RNA–Protein interactions for RNA: ENST00000478264.1

PLOD3-213, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-213ENST00000478264 GOLGA3Q08378 1498 aa29.91■■■□□ 2.38
PLOD3-213ENST00000478264 CTTNBP2Q8WZ74 1663 aa29.88■■■□□ 2.37
PLOD3-213ENST00000478264 IQGAP2Q13576 1575 aa29.86■■■□□ 2.37
PLOD3-213ENST00000478264 SHROOM2Q13796 1616 aa29.84■■■□□ 2.37
PLOD3-213ENST00000478264 JPH4Q96JJ6 628 aa29.75■■■□□ 2.35
PLOD3-213ENST00000478264 EHMT2Q96KQ7 1210 aa29.74■■■□□ 2.35
PLOD3-213ENST00000478264 ARHGEF11O15085 1522 aa29.74■■■□□ 2.35
PLOD3-213ENST00000478264 UBTFP17480 764 aaKnown RBP29.71■■■□□ 2.35
PLOD3-213ENST00000478264 UGGT2Q9NYU1 1516 aa29.7■■■□□ 2.34
PLOD3-213ENST00000478264 PRG4Q92954 1404 aaPredicted RBP29.69■■■□□ 2.34
PLOD3-213ENST00000478264 RIMBP3CA6NJZ7 1639 aa29.68■■■□□ 2.34
PLOD3-213ENST00000478264 RIMBP3BA6NNM3 1639 aa29.68■■■□□ 2.34
PLOD3-213ENST00000478264 RIMBP3Q9UFD9 1639 aa29.68■■■□□ 2.34
PLOD3-213ENST00000478264 ERCC6L2Q5T890 1561 aa29.64■■■□□ 2.33
PLOD3-213ENST00000478264 CARMIL2Q6F5E8 1435 aa29.61■■■□□ 2.33
PLOD3-213ENST00000478264 DISP1Q96F81 1524 aa29.59■■■□□ 2.33
PLOD3-213ENST00000478264 TNIKQ9UKE5 1360 aa29.58■■■□□ 2.33
PLOD3-213ENST00000478264 KIAA0556O60303 1618 aa29.57■■■□□ 2.32
PLOD3-213ENST00000478264 SAMD9Q5K651 1589 aa29.53■■■□□ 2.32
PLOD3-213ENST00000478264 ARAP1Q96P48 1450 aa29.53■■■□□ 2.32
PLOD3-213ENST00000478264 EFCAB5A4FU69 1503 aa29.5■■■□□ 2.31
PLOD3-213ENST00000478264 LOC105371045A0A1W2PR82 267 aa29.48■■■□□ 2.31
PLOD3-213ENST00000478264 RANGAP1P46060 587 aaPredicted RBP29.45■■■□□ 2.31
PLOD3-213ENST00000478264 PTPRGP23470 1445 aa29.38■■■□□ 2.29
PLOD3-213ENST00000478264 ARHGAP35Q9NRY4 1499 aa29.38■■■□□ 2.29
PLOD3-213ENST00000478264 CYB5RLQ6IPT4 315 aa29.36■■■□□ 2.29
PLOD3-213ENST00000478264 CLIP1P30622 1438 aa29.35■■■□□ 2.29
PLOD3-213ENST00000478264 P3H3Q8IVL6 736 aa29.34■■■□□ 2.29
PLOD3-213ENST00000478264 FHOD3Q2V2M9 1422 aa29.34■■■□□ 2.29
PLOD3-213ENST00000478264 CEP162Q5TB80 1403 aa29.34■■■□□ 2.29
PLOD3-213ENST00000478264 TTBK1Q5TCY1 1321 aaPredicted RBP29.3■■■□□ 2.28
PLOD3-213ENST00000478264 UACAQ9BZF9 1416 aa29.23■■■□□ 2.27
PLOD3-213ENST00000478264 UHRF1BP1LA0JNW5 1464 aa29.2■■■□□ 2.26
PLOD3-213ENST00000478264 ABCA8O94911 1581 aa29.2■■■□□ 2.26
PLOD3-213ENST00000478264 ADCY10Q96PN6 1610 aa29.2■■■□□ 2.26
PLOD3-213ENST00000478264 ABCC2Q92887 1545 aa29.2■■■□□ 2.26
PLOD3-213ENST00000478264 FMN1Q68DA7 1419 aa29.2■■■□□ 2.26
PLOD3-213ENST00000478264 PLB1Q6P1J6 1458 aa29.19■■■□□ 2.26
PLOD3-213ENST00000478264 RAPGEF6Q8TEU7 1601 aa29.14■■■□□ 2.26
PLOD3-213ENST00000478264 KDM5BQ9UGL1 1544 aa29.04■■■□□ 2.24
PLOD3-213ENST00000478264 HECW1Q76N89 1606 aa29.03■■■□□ 2.24
PLOD3-213ENST00000478264 PCF11O94913 1555 aaKnown RBP29.03■■■□□ 2.24
PLOD3-213ENST00000478264 NUP153P49790 1475 aaKnown RBP29.03■■■□□ 2.24
PLOD3-213ENST00000478264 NPM1P06748 294 aaKnown RBP eCLIP29.01■■■□□ 2.23
PLOD3-213ENST00000478264 CASKIN1Q8WXD9 1431 aa29.01■■■□□ 2.23
PLOD3-213ENST00000478264 FYCO1Q9BQS8 1478 aa28.99■■■□□ 2.23
PLOD3-213ENST00000478264 ZCCHC11Q5TAX3 1644 aaKnown RBP28.99■■■□□ 2.23
PLOD3-213ENST00000478264 VPS8Q8N3P4 1428 aa28.97■■■□□ 2.23
PLOD3-213ENST00000478264 MAPKBP1O60336 1514 aa28.95■■■□□ 2.23
PLOD3-213ENST00000478264 ATP10BO94823 1461 aa28.93■■■□□ 2.22
PLOD3-213ENST00000478264 ATP1B4Q9UN42 357 aaPredicted RBP28.9■■■□□ 2.22
PLOD3-213ENST00000478264 EPRSP07814 1512 aaKnown RBP28.89■■■□□ 2.22
PLOD3-213ENST00000478264 ARID3CA6NKF2 412 aa28.88■■■□□ 2.21
PLOD3-213ENST00000478264 CCDC18Q5T9S5 1454 aa28.88■■■□□ 2.21
PLOD3-213ENST00000478264 CDK13Q14004 1512 aaKnown RBP28.86■■■□□ 2.21
PLOD3-213ENST00000478264 LRRIQ1Q96JM4 1722 aa28.85■■■□□ 2.21
PLOD3-213ENST00000478264 ASXL2Q76L83 1435 aa28.85■■■□□ 2.21
PLOD3-213ENST00000478264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.82■■■□□ 2.2
PLOD3-213ENST00000478264 HNRNPUL2Q1KMD3 747 aaKnown RBP28.82■■■□□ 2.2
PLOD3-213ENST00000478264 WDR7Q9Y4E6 1490 aa28.8■■■□□ 2.2
PLOD3-213ENST00000478264 ABCC10Q5T3U5 1492 aa28.73■■■□□ 2.19
PLOD3-213ENST00000478264 DIP2BQ9P265 1576 aa28.72■■■□□ 2.19
PLOD3-213ENST00000478264 CDK11AQ9UQ88 783 aaPredicted RBP28.72■■■□□ 2.19
PLOD3-213ENST00000478264 CFAP43Q8NDM7 1665 aa28.71■■■□□ 2.19
PLOD3-213ENST00000478264 PLEKHD1A6NEE1 506 aa28.71■■■□□ 2.19
PLOD3-213ENST00000478264 TIAM1Q13009 1591 aa28.68■■■□□ 2.18
PLOD3-213ENST00000478264 MAP3K1Q13233 1512 aa28.67■■■□□ 2.18
PLOD3-213ENST00000478264 TROQ12816 1431 aaPredicted RBP28.65■■■□□ 2.18
PLOD3-213ENST00000478264 GLI2P10070 1586 aa28.65■■■□□ 2.18
PLOD3-213ENST00000478264 KIF13AQ9H1H9 1805 aa28.64■■■□□ 2.18
PLOD3-213ENST00000478264 MAGI3Q5TCQ9 1506 aa28.63■■■□□ 2.17
PLOD3-213ENST00000478264 TRHP20396 242 aaPredicted RBP28.62■■■□□ 2.17
PLOD3-213ENST00000478264 FAM69CQ0P6D2 419 aa28.6■■■□□ 2.17
PLOD3-213ENST00000478264 KCNH8Q96L42 1107 aa28.6■■■□□ 2.17
PLOD3-213ENST00000478264 EHBP1L1Q8N3D4 1523 aa28.59■■■□□ 2.17
PLOD3-213ENST00000478264 APLP2Q06481 763 aa28.59■■■□□ 2.17
PLOD3-213ENST00000478264 KIF14Q15058 1648 aa28.58■■■□□ 2.17
PLOD3-213ENST00000478264 MTUS2Q5JR59 1369 aa28.58■■■□□ 2.17
PLOD3-213ENST00000478264 ABCA9Q8IUA7 1624 aa28.56■■■□□ 2.16
PLOD3-213ENST00000478264 MAP3K4Q9Y6R4 1608 aa28.54■■■□□ 2.16
PLOD3-213ENST00000478264 LRRC9Q6ZRR7 1453 aa28.53■■■□□ 2.16
PLOD3-213ENST00000478264 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.52■■■□□ 2.16
PLOD3-213ENST00000478264 TTC37Q6PGP7 1564 aa28.5■■■□□ 2.15
PLOD3-213ENST00000478264 CD109Q6YHK3 1445 aa28.46■■■□□ 2.15
PLOD3-213ENST00000478264 SUPT6HQ7KZ85 1726 aaKnown RBP28.44■■■□□ 2.14
PLOD3-213ENST00000478264 KANK4Q5T7N3 995 aaPredicted RBP28.44■■■□□ 2.14
PLOD3-213ENST00000478264 PPRC1Q5VV67 1664 aaKnown RBP28.4■■■□□ 2.14
PLOD3-213ENST00000478264 TSPOAP1O95153 1857 aa28.4■■■□□ 2.14
PLOD3-213ENST00000478264 MYO5CQ9NQX4 1742 aa28.39■■■□□ 2.14
PLOD3-213ENST00000478264 NCOA2Q15596 1464 aa28.38■■■□□ 2.13
PLOD3-213ENST00000478264 TEX14Q8IWB6 1497 aa28.38■■■□□ 2.13
PLOD3-213ENST00000478264 ARAP3Q8WWN8 1544 aa28.36■■■□□ 2.13
PLOD3-213ENST00000478264 PLCH2O75038 1416 aa28.35■■■□□ 2.13
PLOD3-213ENST00000478264 PREX2Q70Z35 1606 aa28.34■■■□□ 2.13
PLOD3-213ENST00000478264 CCNB3Q8WWL7 1395 aa28.32■■■□□ 2.12
PLOD3-213ENST00000478264 CDC42BPAQ5VT25 1732 aa28.32■■■□□ 2.12
PLOD3-213ENST00000478264 ITSN2Q9NZM3 1697 aa28.3■■■□□ 2.12
PLOD3-213ENST00000478264 GPATCH8Q9UKJ3 1502 aaKnown RBP28.3■■■□□ 2.12
PLOD3-213ENST00000478264 CFAP74Q9C0B2 1584 aa28.29■■■□□ 2.12
PLOD3-213ENST00000478264 ARHGAP5Q13017 1502 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms