RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 PRG4Q92954 1404 aaPredicted RBP13.05□□□□□ -0.32
SORT1-205ENST00000483508 NPM1P06748 294 aaKnown RBP eCLIP13.05□□□□□ -0.32
SORT1-205ENST00000483508 LOC105371045A0A1W2PR82 267 aa13□□□□□ -0.33
SORT1-205ENST00000483508 SENP3Q9H4L4 574 aaPredicted RBP12.99□□□□□ -0.33
SORT1-205ENST00000483508 PCGF6Q9BYE7 350 aa12.98□□□□□ -0.33
SORT1-205ENST00000483508 KIF27Q86VH2 1401 aa12.96□□□□□ -0.33
SORT1-205ENST00000483508 FAM69CQ0P6D2 419 aa12.96□□□□□ -0.33
SORT1-205ENST00000483508 RUSC2Q8N2Y8 1516 aa12.96□□□□□ -0.33
SORT1-205ENST00000483508 TTBK1Q5TCY1 1321 aaPredicted RBP12.93□□□□□ -0.34
SORT1-205ENST00000483508 KIF13AQ9H1H9 1805 aa12.93□□□□□ -0.34
SORT1-205ENST00000483508 IGF1RP08069 1367 aa12.93□□□□□ -0.34
SORT1-205ENST00000483508 CUL7Q14999 1698 aa12.93□□□□□ -0.34
SORT1-205ENST00000483508 TRIM26Q12899 539 aaPredicted RBP12.92□□□□□ -0.34
SORT1-205ENST00000483508 KIAA0586Q9BVV6 1533 aa12.92□□□□□ -0.34
SORT1-205ENST00000483508 ABCC10Q5T3U5 1492 aa12.89□□□□□ -0.35
SORT1-205ENST00000483508 CARMIL1Q5VZK9 1371 aa12.88□□□□□ -0.35
SORT1-205ENST00000483508 PHF23Q9BUL5 403 aaPredicted RBP12.87□□□□□ -0.35
SORT1-205ENST00000483508 ADCY10Q96PN6 1610 aa12.87□□□□□ -0.35
SORT1-205ENST00000483508 MAPKBP1O60336 1514 aa12.86□□□□□ -0.35
SORT1-205ENST00000483508 PTPRGP23470 1445 aa12.86□□□□□ -0.35
SORT1-205ENST00000483508 CARMIL2Q6F5E8 1435 aa12.86□□□□□ -0.35
SORT1-205ENST00000483508 DIP2BQ9P265 1576 aa12.83□□□□□ -0.36
SORT1-205ENST00000483508 TSPOAP1O95153 1857 aa12.82□□□□□ -0.36
SORT1-205ENST00000483508 TNIKQ9UKE5 1360 aa12.82□□□□□ -0.36
SORT1-205ENST00000483508 KDM6BO15054 1643 aa12.8□□□□□ -0.36
SORT1-205ENST00000483508 IQGAP2Q13576 1575 aa12.79□□□□□ -0.36
SORT1-205ENST00000483508 ABCC2Q92887 1545 aa12.76□□□□□ -0.37
SORT1-205ENST00000483508 PLB1Q6P1J6 1458 aa12.74□□□□□ -0.37
SORT1-205ENST00000483508 RAPGEF2Q9Y4G8 1499 aa12.74□□□□□ -0.37
SORT1-205ENST00000483508 ZEB1P37275 1124 aaPredicted RBP12.74□□□□□ -0.37
SORT1-205ENST00000483508 ASXL2Q76L83 1435 aa12.73□□□□□ -0.37
SORT1-205ENST00000483508 UACAQ9BZF9 1416 aa12.73□□□□□ -0.37
SORT1-205ENST00000483508 FAM9AQ8IZU1 332 aaPredicted RBP12.73□□□□□ -0.37
SORT1-205ENST00000483508 EEA1Q15075 1411 aa12.72□□□□□ -0.37
SORT1-205ENST00000483508 UHRF1BP1LA0JNW5 1464 aa12.71□□□□□ -0.38
SORT1-205ENST00000483508 DISP1Q96F81 1524 aa12.69□□□□□ -0.38
SORT1-205ENST00000483508 GLI2P10070 1586 aa12.68□□□□□ -0.38
SORT1-205ENST00000483508 UGGT2Q9NYU1 1516 aa12.67□□□□□ -0.38
SORT1-205ENST00000483508 KDM4FA0A1W2PPD8 638 aa12.67□□□□□ -0.38
SORT1-205ENST00000483508 KIAA0556O60303 1618 aa12.66□□□□□ -0.38
SORT1-205ENST00000483508 KDM5BQ9UGL1 1544 aa12.65□□□□□ -0.38
SORT1-205ENST00000483508 ZCCHC11Q5TAX3 1644 aaKnown RBP12.65□□□□□ -0.38
SORT1-205ENST00000483508 TEX14Q8IWB6 1497 aa12.65□□□□□ -0.38
SORT1-205ENST00000483508 CTTNBP2Q8WZ74 1663 aa12.64□□□□□ -0.39
SORT1-205ENST00000483508 EPRSP07814 1512 aaKnown RBP12.64□□□□□ -0.39
SORT1-205ENST00000483508 GOLGA3Q08378 1498 aa12.64□□□□□ -0.39
SORT1-205ENST00000483508 PPRC1Q5VV67 1664 aaKnown RBP12.62□□□□□ -0.39
SORT1-205ENST00000483508 KCNH8Q96L42 1107 aa12.62□□□□□ -0.39
SORT1-205ENST00000483508 PPARGC1BQ86YN6 1023 aaKnown RBP12.61□□□□□ -0.39
SORT1-205ENST00000483508 MAP3K4Q9Y6R4 1608 aa12.61□□□□□ -0.39
SORT1-205ENST00000483508 WDR7Q9Y4E6 1490 aa12.59□□□□□ -0.39
SORT1-205ENST00000483508 P3H3Q8IVL6 736 aa12.57□□□□□ -0.4
SORT1-205ENST00000483508 ADGRL1O94910 1474 aa12.57□□□□□ -0.4
SORT1-205ENST00000483508 CD109Q6YHK3 1445 aa12.56□□□□□ -0.4
SORT1-205ENST00000483508 KIF21BO75037 1637 aa12.55□□□□□ -0.4
SORT1-205ENST00000483508 ARID3CA6NKF2 412 aa12.55□□□□□ -0.4
SORT1-205ENST00000483508 PRXQ9BXM0 1461 aa12.54□□□□□ -0.4
SORT1-205ENST00000483508 COL17A1Q9UMD9 1497 aaPredicted RBP12.54□□□□□ -0.4
SORT1-205ENST00000483508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
SORT1-205ENST00000483508 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
SORT1-205ENST00000483508 ABCA8O94911 1581 aa12.54□□□□□ -0.4
SORT1-205ENST00000483508 CEP162Q5TB80 1403 aa12.54□□□□□ -0.4
SORT1-205ENST00000483508 CFAP43Q8NDM7 1665 aa12.53□□□□□ -0.4
SORT1-205ENST00000483508 CSRNP3Q8WYN3 585 aa12.52□□□□□ -0.41
SORT1-205ENST00000483508 RANGAP1P46060 587 aaPredicted RBP12.51□□□□□ -0.41
SORT1-205ENST00000483508 MAGI3Q5TCQ9 1506 aa12.5□□□□□ -0.41
SORT1-205ENST00000483508 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
SORT1-205ENST00000483508 ATP10BO94823 1461 aa12.46□□□□□ -0.42
SORT1-205ENST00000483508 RAPGEF6Q8TEU7 1601 aa12.43□□□□□ -0.42
SORT1-205ENST00000483508 PHLDB1Q86UU1 1377 aa12.42□□□□□ -0.42
SORT1-205ENST00000483508 HECW2Q9P2P5 1572 aa12.41□□□□□ -0.42
SORT1-205ENST00000483508 SAMD9Q5K651 1589 aa12.4□□□□□ -0.42
SORT1-205ENST00000483508 PLEKHD1A6NEE1 506 aa12.4□□□□□ -0.42
SORT1-205ENST00000483508 ILDR1Q86SU0 546 aaPredicted RBP12.4□□□□□ -0.42
SORT1-205ENST00000483508 ARAP3Q8WWN8 1544 aa12.4□□□□□ -0.42
SORT1-205ENST00000483508 ABCA9Q8IUA7 1624 aa12.4□□□□□ -0.42
SORT1-205ENST00000483508 ARID4BQ4LE39 1312 aaPredicted RBP12.39□□□□□ -0.43
SORT1-205ENST00000483508 RAPGEF3O95398 923 aa12.39□□□□□ -0.43
SORT1-205ENST00000483508 FHOD3Q2V2M9 1422 aa12.37□□□□□ -0.43
SORT1-205ENST00000483508 NEO1Q92859 1461 aa12.36□□□□□ -0.43
SORT1-205ENST00000483508 UBTFP17480 764 aaKnown RBP12.36□□□□□ -0.43
SORT1-205ENST00000483508 ATP1B4Q9UN42 357 aaPredicted RBP12.36□□□□□ -0.43
SORT1-205ENST00000483508 NUP153P49790 1475 aaKnown RBP12.34□□□□□ -0.43
SORT1-205ENST00000483508 CLIP1P30622 1438 aa12.32□□□□□ -0.44
SORT1-205ENST00000483508 VPS8Q8N3P4 1428 aa12.31□□□□□ -0.44
SORT1-205ENST00000483508 EFCAB5A4FU69 1503 aa12.31□□□□□ -0.44
SORT1-205ENST00000483508 CFAP74Q9C0B2 1584 aa12.3□□□□□ -0.44
SORT1-205ENST00000483508 DENND4BO75064 1496 aaPredicted RBP12.3□□□□□ -0.44
SORT1-205ENST00000483508 AKNAQ7Z591 1439 aa12.29□□□□□ -0.44
SORT1-205ENST00000483508 FANCAO15360 1455 aa12.29□□□□□ -0.44
SORT1-205ENST00000483508 PTPRMP28827 1452 aa12.29□□□□□ -0.44
SORT1-205ENST00000483508 PLPPR3Q6T4P5 718 aa12.29□□□□□ -0.44
SORT1-205ENST00000483508 CCER1Q8TC90 406 aaPredicted RBP12.29□□□□□ -0.44
SORT1-205ENST00000483508 ADAMTSL3P82987 1691 aa12.28□□□□□ -0.44
SORT1-205ENST00000483508 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.27□□□□□ -0.45
SORT1-205ENST00000483508 FRMPD1Q5SYB0 1578 aa12.26□□□□□ -0.45
SORT1-205ENST00000483508 BCORL1Q5H9F3 1711 aa12.26□□□□□ -0.45
SORT1-205ENST00000483508 CDK11AQ9UQ88 783 aaPredicted RBP12.26□□□□□ -0.45
SORT1-205ENST00000483508 POGZQ7Z3K3 1410 aa12.26□□□□□ -0.45
SORT1-205ENST00000483508 MYT1LQ9UL68 1186 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms