RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 IGF1RP08069 1367 aa16.22■□□□□ 0.19
CHD6-208ENST00000480022 EEA1Q15075 1411 aa16.21■□□□□ 0.18
CHD6-208ENST00000480022 ERICH3Q5RHP9 1530 aa16.2■□□□□ 0.18
CHD6-208ENST00000480022 SNAPC4Q5SXM2 1469 aa16.18■□□□□ 0.18
CHD6-208ENST00000480022 PBRM1Q86U86 1689 aa16.18■□□□□ 0.18
CHD6-208ENST00000480022 CSRNP3Q8WYN3 585 aa16.17■□□□□ 0.18
CHD6-208ENST00000480022 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
CHD6-208ENST00000480022 MAGI1Q96QZ7 1491 aaPredicted RBP16.15■□□□□ 0.18
CHD6-208ENST00000480022 CARMIL1Q5VZK9 1371 aa16.12■□□□□ 0.17
CHD6-208ENST00000480022 FHAD1B1AJZ9 1412 aa16.11■□□□□ 0.17
CHD6-208ENST00000480022 ADAMTS12P58397 1594 aa16.11■□□□□ 0.17
CHD6-208ENST00000480022 PRXQ9BXM0 1461 aa16.09■□□□□ 0.17
CHD6-208ENST00000480022 CUL7Q14999 1698 aa16.09■□□□□ 0.17
CHD6-208ENST00000480022 SYNJ2O15056 1496 aa16.09■□□□□ 0.17
CHD6-208ENST00000480022 CLSPNQ9HAW4 1339 aa16.08■□□□□ 0.17
CHD6-208ENST00000480022 FBLN2P98095 1184 aa16.08■□□□□ 0.16
CHD6-208ENST00000480022 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
CHD6-208ENST00000480022 MIER1Q8N108 512 aa16.05■□□□□ 0.16
CHD6-208ENST00000480022 RAPGEF2Q9Y4G8 1499 aa16.05■□□□□ 0.16
CHD6-208ENST00000480022 TSHZ2Q9NRE2 1034 aa16.04■□□□□ 0.16
CHD6-208ENST00000480022 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
CHD6-208ENST00000480022 SUPT16HQ9Y5B9 1047 aaKnown RBP16■□□□□ 0.15
CHD6-208ENST00000480022 EHMT2Q96KQ7 1210 aa16■□□□□ 0.15
CHD6-208ENST00000480022 KIF21BO75037 1637 aa16■□□□□ 0.15
CHD6-208ENST00000480022 CHD1O14646 1710 aa15.99■□□□□ 0.15
CHD6-208ENST00000480022 GOLGA3Q08378 1498 aa15.95■□□□□ 0.14
CHD6-208ENST00000480022 NUP160Q12769 1436 aa15.95■□□□□ 0.14
CHD6-208ENST00000480022 OSCARQ8IYS5 282 aa15.94■□□□□ 0.14
CHD6-208ENST00000480022 CEP170Q5SW79 1584 aa15.93■□□□□ 0.14
CHD6-208ENST00000480022 UBTFP17480 764 aaKnown RBP15.91■□□□□ 0.14
CHD6-208ENST00000480022 KIAA0586Q9BVV6 1533 aa15.87■□□□□ 0.13
CHD6-208ENST00000480022 CLASP1Q7Z460 1538 aa15.86■□□□□ 0.13
CHD6-208ENST00000480022 TNIKQ9UKE5 1360 aa15.83■□□□□ 0.12
CHD6-208ENST00000480022 IQGAP2Q13576 1575 aa15.82■□□□□ 0.12
CHD6-208ENST00000480022 CTTNBP2Q8WZ74 1663 aa15.81■□□□□ 0.12
CHD6-208ENST00000480022 JPH4Q96JJ6 628 aa15.81■□□□□ 0.12
CHD6-208ENST00000480022 RANGAP1P46060 587 aaPredicted RBP15.78■□□□□ 0.12
CHD6-208ENST00000480022 SHROOM2Q13796 1616 aa15.75■□□□□ 0.11
CHD6-208ENST00000480022 UGGT2Q9NYU1 1516 aa15.75■□□□□ 0.11
CHD6-208ENST00000480022 PRG4Q92954 1404 aaPredicted RBP15.74■□□□□ 0.11
CHD6-208ENST00000480022 DISP1Q96F81 1524 aa15.71■□□□□ 0.11
CHD6-208ENST00000480022 CEP162Q5TB80 1403 aa15.71■□□□□ 0.11
CHD6-208ENST00000480022 ERCC6L2Q5T890 1561 aa15.7■□□□□ 0.1
CHD6-208ENST00000480022 CLIP1P30622 1438 aa15.69■□□□□ 0.1
CHD6-208ENST00000480022 CARMIL2Q6F5E8 1435 aa15.69■□□□□ 0.1
CHD6-208ENST00000480022 P3H3Q8IVL6 736 aa15.68■□□□□ 0.1
CHD6-208ENST00000480022 ARHGAP35Q9NRY4 1499 aa15.68■□□□□ 0.1
CHD6-208ENST00000480022 SAMD9Q5K651 1589 aa15.67■□□□□ 0.1
CHD6-208ENST00000480022 KIAA0556O60303 1618 aa15.67■□□□□ 0.1
CHD6-208ENST00000480022 EFCAB5A4FU69 1503 aa15.66■□□□□ 0.1
CHD6-208ENST00000480022 ARHGEF11O15085 1522 aa15.66■□□□□ 0.1
CHD6-208ENST00000480022 DNAJC5Q9H3Z4 198 aa15.65■□□□□ 0.1
CHD6-208ENST00000480022 FHOD3Q2V2M9 1422 aa15.64■□□□□ 0.09
CHD6-208ENST00000480022 RBM19Q9Y4C8 960 aaKnown RBP15.62■□□□□ 0.09
CHD6-208ENST00000480022 ARAP1Q96P48 1450 aa15.61■□□□□ 0.09
CHD6-208ENST00000480022 RIMBP3CA6NJZ7 1639 aa15.61■□□□□ 0.09
CHD6-208ENST00000480022 RIMBP3BA6NNM3 1639 aa15.61■□□□□ 0.09
CHD6-208ENST00000480022 RIMBP3Q9UFD9 1639 aa15.61■□□□□ 0.09
CHD6-208ENST00000480022 EIF5BO60841 1220 aaKnown RBP15.6■□□□□ 0.09
CHD6-208ENST00000480022 PTPRGP23470 1445 aa15.6■□□□□ 0.09
CHD6-208ENST00000480022 BCANQ96GW7 911 aa15.55■□□□□ 0.08
CHD6-208ENST00000480022 FMN1Q68DA7 1419 aa15.53■□□□□ 0.08
CHD6-208ENST00000480022 CYB5RLQ6IPT4 315 aa15.53■□□□□ 0.08
CHD6-208ENST00000480022 PLB1Q6P1J6 1458 aa15.52■□□□□ 0.07
CHD6-208ENST00000480022 MSH5O43196 834 aa15.5■□□□□ 0.07
CHD6-208ENST00000480022 UACAQ9BZF9 1416 aa15.49■□□□□ 0.07
CHD6-208ENST00000480022 FKBP8Q14318 412 aa15.49■□□□□ 0.07
CHD6-208ENST00000480022 VPS8Q8N3P4 1428 aa15.49■□□□□ 0.07
CHD6-208ENST00000480022 MYT1LQ9UL68 1186 aa15.49■□□□□ 0.07
CHD6-208ENST00000480022 ABCA8O94911 1581 aa15.48■□□□□ 0.07
CHD6-208ENST00000480022 CASKIN1Q8WXD9 1431 aa15.46■□□□□ 0.07
CHD6-208ENST00000480022 RAPGEF6Q8TEU7 1601 aa15.45■□□□□ 0.06
CHD6-208ENST00000480022 UHRF1BP1LA0JNW5 1464 aa15.45■□□□□ 0.06
CHD6-208ENST00000480022 ABCC2Q92887 1545 aa15.45■□□□□ 0.06
CHD6-208ENST00000480022 HNRNPUL2Q1KMD3 747 aaKnown RBP15.44■□□□□ 0.06
CHD6-208ENST00000480022 ATP1B4Q9UN42 357 aaPredicted RBP15.44■□□□□ 0.06
CHD6-208ENST00000480022 PCF11O94913 1555 aaKnown RBP15.44■□□□□ 0.06
CHD6-208ENST00000480022 NUP153P49790 1475 aaKnown RBP15.43■□□□□ 0.06
CHD6-208ENST00000480022 ADCY10Q96PN6 1610 aa15.43■□□□□ 0.06
CHD6-208ENST00000480022 FYCO1Q9BQS8 1478 aa15.43■□□□□ 0.06
CHD6-208ENST00000480022 ARID3CA6NKF2 412 aa15.42■□□□□ 0.06
CHD6-208ENST00000480022 NCBP3Q53F19 620 aaKnown RBP15.42■□□□□ 0.06
CHD6-208ENST00000480022 FANCIQ9NVI1 1328 aa15.41■□□□□ 0.06
CHD6-208ENST00000480022 HECW1Q76N89 1606 aa15.4■□□□□ 0.06
CHD6-208ENST00000480022 NEFLP07196 543 aa15.39■□□□□ 0.06
CHD6-208ENST00000480022 ATP10BO94823 1461 aa15.38■□□□□ 0.05
CHD6-208ENST00000480022 KDM5BQ9UGL1 1544 aa15.38■□□□□ 0.05
CHD6-208ENST00000480022 ANO8Q9HCE9 1232 aaPredicted RBP15.38■□□□□ 0.05
CHD6-208ENST00000480022 EPRSP07814 1512 aaKnown RBP15.38■□□□□ 0.05
CHD6-208ENST00000480022 DEKP35659 375 aaKnown RBP15.36■□□□□ 0.05
CHD6-208ENST00000480022 CDK13Q14004 1512 aaKnown RBP15.36■□□□□ 0.05
CHD6-208ENST00000480022 NPM1P06748 294 aaKnown RBP eCLIP15.35■□□□□ 0.05
CHD6-208ENST00000480022 CCDC18Q5T9S5 1454 aa15.34■□□□□ 0.05
CHD6-208ENST00000480022 ZCCHC11Q5TAX3 1644 aaKnown RBP15.33■□□□□ 0.04
CHD6-208ENST00000480022 LRRIQ1Q96JM4 1722 aa15.33■□□□□ 0.04
CHD6-208ENST00000480022 ITGAEP38570 1179 aa15.31■□□□□ 0.04
CHD6-208ENST00000480022 KCNH8Q96L42 1107 aa15.31■□□□□ 0.04
CHD6-208ENST00000480022 MAP3K1Q13233 1512 aa15.29■□□□□ 0.04
CHD6-208ENST00000480022 TIAM1Q13009 1591 aa15.28■□□□□ 0.04
CHD6-208ENST00000480022 ASXL2Q76L83 1435 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms