RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 ABCA10Q8WWZ4 1543 aa7.69□□□□□ -1.18
POLR2B-208ENST00000478188 AQRO60306 1485 aaKnown RBP eCLIP7.67□□□□□ -1.188e-9■■■■□ 22.5
POLR2B-208ENST00000478188 SLC4A2P04920 1241 aa7.66□□□□□ -1.18
POLR2B-208ENST00000478188 SOGA1O94964 1423 aa7.66□□□□□ -1.18
POLR2B-208ENST00000478188 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.66□□□□□ -1.18
POLR2B-208ENST00000478188 HNRNPUL2Q1KMD3 747 aaKnown RBP7.66□□□□□ -1.18
POLR2B-208ENST00000478188 CLASP1Q7Z460 1538 aa7.65□□□□□ -1.19
POLR2B-208ENST00000478188 WRNQ14191 1432 aaPredicted RBP eCLIP7.65□□□□□ -1.19
POLR2B-208ENST00000478188 SPINK5Q9NQ38 1064 aaPredicted RBP7.65□□□□□ -1.19
POLR2B-208ENST00000478188 ADAMTS12P58397 1594 aa7.64□□□□□ -1.19
POLR2B-208ENST00000478188 ERCC6L2Q5T890 1561 aa7.64□□□□□ -1.19
POLR2B-208ENST00000478188 SNAPC4Q5SXM2 1469 aa7.63□□□□□ -1.19
POLR2B-208ENST00000478188 MAGI1Q96QZ7 1491 aaPredicted RBP7.63□□□□□ -1.19
POLR2B-208ENST00000478188 OSCARQ8IYS5 282 aa7.63□□□□□ -1.19
POLR2B-208ENST00000478188 GRIN2BQ13224 1484 aa7.62□□□□□ -1.19
POLR2B-208ENST00000478188 DSG3P32926 999 aa7.61□□□□□ -1.19
POLR2B-208ENST00000478188 GAPVD1Q14C86 1478 aa7.61□□□□□ -1.19
POLR2B-208ENST00000478188 TDRD9Q8NDG6 1382 aaKnown RBP7.6□□□□□ -1.19
POLR2B-208ENST00000478188 ERICH3Q5RHP9 1530 aa7.6□□□□□ -1.19
POLR2B-208ENST00000478188 SLC4A1APQ9BWU0 796 aaKnown RBP7.6□□□□□ -1.19
POLR2B-208ENST00000478188 SYNJ2O15056 1496 aa7.59□□□□□ -1.19
POLR2B-208ENST00000478188 SAMD1Q6SPF0 538 aaPredicted RBP7.59□□□□□ -1.19
POLR2B-208ENST00000478188 ZNF219Q9P2Y4 722 aaPredicted RBP7.58□□□□□ -1.2
POLR2B-208ENST00000478188 ILDR1Q86SU0 546 aaPredicted RBP7.58□□□□□ -1.2
POLR2B-208ENST00000478188 SHROOM2Q13796 1616 aa7.58□□□□□ -1.2
POLR2B-208ENST00000478188 CEP170Q5SW79 1584 aa7.58□□□□□ -1.2
POLR2B-208ENST00000478188 TRHP20396 242 aaPredicted RBP7.57□□□□□ -1.2
POLR2B-208ENST00000478188 ARAP1Q96P48 1450 aa7.56□□□□□ -1.2
POLR2B-208ENST00000478188 NUP160Q12769 1436 aa7.55□□□□□ -1.2
POLR2B-208ENST00000478188 GRIN2AQ12879 1464 aa7.55□□□□□ -1.2
POLR2B-208ENST00000478188 CUL7Q14999 1698 aa7.54□□□□□ -1.2
POLR2B-208ENST00000478188 RUSC2Q8N2Y8 1516 aa7.54□□□□□ -1.2
POLR2B-208ENST00000478188 FHAD1B1AJZ9 1412 aa7.52□□□□□ -1.21
POLR2B-208ENST00000478188 MYCNP04198 464 aaPredicted RBP7.5□□□□□ -1.21
POLR2B-208ENST00000478188 ABCB7O75027 752 aa7.48□□□□□ -1.21
POLR2B-208ENST00000478188 IGF1RP08069 1367 aa7.47□□□□□ -1.21
POLR2B-208ENST00000478188 KIF27Q86VH2 1401 aa7.46□□□□□ -1.22
POLR2B-208ENST00000478188 CTTNBP2Q8WZ74 1663 aa7.43□□□□□ -1.22
POLR2B-208ENST00000478188 CHMP7Q8WUX9 453 aaPredicted RBP7.43□□□□□ -1.22
POLR2B-208ENST00000478188 KIF13AQ9H1H9 1805 aa7.42□□□□□ -1.22
POLR2B-208ENST00000478188 KIAA0586Q9BVV6 1533 aa7.41□□□□□ -1.22
POLR2B-208ENST00000478188 FOXD4L1Q9NU39 408 aa7.41□□□□□ -1.22
POLR2B-208ENST00000478188 PRXQ9BXM0 1461 aa7.4□□□□□ -1.22
POLR2B-208ENST00000478188 FBLN2P98095 1184 aa7.4□□□□□ -1.23
POLR2B-208ENST00000478188 EHMT2Q96KQ7 1210 aa7.4□□□□□ -1.23
POLR2B-208ENST00000478188 IQGAP2Q13576 1575 aa7.39□□□□□ -1.23
POLR2B-208ENST00000478188 ADCY10Q96PN6 1610 aa7.39□□□□□ -1.23
POLR2B-208ENST00000478188 UGGT2Q9NYU1 1516 aa7.38□□□□□ -1.23
POLR2B-208ENST00000478188 CARMIL1Q5VZK9 1371 aa7.38□□□□□ -1.23
POLR2B-208ENST00000478188 DISP1Q96F81 1524 aa7.38□□□□□ -1.23
POLR2B-208ENST00000478188 RAPGEF2Q9Y4G8 1499 aa7.38□□□□□ -1.23
POLR2B-208ENST00000478188 PRG4Q92954 1404 aaPredicted RBP7.36□□□□□ -1.23
POLR2B-208ENST00000478188 KIAA0556O60303 1618 aa7.36□□□□□ -1.23
POLR2B-208ENST00000478188 POLA2Q14181 598 aa7.35□□□□□ -1.23
POLR2B-208ENST00000478188 RBM42Q9BTD8 480 aaKnown RBP7.35□□□□□ -1.23
POLR2B-208ENST00000478188 KIF21BO75037 1637 aa7.35□□□□□ -1.23
POLR2B-208ENST00000478188 SAMD9Q5K651 1589 aa7.34□□□□□ -1.23
POLR2B-208ENST00000478188 ZBTB22O15209 634 aa7.34□□□□□ -1.23
POLR2B-208ENST00000478188 FBXO41Q8TF61 875 aa7.34□□□□□ -1.23
POLR2B-208ENST00000478188 MAPKBP1O60336 1514 aa7.33□□□□□ -1.24
POLR2B-208ENST00000478188 CYB5RLQ6IPT4 315 aa7.32□□□□□ -1.24
POLR2B-208ENST00000478188 HECW2Q9P2P5 1572 aa7.32□□□□□ -1.24
POLR2B-208ENST00000478188 JPH4Q96JJ6 628 aa7.31□□□□□ -1.24
POLR2B-208ENST00000478188 EEA1Q15075 1411 aa7.31□□□□□ -1.24
POLR2B-208ENST00000478188 CSRNP3Q8WYN3 585 aa7.31□□□□□ -1.24
POLR2B-208ENST00000478188 UHRF1BP1LA0JNW5 1464 aa7.31□□□□□ -1.24
POLR2B-208ENST00000478188 POTEHQ6S545 545 aa7.31□□□□□ -1.24
POLR2B-208ENST00000478188 DIP2BQ9P265 1576 aa7.3□□□□□ -1.24
POLR2B-208ENST00000478188 SOCS7O14512 581 aa7.3□□□□□ -1.24
POLR2B-208ENST00000478188 ABCA8O94911 1581 aa7.3□□□□□ -1.24
POLR2B-208ENST00000478188 PPRC1Q5VV67 1664 aaKnown RBP7.29□□□□□ -1.24
POLR2B-208ENST00000478188 ABCC2Q92887 1545 aa7.29□□□□□ -1.24
POLR2B-208ENST00000478188 ZCCHC11Q5TAX3 1644 aaKnown RBP7.28□□□□□ -1.24
POLR2B-208ENST00000478188 ZBTB12Q9Y330 459 aaPredicted RBP7.27□□□□□ -1.25
POLR2B-208ENST00000478188 TNIKQ9UKE5 1360 aa7.27□□□□□ -1.25
POLR2B-208ENST00000478188 KDM5BQ9UGL1 1544 aa7.27□□□□□ -1.25
POLR2B-208ENST00000478188 LMTK3Q96Q04 1460 aa7.26□□□□□ -1.25
POLR2B-208ENST00000478188 GLI2P10070 1586 aa7.25□□□□□ -1.25
POLR2B-208ENST00000478188 ABCC10Q5T3U5 1492 aa7.25□□□□□ -1.25
POLR2B-208ENST00000478188 MAP3K4Q9Y6R4 1608 aa7.25□□□□□ -1.25
POLR2B-208ENST00000478188 CARMIL2Q6F5E8 1435 aa7.24□□□□□ -1.25
POLR2B-208ENST00000478188 GOLGA3Q08378 1498 aa7.24□□□□□ -1.25
POLR2B-208ENST00000478188 ATF5Q9Y2D1 282 aaPredicted RBP7.23□□□□□ -1.25
POLR2B-208ENST00000478188 PTPRGP23470 1445 aa7.23□□□□□ -1.25
POLR2B-208ENST00000478188 UACAQ9BZF9 1416 aa7.23□□□□□ -1.25
POLR2B-208ENST00000478188 LRRIQ1Q96JM4 1722 aa7.23□□□□□ -1.25
POLR2B-208ENST00000478188 EFCAB5A4FU69 1503 aa7.22□□□□□ -1.25
POLR2B-208ENST00000478188 PLB1Q6P1J6 1458 aa7.22□□□□□ -1.25
POLR2B-208ENST00000478188 KDM6BO15054 1643 aa7.22□□□□□ -1.25
POLR2B-208ENST00000478188 RAPGEF6Q8TEU7 1601 aa7.22□□□□□ -1.25
POLR2B-208ENST00000478188 KDM4FA0A1W2PPD8 638 aa7.21□□□□□ -1.26
POLR2B-208ENST00000478188 ATXN8OSP0DMR3 200 aa7.21□□□□□ -1.26
POLR2B-208ENST00000478188 EPRSP07814 1512 aaKnown RBP7.19□□□□□ -1.26
POLR2B-208ENST00000478188 ASXL2Q76L83 1435 aa7.19□□□□□ -1.26
POLR2B-208ENST00000478188 CFAP43Q8NDM7 1665 aa7.19□□□□□ -1.26
POLR2B-208ENST00000478188 NUP153P49790 1475 aaKnown RBP7.18□□□□□ -1.26
POLR2B-208ENST00000478188 TSPOAP1O95153 1857 aa7.18□□□□□ -1.26
POLR2B-208ENST00000478188 ARHGAP35Q9NRY4 1499 aa7.18□□□□□ -1.26
POLR2B-208ENST00000478188 ABCA9Q8IUA7 1624 aa7.17□□□□□ -1.26
POLR2B-208ENST00000478188 SPATA31D1Q6ZQQ2 1576 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms