RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 RUSC2Q8N2Y8 1516 aa32.9■■■□□ 2.86
ABCF3-214ENST00000480562 CUL7Q14999 1698 aa32.78■■■□□ 2.84
ABCF3-214ENST00000480562 KIAA0586Q9BVV6 1533 aa32.74■■■□□ 2.83
ABCF3-214ENST00000480562 CARMIL1Q5VZK9 1371 aa32.68■■■□□ 2.82
ABCF3-214ENST00000480562 KIF13AQ9H1H9 1805 aa32.58■■■□□ 2.81
ABCF3-214ENST00000480562 NPM1P06748 294 aaKnown RBP eCLIP32.58■■■□□ 2.81
ABCF3-214ENST00000480562 ADCY10Q96PN6 1610 aa32.56■■■□□ 2.8
ABCF3-214ENST00000480562 TTBK1Q5TCY1 1321 aaPredicted RBP32.49■■■□□ 2.79
ABCF3-214ENST00000480562 FAM69CQ0P6D2 419 aa32.48■■■□□ 2.79
ABCF3-214ENST00000480562 MAPKBP1O60336 1514 aa32.47■■■□□ 2.79
ABCF3-214ENST00000480562 ABCC10Q5T3U5 1492 aa32.47■■■□□ 2.79
ABCF3-214ENST00000480562 PTPRGP23470 1445 aa32.46■■■□□ 2.79
ABCF3-214ENST00000480562 IQGAP2Q13576 1575 aa32.43■■■□□ 2.78
ABCF3-214ENST00000480562 CARMIL2Q6F5E8 1435 aa32.42■■■□□ 2.78
ABCF3-214ENST00000480562 TNIKQ9UKE5 1360 aa32.39■■■□□ 2.78
ABCF3-214ENST00000480562 DIP2BQ9P265 1576 aa32.38■■■□□ 2.77
ABCF3-214ENST00000480562 AEBP2Q6ZN18 517 aaPredicted RBP32.38■■■□□ 2.77
ABCF3-214ENST00000480562 RAPGEF2Q9Y4G8 1499 aa32.37■■■□□ 2.77
ABCF3-214ENST00000480562 DISP1Q96F81 1524 aa32.3■■■□□ 2.76
ABCF3-214ENST00000480562 ABCC2Q92887 1545 aa32.26■■■□□ 2.75
ABCF3-214ENST00000480562 UGGT2Q9NYU1 1516 aa32.23■■■□□ 2.75
ABCF3-214ENST00000480562 UACAQ9BZF9 1416 aa32.2■■■□□ 2.75
ABCF3-214ENST00000480562 UHRF1BP1LA0JNW5 1464 aa32.19■■■□□ 2.74
ABCF3-214ENST00000480562 TSPOAP1O95153 1857 aa32.18■■■□□ 2.74
ABCF3-214ENST00000480562 ASXL2Q76L83 1435 aa32.16■■■□□ 2.74
ABCF3-214ENST00000480562 KIAA0556O60303 1618 aa32.15■■■□□ 2.74
ABCF3-214ENST00000480562 PLB1Q6P1J6 1458 aa32.11■■■□□ 2.73
ABCF3-214ENST00000480562 KDM6BO15054 1643 aa32.09■■■□□ 2.73
ABCF3-214ENST00000480562 CTTNBP2Q8WZ74 1663 aa32.08■■■□□ 2.73
ABCF3-214ENST00000480562 PRXQ9BXM0 1461 aa32.06■■■□□ 2.72
ABCF3-214ENST00000480562 KDM5BQ9UGL1 1544 aa32.05■■■□□ 2.72
ABCF3-214ENST00000480562 GLI2P10070 1586 aa32.02■■■□□ 2.72
ABCF3-214ENST00000480562 ZCCHC11Q5TAX3 1644 aaKnown RBP31.99■■■□□ 2.71
ABCF3-214ENST00000480562 GOLGA3Q08378 1498 aa31.97■■■□□ 2.71
ABCF3-214ENST00000480562 EPRSP07814 1512 aaKnown RBP31.95■■■□□ 2.71
ABCF3-214ENST00000480562 PPRC1Q5VV67 1664 aaKnown RBP31.95■■■□□ 2.7
ABCF3-214ENST00000480562 MAP3K4Q9Y6R4 1608 aa31.86■■■□□ 2.69
ABCF3-214ENST00000480562 ABCA8O94911 1581 aa31.85■■■□□ 2.69
ABCF3-214ENST00000480562 CSRNP3Q8WYN3 585 aa31.85■■■□□ 2.69
ABCF3-214ENST00000480562 WDR7Q9Y4E6 1490 aa31.84■■■□□ 2.69
ABCF3-214ENST00000480562 P3H3Q8IVL6 736 aa31.81■■■□□ 2.68
ABCF3-214ENST00000480562 KDM4FA0A1W2PPD8 638 aa31.8■■■□□ 2.68
ABCF3-214ENST00000480562 COL17A1Q9UMD9 1497 aaPredicted RBP31.78■■■□□ 2.68
ABCF3-214ENST00000480562 TEX14Q8IWB6 1497 aa31.76■■■□□ 2.67
ABCF3-214ENST00000480562 KCNH8Q96L42 1107 aa31.75■■■□□ 2.67
ABCF3-214ENST00000480562 ARID3CA6NKF2 412 aa31.71■■■□□ 2.67
ABCF3-214ENST00000480562 FAM9AQ8IZU1 332 aaPredicted RBP31.67■■■□□ 2.66
ABCF3-214ENST00000480562 EEA1Q15075 1411 aa31.66■■■□□ 2.66
ABCF3-214ENST00000480562 CD109Q6YHK3 1445 aa31.66■■■□□ 2.66
ABCF3-214ENST00000480562 SAMD9Q5K651 1589 aa31.64■■■□□ 2.65
ABCF3-214ENST00000480562 CFAP43Q8NDM7 1665 aa31.61■■■□□ 2.65
ABCF3-214ENST00000480562 ATP10BO94823 1461 aa31.61■■■□□ 2.65
ABCF3-214ENST00000480562 RANGAP1P46060 587 aaPredicted RBP31.61■■■□□ 2.65
ABCF3-214ENST00000480562 MAGI3Q5TCQ9 1506 aa31.59■■■□□ 2.65
ABCF3-214ENST00000480562 ADGRL1O94910 1474 aa31.53■■■□□ 2.64
ABCF3-214ENST00000480562 RAPGEF6Q8TEU7 1601 aa31.52■■■□□ 2.64
ABCF3-214ENST00000480562 FHOD3Q2V2M9 1422 aa31.49■■■□□ 2.63
ABCF3-214ENST00000480562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.47■■■□□ 2.63
ABCF3-214ENST00000480562 HNRNPUL2Q1KMD3 747 aaKnown RBP31.47■■■□□ 2.63
ABCF3-214ENST00000480562 NUP153P49790 1475 aaKnown RBP31.43■■■□□ 2.62
ABCF3-214ENST00000480562 KIF21BO75037 1637 aa31.42■■■□□ 2.62
ABCF3-214ENST00000480562 ABCA9Q8IUA7 1624 aa31.4■■■□□ 2.62
ABCF3-214ENST00000480562 EHMT2Q96KQ7 1210 aa31.37■■■□□ 2.61
ABCF3-214ENST00000480562 ARAP3Q8WWN8 1544 aa31.35■■■□□ 2.61
ABCF3-214ENST00000480562 CHIC1Q5VXU3 224 aa31.34■■■□□ 2.61
ABCF3-214ENST00000480562 EFCAB5A4FU69 1503 aa31.32■■■□□ 2.6
ABCF3-214ENST00000480562 UBTFP17480 764 aaKnown RBP31.27■■■□□ 2.6
ABCF3-214ENST00000480562 PHLDB1Q86UU1 1377 aa31.27■■■□□ 2.6
ABCF3-214ENST00000480562 PLEKHD1A6NEE1 506 aa31.26■■■□□ 2.59
ABCF3-214ENST00000480562 RAPGEF3O95398 923 aa31.24■■■□□ 2.59
ABCF3-214ENST00000480562 NEO1Q92859 1461 aa31.23■■■□□ 2.59
ABCF3-214ENST00000480562 CDK13Q14004 1512 aaKnown RBP31.14■■■□□ 2.58
ABCF3-214ENST00000480562 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.12■■■□□ 2.57
ABCF3-214ENST00000480562 FRMPD1Q5SYB0 1578 aa31.11■■■□□ 2.57
ABCF3-214ENST00000480562 ATP1B4Q9UN42 357 aaPredicted RBP31.11■■■□□ 2.57
ABCF3-214ENST00000480562 ARHGAP35Q9NRY4 1499 aa31.1■■■□□ 2.57
ABCF3-214ENST00000480562 TTC37Q6PGP7 1564 aa31.08■■■□□ 2.57
ABCF3-214ENST00000480562 HECW2Q9P2P5 1572 aa31.08■■■□□ 2.57
ABCF3-214ENST00000480562 FANCAO15360 1455 aa31.06■■■□□ 2.56
ABCF3-214ENST00000480562 FMN1Q68DA7 1419 aa31.06■■■□□ 2.56
ABCF3-214ENST00000480562 AKNAQ7Z591 1439 aa31.06■■■□□ 2.56
ABCF3-214ENST00000480562 DENND4BO75064 1496 aaPredicted RBP31.03■■■□□ 2.56
ABCF3-214ENST00000480562 HECW1Q76N89 1606 aa31■■■□□ 2.55
ABCF3-214ENST00000480562 CFAP74Q9C0B2 1584 aa31■■■□□ 2.55
ABCF3-214ENST00000480562 RICTORQ6R327 1708 aa30.98■■■□□ 2.55
ABCF3-214ENST00000480562 ARID4BQ4LE39 1312 aaPredicted RBP30.98■■■□□ 2.55
ABCF3-214ENST00000480562 ADAMTSL3P82987 1691 aa30.97■■■□□ 2.55
ABCF3-214ENST00000480562 ARHGEF40Q8TER5 1519 aa30.93■■■□□ 2.54
ABCF3-214ENST00000480562 PLCH2O75038 1416 aa30.92■■■□□ 2.54
ABCF3-214ENST00000480562 PTPRMP28827 1452 aa30.91■■■□□ 2.54
ABCF3-214ENST00000480562 CDK11AQ9UQ88 783 aaPredicted RBP30.91■■■□□ 2.54
ABCF3-214ENST00000480562 BCORL1Q5H9F3 1711 aa30.9■■■□□ 2.54
ABCF3-214ENST00000480562 ZMYM4Q5VZL5 1548 aa30.87■■■□□ 2.53
ABCF3-214ENST00000480562 SCAPERQ9BY12 1400 aa30.86■■■□□ 2.53
ABCF3-214ENST00000480562 KIF14Q15058 1648 aa30.86■■■□□ 2.53
ABCF3-214ENST00000480562 MADDQ8WXG6 1647 aa30.85■■■□□ 2.53
ABCF3-214ENST00000480562 YEATS2Q9ULM3 1422 aa30.85■■■□□ 2.53
ABCF3-214ENST00000480562 TROQ12816 1431 aaPredicted RBP30.83■■■□□ 2.53
ABCF3-214ENST00000480562 LRRIQ1Q96JM4 1722 aa30.83■■■□□ 2.53
ABCF3-214ENST00000480562 ZFYVE16Q7Z3T8 1539 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms