RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 CUL7Q14999 1698 aa17.64■□□□□ 0.41
LCLAT1-209ENST00000478015 CARMIL1Q5VZK9 1371 aa17.64■□□□□ 0.41
LCLAT1-209ENST00000478015 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.41
LCLAT1-209ENST00000478015 KIAA0586Q9BVV6 1533 aa17.58■□□□□ 0.4
LCLAT1-209ENST00000478015 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
LCLAT1-209ENST00000478015 IQGAP2Q13576 1575 aa17.45■□□□□ 0.38
LCLAT1-209ENST00000478015 ADCY10Q96PN6 1610 aa17.44■□□□□ 0.38
LCLAT1-209ENST00000478015 DISP1Q96F81 1524 aa17.43■□□□□ 0.38
LCLAT1-209ENST00000478015 TTBK1Q5TCY1 1321 aaPredicted RBP17.43■□□□□ 0.38
LCLAT1-209ENST00000478015 PRXQ9BXM0 1461 aa17.42■□□□□ 0.38
LCLAT1-209ENST00000478015 PTPRGP23470 1445 aa17.37■□□□□ 0.37
LCLAT1-209ENST00000478015 KIF13AQ9H1H9 1805 aa17.37■□□□□ 0.37
LCLAT1-209ENST00000478015 UGGT2Q9NYU1 1516 aa17.36■□□□□ 0.37
LCLAT1-209ENST00000478015 TNIKQ9UKE5 1360 aa17.34■□□□□ 0.37
LCLAT1-209ENST00000478015 CTTNBP2Q8WZ74 1663 aa17.33■□□□□ 0.36
LCLAT1-209ENST00000478015 CARMIL2Q6F5E8 1435 aa17.33■□□□□ 0.36
LCLAT1-209ENST00000478015 CSRNP3Q8WYN3 585 aa17.33■□□□□ 0.36
LCLAT1-209ENST00000478015 CHIC1Q5VXU3 224 aa17.31■□□□□ 0.36
LCLAT1-209ENST00000478015 FAM9AQ8IZU1 332 aaPredicted RBP17.31■□□□□ 0.36
LCLAT1-209ENST00000478015 KIAA0556O60303 1618 aa17.31■□□□□ 0.36
LCLAT1-209ENST00000478015 MAPKBP1O60336 1514 aa17.29■□□□□ 0.36
LCLAT1-209ENST00000478015 ABCC10Q5T3U5 1492 aa17.27■□□□□ 0.36
LCLAT1-209ENST00000478015 FAM69CQ0P6D2 419 aa17.26■□□□□ 0.35
LCLAT1-209ENST00000478015 DIP2BQ9P265 1576 aa17.25■□□□□ 0.35
LCLAT1-209ENST00000478015 NPM1P06748 294 aaKnown RBP eCLIP17.25■□□□□ 0.35
LCLAT1-209ENST00000478015 ABCC2Q92887 1545 aa17.25■□□□□ 0.35
LCLAT1-209ENST00000478015 UACAQ9BZF9 1416 aa17.25■□□□□ 0.35
LCLAT1-209ENST00000478015 PLB1Q6P1J6 1458 aa17.23■□□□□ 0.35
LCLAT1-209ENST00000478015 UHRF1BP1LA0JNW5 1464 aa17.22■□□□□ 0.35
LCLAT1-209ENST00000478015 P3H3Q8IVL6 736 aa17.2■□□□□ 0.34
LCLAT1-209ENST00000478015 ASXL2Q76L83 1435 aa17.19■□□□□ 0.34
LCLAT1-209ENST00000478015 KDM5BQ9UGL1 1544 aa17.19■□□□□ 0.34
LCLAT1-209ENST00000478015 EEA1Q15075 1411 aa17.18■□□□□ 0.34
LCLAT1-209ENST00000478015 TSPOAP1O95153 1857 aa17.16■□□□□ 0.34
LCLAT1-209ENST00000478015 EHMT2Q96KQ7 1210 aa17.16■□□□□ 0.34
LCLAT1-209ENST00000478015 ZCCHC11Q5TAX3 1644 aaKnown RBP17.16■□□□□ 0.34
LCLAT1-209ENST00000478015 RANGAP1P46060 587 aaPredicted RBP17.15■□□□□ 0.34
LCLAT1-209ENST00000478015 ABCA8O94911 1581 aa17.15■□□□□ 0.34
LCLAT1-209ENST00000478015 GOLGA3Q08378 1498 aa17.15■□□□□ 0.34
LCLAT1-209ENST00000478015 SAMD9Q5K651 1589 aa17.13■□□□□ 0.33
LCLAT1-209ENST00000478015 KIF21BO75037 1637 aa17.11■□□□□ 0.33
LCLAT1-209ENST00000478015 ARID3CA6NKF2 412 aa17.1■□□□□ 0.33
LCLAT1-209ENST00000478015 PPRC1Q5VV67 1664 aaKnown RBP17.1■□□□□ 0.33
LCLAT1-209ENST00000478015 EPRSP07814 1512 aaKnown RBP17.08■□□□□ 0.33
LCLAT1-209ENST00000478015 FHOD3Q2V2M9 1422 aa17.06■□□□□ 0.32
LCLAT1-209ENST00000478015 GLI2P10070 1586 aa17.06■□□□□ 0.32
LCLAT1-209ENST00000478015 ATP10BO94823 1461 aa17.03■□□□□ 0.32
LCLAT1-209ENST00000478015 WDR7Q9Y4E6 1490 aa17.03■□□□□ 0.32
LCLAT1-209ENST00000478015 MAP3K4Q9Y6R4 1608 aa17.03■□□□□ 0.32
LCLAT1-209ENST00000478015 COL17A1Q9UMD9 1497 aaPredicted RBP17.02■□□□□ 0.31
LCLAT1-209ENST00000478015 KCNH8Q96L42 1107 aa17.01■□□□□ 0.31
LCLAT1-209ENST00000478015 KDM6BO15054 1643 aa16.99■□□□□ 0.31
LCLAT1-209ENST00000478015 NUP153P49790 1475 aaKnown RBP16.99■□□□□ 0.31
LCLAT1-209ENST00000478015 UBTFP17480 764 aaKnown RBP16.99■□□□□ 0.31
LCLAT1-209ENST00000478015 RAPGEF6Q8TEU7 1601 aa16.98■□□□□ 0.31
LCLAT1-209ENST00000478015 ARHGAP35Q9NRY4 1499 aa16.93■□□□□ 0.3
LCLAT1-209ENST00000478015 EFCAB5A4FU69 1503 aa16.92■□□□□ 0.3
LCLAT1-209ENST00000478015 CD109Q6YHK3 1445 aa16.91■□□□□ 0.3
LCLAT1-209ENST00000478015 CFAP43Q8NDM7 1665 aa16.88■□□□□ 0.29
LCLAT1-209ENST00000478015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.86■□□□□ 0.29
LCLAT1-209ENST00000478015 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
LCLAT1-209ENST00000478015 CDK13Q14004 1512 aaKnown RBP16.86■□□□□ 0.29
LCLAT1-209ENST00000478015 MAGI3Q5TCQ9 1506 aa16.86■□□□□ 0.29
LCLAT1-209ENST00000478015 TEX14Q8IWB6 1497 aa16.85■□□□□ 0.29
LCLAT1-209ENST00000478015 ABCA9Q8IUA7 1624 aa16.84■□□□□ 0.29
LCLAT1-209ENST00000478015 KDM4FA0A1W2PPD8 638 aa16.83■□□□□ 0.28
LCLAT1-209ENST00000478015 LRRIQ1Q96JM4 1722 aa16.82■□□□□ 0.28
LCLAT1-209ENST00000478015 AEBP2Q6ZN18 517 aaPredicted RBP16.78■□□□□ 0.28
LCLAT1-209ENST00000478015 PLEKHD1A6NEE1 506 aa16.78■□□□□ 0.28
LCLAT1-209ENST00000478015 ATP1B4Q9UN42 357 aaPredicted RBP16.78■□□□□ 0.28
LCLAT1-209ENST00000478015 FMN1Q68DA7 1419 aa16.77■□□□□ 0.27
LCLAT1-209ENST00000478015 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.77■□□□□ 0.27
LCLAT1-209ENST00000478015 TTC37Q6PGP7 1564 aa16.76■□□□□ 0.27
LCLAT1-209ENST00000478015 RAPGEF3O95398 923 aa16.74■□□□□ 0.27
LCLAT1-209ENST00000478015 ARAP3Q8WWN8 1544 aa16.74■□□□□ 0.27
LCLAT1-209ENST00000478015 HECW1Q76N89 1606 aa16.73■□□□□ 0.27
LCLAT1-209ENST00000478015 PCF11O94913 1555 aaKnown RBP16.72■□□□□ 0.27
LCLAT1-209ENST00000478015 KIF14Q15058 1648 aa16.71■□□□□ 0.26
LCLAT1-209ENST00000478015 FRMPD1Q5SYB0 1578 aa16.7■□□□□ 0.26
LCLAT1-209ENST00000478015 CLIP1P30622 1438 aa16.7■□□□□ 0.26
LCLAT1-209ENST00000478015 LOC105371045A0A1W2PR82 267 aa16.69■□□□□ 0.26
LCLAT1-209ENST00000478015 NEO1Q92859 1461 aa16.68■□□□□ 0.26
LCLAT1-209ENST00000478015 ADGRL1O94910 1474 aa16.68■□□□□ 0.26
LCLAT1-209ENST00000478015 CASKIN1Q8WXD9 1431 aa16.67■□□□□ 0.26
LCLAT1-209ENST00000478015 FANCAO15360 1455 aa16.66■□□□□ 0.26
LCLAT1-209ENST00000478015 AKNAQ7Z591 1439 aa16.64■□□□□ 0.25
LCLAT1-209ENST00000478015 TROQ12816 1431 aaPredicted RBP16.63■□□□□ 0.25
LCLAT1-209ENST00000478015 PLCH2O75038 1416 aa16.63■□□□□ 0.25
LCLAT1-209ENST00000478015 PHLDB1Q86UU1 1377 aa16.63■□□□□ 0.25
LCLAT1-209ENST00000478015 RICTORQ6R327 1708 aa16.63■□□□□ 0.25
LCLAT1-209ENST00000478015 CEP162Q5TB80 1403 aa16.6■□□□□ 0.25
LCLAT1-209ENST00000478015 FYCO1Q9BQS8 1478 aa16.59■□□□□ 0.25
LCLAT1-209ENST00000478015 SIGLEC1Q9BZZ2 1709 aa16.58■□□□□ 0.24
LCLAT1-209ENST00000478015 MYO5CQ9NQX4 1742 aa16.58■□□□□ 0.24
LCLAT1-209ENST00000478015 CDK11AQ9UQ88 783 aaPredicted RBP16.58■□□□□ 0.24
LCLAT1-209ENST00000478015 DENND4BO75064 1496 aaPredicted RBP16.58■□□□□ 0.24
LCLAT1-209ENST00000478015 CDC42BPBQ9Y5S2 1711 aa16.57■□□□□ 0.24
LCLAT1-209ENST00000478015 CCDC18Q5T9S5 1454 aa16.56■□□□□ 0.24
LCLAT1-209ENST00000478015 SCAPERQ9BY12 1400 aa16.56■□□□□ 0.24
LCLAT1-209ENST00000478015 YEATS2Q9ULM3 1422 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms