220ENST00000485063 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
MACF1-220ENST00000485063 BICRAQ9NZM4 1560 aa15.24■□□□□ 0.03
MACF1-220ENST00000485063 PIAS4Q8N2W9 510 aaPredicted RBP15.18■□□□□ 0.02
MACF1-220ENST00000485063 SHROOM4Q9ULL8 1493 aa15.14■□□□□ 0.01
MACF1-220ENST00000485063 PPP6R1Q9UPN7 881 aa15.06■□□□□ 0
MACF1-220ENST00000485063 ADRA2BP18089 450 aa15□□□□□ -0.01
MACF1-220ENST00000485063 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
MACF1-220ENST00000485063 EIF4G1Q04637 1599 aaKnown RBP14.87□□□□□ -0.03
MACF1-220ENST00000485063 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
MACF1-220ENST00000485063 CECR2Q9BXF3 1484 aa14.71□□□□□ -0.05
MACF1-220ENST00000485063 BAZ1AQ9NRL2 1556 aaPredicted RBP14.63□□□□□ -0.07
MACF1-220ENST00000485063 SMARCA4P51532 1647 aa14.62□□□□□ -0.07
MACF1-220ENST00000485063 SMARCA2P51531 1590 aa14.55□□□□□ -0.08
MACF1-220ENST00000485063 NCAPD3P42695 1498 aa14.51□□□□□ -0.09
MACF1-220ENST00000485063 ATAD2BQ9ULI0 1458 aa14.51□□□□□ -0.09
MACF1-220ENST00000485063 MROH2BQ7Z745 1585 aa14.49□□□□□ -0.09
MACF1-220ENST00000485063 PEG3Q9GZU2 1588 aa14.47□□□□□ -0.09
MACF1-220ENST00000485063 HMGXB3Q12766 1538 aa14.46□□□□□ -0.1
MACF1-220ENST00000485063 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
MACF1-220ENST00000485063 WIZO95785 1651 aa14.37□□□□□ -0.11
MACF1-220ENST00000485063 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
MACF1-220ENST00000485063 TOP2AP11388 1531 aaKnown RBP14.21□□□□□ -0.13
MACF1-220ENST00000485063 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
MACF1-220ENST00000485063 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
MACF1-220ENST00000485063 NESP48681 1621 aa14.14□□□□□ -0.15
MACF1-220ENST00000485063 CADPSQ9ULU8 1353 aa14.09□□□□□ -0.15
MACF1-220ENST00000485063 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
MACF1-220ENST00000485063 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
MACF1-220ENST00000485063 KIF21AQ7Z4S6 1674 aa14.03□□□□□ -0.16
MACF1-220ENST00000485063 SUPT5HO00267 1087 aaKnown RBP14.02□□□□□ -0.17
MACF1-220ENST00000485063 CFTRP13569 1480 aa14□□□□□ -0.17
MACF1-220ENST00000485063 PRDM2Q13029 1718 aa13.99□□□□□ -0.17
MACF1-220ENST00000485063 CUX2O14529 1486 aa13.98□□□□□ -0.17
MACF1-220ENST00000485063 THOC2Q8NI27 1593 aaKnown RBP13.95□□□□□ -0.18
MACF1-220ENST00000485063 FANCD2Q9BXW9 1451 aa13.94□□□□□ -0.18
MACF1-220ENST00000485063 CEP164Q9UPV0 1460 aa13.94□□□□□ -0.18
MACF1-220ENST00000485063 MRC2Q9UBG0 1479 aa13.91□□□□□ -0.18
MACF1-220ENST00000485063 SCAF1Q9H7N4 1312 aaKnown RBP13.89□□□□□ -0.19
MACF1-220ENST00000485063 DMRT2Q9Y5R5 561 aa13.87□□□□□ -0.19
MACF1-220ENST00000485063 WDR62O43379 1518 aa13.85□□□□□ -0.19
MACF1-220ENST00000485063 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
MACF1-220ENST00000485063 ABCC8Q09428 1581 aa13.77□□□□□ -0.21
MACF1-220ENST00000485063 URB2Q14146 1524 aaKnown RBP13.77□□□□□ -0.21
MACF1-220ENST00000485063 CACNB1Q02641 598 aaPredicted RBP13.73□□□□□ -0.21
MACF1-220ENST00000485063 DNMBPQ6XZF7 1577 aa13.72□□□□□ -0.21
MACF1-220ENST00000485063 TOPBP1Q92547 1522 aa13.71□□□□□ -0.21
MACF1-220ENST00000485063 IFT140Q96RY7 1462 aa13.64□□□□□ -0.23
MACF1-220ENST00000485063 CUX1P39880 1505 aa13.59□□□□□ -0.23
MACF1-220ENST00000485063 POLA1P09884 1462 aaPredicted RBP13.59□□□□□ -0.23
MACF1-220ENST00000485063 FGD5Q6ZNL6 1462 aa13.57□□□□□ -0.24
MACF1-220ENST00000485063 SOGA1O94964 1423 aa13.56□□□□□ -0.24
MACF1-220ENST00000485063 TARBP1Q13395 1621 aaKnown RBP13.56□□□□□ -0.24
MACF1-220ENST00000485063 WRNQ14191 1432 aaPredicted RBP eCLIP13.55□□□□□ -0.24
MACF1-220ENST00000485063 ZNF608Q9ULD9 1512 aaPredicted RBP13.53□□□□□ -0.24
MACF1-220ENST00000485063 EIF4G3O43432 1585 aaKnown RBP13.53□□□□□ -0.24
MACF1-220ENST00000485063 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
MACF1-220ENST00000485063 RAD54L2Q9Y4B4 1467 aa13.52□□□□□ -0.25
MACF1-220ENST00000485063 TOP2BQ02880 1626 aa13.52□□□□□ -0.25
MACF1-220ENST00000485063 WDR97A6NE52 1622 aa13.51□□□□□ -0.25
MACF1-220ENST00000485063 DNAJC5Q9H3Z4 198 aa13.51□□□□□ -0.25
MACF1-220ENST00000485063 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
MACF1-220ENST00000485063 AQRO60306 1485 aaKnown RBP eCLIP13.48□□□□□ -0.25
MACF1-220ENST00000485063 TDRD9Q8NDG6 1382 aaKnown RBP13.45□□□□□ -0.26
MACF1-220ENST00000485063 ABCA10Q8WWZ4 1543 aa13.44□□□□□ -0.26
MACF1-220ENST00000485063 PPP4R3CPQ6ZMV5 832 aa13.42□□□□□ -0.26
MACF1-220ENST00000485063 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
MACF1-220ENST00000485063 PBRM1Q86U86 1689 aa13.41□□□□□ -0.26
MACF1-220ENST00000485063 GRIN2BQ13224 1484 aa13.4□□□□□ -0.26
MACF1-220ENST00000485063 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.26
MACF1-220ENST00000485063 ABCA5Q8WWZ7 1642 aa13.39□□□□□ -0.27
MACF1-220ENST00000485063 CHD1O14646 1710 aa13.38□□□□□ -0.27
MACF1-220ENST00000485063 MAGI1Q96QZ7 1491 aaPredicted RBP13.37□□□□□ -0.27
MACF1-220ENST00000485063 FBLN2P98095 1184 aa13.37□□□□□ -0.27
MACF1-220ENST00000485063 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
MACF1-220ENST00000485063 CHMP7Q8WUX9 453 aaPredicted RBP13.33□□□□□ -0.28
MACF1-220ENST00000485063 SYNJ2O15056 1496 aa13.31□□□□□ -0.28
MACF1-220ENST00000485063 HOXD11P31277 338 aaPredicted RBP13.31□□□□□ -0.28
MACF1-220ENST00000485063 ERICH3Q5RHP9 1530 aa13.29□□□□□ -0.28
MACF1-220ENST00000485063 KIF27Q86VH2 1401 aa13.28□□□□□ -0.28
MACF1-220ENST00000485063 TRIM41Q8WV44 630 aa13.27□□□□□ -0.29
MACF1-220ENST00000485063 ADAMTS12P58397 1594 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms