RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 KIF27Q86VH2 1401 aa23.38■■□□□ 1.33
PTPN7-212ENST00000480836 KIAA0586Q9BVV6 1533 aa23.35■■□□□ 1.33
PTPN7-212ENST00000480836 KIF13AQ9H1H9 1805 aa23.35■■□□□ 1.33
PTPN7-212ENST00000480836 CARMIL1Q5VZK9 1371 aa23.29■■□□□ 1.32
PTPN7-212ENST00000480836 ADCY10Q96PN6 1610 aa23.28■■□□□ 1.32
PTPN7-212ENST00000480836 CUL7Q14999 1698 aa23.26■■□□□ 1.31
PTPN7-212ENST00000480836 FAM69CQ0P6D2 419 aa23.26■■□□□ 1.31
PTPN7-212ENST00000480836 ABCC10Q5T3U5 1492 aa23.23■■□□□ 1.31
PTPN7-212ENST00000480836 TTBK1Q5TCY1 1321 aaPredicted RBP23.2■■□□□ 1.3
PTPN7-212ENST00000480836 NPM1P06748 294 aaKnown RBP eCLIP23.2■■□□□ 1.3
PTPN7-212ENST00000480836 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
PTPN7-212ENST00000480836 MAPKBP1O60336 1514 aa23.18■■□□□ 1.3
PTPN7-212ENST00000480836 PTPRGP23470 1445 aa23.16■■□□□ 1.3
PTPN7-212ENST00000480836 DIP2BQ9P265 1576 aa23.15■■□□□ 1.3
PTPN7-212ENST00000480836 TNIKQ9UKE5 1360 aa23.08■■□□□ 1.29
PTPN7-212ENST00000480836 DISP1Q96F81 1524 aa23.08■■□□□ 1.28
PTPN7-212ENST00000480836 IQGAP2Q13576 1575 aa23.07■■□□□ 1.28
PTPN7-212ENST00000480836 CARMIL2Q6F5E8 1435 aa23.03■■□□□ 1.28
PTPN7-212ENST00000480836 RAPGEF2Q9Y4G8 1499 aa23.03■■□□□ 1.28
PTPN7-212ENST00000480836 ABCC2Q92887 1545 aa23.02■■□□□ 1.28
PTPN7-212ENST00000480836 TSPOAP1O95153 1857 aa23.01■■□□□ 1.27
PTPN7-212ENST00000480836 ASXL2Q76L83 1435 aa22.98■■□□□ 1.27
PTPN7-212ENST00000480836 UACAQ9BZF9 1416 aa22.97■■□□□ 1.27
PTPN7-212ENST00000480836 UGGT2Q9NYU1 1516 aa22.97■■□□□ 1.27
PTPN7-212ENST00000480836 UHRF1BP1LA0JNW5 1464 aa22.96■■□□□ 1.27
PTPN7-212ENST00000480836 KDM4FA0A1W2PPD8 638 aa22.92■■□□□ 1.26
PTPN7-212ENST00000480836 KDM6BO15054 1643 aa22.92■■□□□ 1.26
PTPN7-212ENST00000480836 PPRC1Q5VV67 1664 aaKnown RBP22.9■■□□□ 1.26
PTPN7-212ENST00000480836 KDM5BQ9UGL1 1544 aa22.89■■□□□ 1.26
PTPN7-212ENST00000480836 KIAA0556O60303 1618 aa22.89■■□□□ 1.25
PTPN7-212ENST00000480836 PLB1Q6P1J6 1458 aa22.88■■□□□ 1.25
PTPN7-212ENST00000480836 COL17A1Q9UMD9 1497 aaPredicted RBP22.87■■□□□ 1.25
PTPN7-212ENST00000480836 GLI2P10070 1586 aa22.87■■□□□ 1.25
PTPN7-212ENST00000480836 PRXQ9BXM0 1461 aa22.84■■□□□ 1.25
PTPN7-212ENST00000480836 EPRSP07814 1512 aaKnown RBP22.83■■□□□ 1.25
PTPN7-212ENST00000480836 ZCCHC11Q5TAX3 1644 aaKnown RBP22.82■■□□□ 1.24
PTPN7-212ENST00000480836 CTTNBP2Q8WZ74 1663 aa22.77■■□□□ 1.24
PTPN7-212ENST00000480836 MAP3K4Q9Y6R4 1608 aa22.75■■□□□ 1.23
PTPN7-212ENST00000480836 ABCA8O94911 1581 aa22.73■■□□□ 1.23
PTPN7-212ENST00000480836 P3H3Q8IVL6 736 aa22.72■■□□□ 1.23
PTPN7-212ENST00000480836 WDR7Q9Y4E6 1490 aa22.69■■□□□ 1.22
PTPN7-212ENST00000480836 KCNH8Q96L42 1107 aa22.69■■□□□ 1.22
PTPN7-212ENST00000480836 GOLGA3Q08378 1498 aa22.67■■□□□ 1.22
PTPN7-212ENST00000480836 ARID3CA6NKF2 412 aa22.67■■□□□ 1.22
PTPN7-212ENST00000480836 CSRNP3Q8WYN3 585 aa22.67■■□□□ 1.22
PTPN7-212ENST00000480836 ATP10BO94823 1461 aa22.6■■□□□ 1.21
PTPN7-212ENST00000480836 TEX14Q8IWB6 1497 aa22.6■■□□□ 1.21
PTPN7-212ENST00000480836 CD109Q6YHK3 1445 aa22.59■■□□□ 1.21
PTPN7-212ENST00000480836 ADGRL1O94910 1474 aa22.59■■□□□ 1.21
PTPN7-212ENST00000480836 MAGI3Q5TCQ9 1506 aa22.56■■□□□ 1.2
PTPN7-212ENST00000480836 FAM9AQ8IZU1 332 aaPredicted RBP22.54■■□□□ 1.2
PTPN7-212ENST00000480836 RANGAP1P46060 587 aaPredicted RBP22.53■■□□□ 1.2
PTPN7-212ENST00000480836 SAMD9Q5K651 1589 aa22.52■■□□□ 1.2
PTPN7-212ENST00000480836 CFAP43Q8NDM7 1665 aa22.52■■□□□ 1.2
PTPN7-212ENST00000480836 FHOD3Q2V2M9 1422 aa22.43■■□□□ 1.18
PTPN7-212ENST00000480836 NUP153P49790 1475 aaKnown RBP22.42■■□□□ 1.18
PTPN7-212ENST00000480836 RAPGEF6Q8TEU7 1601 aa22.42■■□□□ 1.18
PTPN7-212ENST00000480836 ARAP3Q8WWN8 1544 aa22.4■■□□□ 1.18
PTPN7-212ENST00000480836 EEA1Q15075 1411 aa22.39■■□□□ 1.17
PTPN7-212ENST00000480836 ABCA9Q8IUA7 1624 aa22.39■■□□□ 1.17
PTPN7-212ENST00000480836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.38■■□□□ 1.17
PTPN7-212ENST00000480836 RAPGEF3O95398 923 aa22.38■■□□□ 1.17
PTPN7-212ENST00000480836 HNRNPUL2Q1KMD3 747 aaKnown RBP22.38■■□□□ 1.17
PTPN7-212ENST00000480836 EHMT2Q96KQ7 1210 aa22.36■■□□□ 1.17
PTPN7-212ENST00000480836 KIF21BO75037 1637 aa22.34■■□□□ 1.17
PTPN7-212ENST00000480836 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
PTPN7-212ENST00000480836 HECW2Q9P2P5 1572 aa22.29■■□□□ 1.16
PTPN7-212ENST00000480836 FRMPD1Q5SYB0 1578 aa22.25■■□□□ 1.15
PTPN7-212ENST00000480836 PLEKHD1A6NEE1 506 aa22.25■■□□□ 1.15
PTPN7-212ENST00000480836 NEO1Q92859 1461 aa22.25■■□□□ 1.15
PTPN7-212ENST00000480836 PHLDB1Q86UU1 1377 aa22.25■■□□□ 1.15
PTPN7-212ENST00000480836 ILDR1Q86SU0 546 aaPredicted RBP22.24■■□□□ 1.15
PTPN7-212ENST00000480836 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.21■■□□□ 1.15
PTPN7-212ENST00000480836 CDK13Q14004 1512 aaKnown RBP22.21■■□□□ 1.15
PTPN7-212ENST00000480836 UBTFP17480 764 aaKnown RBP22.19■■□□□ 1.14
PTPN7-212ENST00000480836 EFCAB5A4FU69 1503 aa22.19■■□□□ 1.14
PTPN7-212ENST00000480836 ADAMTSL3P82987 1691 aa22.17■■□□□ 1.14
PTPN7-212ENST00000480836 TTC37Q6PGP7 1564 aa22.16■■□□□ 1.14
PTPN7-212ENST00000480836 AKNAQ7Z591 1439 aa22.16■■□□□ 1.14
PTPN7-212ENST00000480836 ARHGAP35Q9NRY4 1499 aa22.15■■□□□ 1.14
PTPN7-212ENST00000480836 FANCAO15360 1455 aa22.13■■□□□ 1.13
PTPN7-212ENST00000480836 PTPRMP28827 1452 aa22.13■■□□□ 1.13
PTPN7-212ENST00000480836 RICTORQ6R327 1708 aa22.11■■□□□ 1.13
PTPN7-212ENST00000480836 DENND4BO75064 1496 aaPredicted RBP22.11■■□□□ 1.13
PTPN7-212ENST00000480836 ATP1B4Q9UN42 357 aaPredicted RBP22.11■■□□□ 1.13
PTPN7-212ENST00000480836 SIGLEC1Q9BZZ2 1709 aa22.09■■□□□ 1.13
PTPN7-212ENST00000480836 BCORL1Q5H9F3 1711 aa22.09■■□□□ 1.13
PTPN7-212ENST00000480836 ARID4BQ4LE39 1312 aaPredicted RBP22.08■■□□□ 1.13
PTPN7-212ENST00000480836 YEATS2Q9ULM3 1422 aa22.08■■□□□ 1.13
PTPN7-212ENST00000480836 MADDQ8WXG6 1647 aa22.06■■□□□ 1.12
PTPN7-212ENST00000480836 PLCH2O75038 1416 aa22.06■■□□□ 1.12
PTPN7-212ENST00000480836 ARHGEF40Q8TER5 1519 aa22.03■■□□□ 1.12
PTPN7-212ENST00000480836 FMN1Q68DA7 1419 aa22.02■■□□□ 1.12
PTPN7-212ENST00000480836 SCAPERQ9BY12 1400 aa22.02■■□□□ 1.12
PTPN7-212ENST00000480836 LRRIQ1Q96JM4 1722 aa22.02■■□□□ 1.12
PTPN7-212ENST00000480836 KIF14Q15058 1648 aa22.01■■□□□ 1.11
PTPN7-212ENST00000480836 HECW1Q76N89 1606 aa22■■□□□ 1.11
PTPN7-212ENST00000480836 ZMYM4Q5VZL5 1548 aa22■■□□□ 1.11
PTPN7-212ENST00000480836 CFAP74Q9C0B2 1584 aa21.97■■□□□ 1.11
PTPN7-212ENST00000480836 RIMS1Q86UR5 1692 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms