RNA–Protein interactions for RNA: ENST00000477844.1

NUPL2-206, Transcript of nucleoporin like 2, humanhuman

TSL 1 (best)

Gene NUPL2, Length 2,529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUPL2-206ENST00000477844 ABCA5Q8WWZ7 1642 aa18.02■□□□□ 0.48
NUPL2-206ENST00000477844 TIAM1Q13009 1591 aa18.01■□□□□ 0.47
NUPL2-206ENST00000477844 CUL7Q14999 1698 aa18■□□□□ 0.47
NUPL2-206ENST00000477844 CCNB3Q8WWL7 1395 aa17.99■□□□□ 0.47
NUPL2-206ENST00000477844 TARBP1Q13395 1621 aaKnown RBP17.99■□□□□ 0.47
NUPL2-206ENST00000477844 RRBP1Q9P2E9 1410 aaKnown RBP17.99■□□□□ 0.47
NUPL2-206ENST00000477844 PHLDB1Q86UU1 1377 aa17.98■□□□□ 0.47
NUPL2-206ENST00000477844 CTTNBP2Q8WZ74 1663 aa17.98■□□□□ 0.47
NUPL2-206ENST00000477844 FAM50AQ14320 339 aaKnown RBP17.97■□□□□ 0.47
NUPL2-206ENST00000477844 LRRC9Q6ZRR7 1453 aa17.96■□□□□ 0.47
NUPL2-206ENST00000477844 DIEXFQ68CQ4 756 aaKnown RBP17.96■□□□□ 0.47
NUPL2-206ENST00000477844 ARID3CA6NKF2 412 aa17.94■□□□□ 0.46
NUPL2-206ENST00000477844 ZNF608Q9ULD9 1512 aaPredicted RBP17.94■□□□□ 0.46
NUPL2-206ENST00000477844 DHX57Q6P158 1386 aaKnown RBP17.94■□□□□ 0.46
NUPL2-206ENST00000477844 FHAD1B1AJZ9 1412 aa17.92■□□□□ 0.46
NUPL2-206ENST00000477844 MRC2Q9UBG0 1479 aa17.9■□□□□ 0.46
NUPL2-206ENST00000477844 ZNF316A6NFI3 1004 aaPredicted RBP17.89■□□□□ 0.45
NUPL2-206ENST00000477844 PBRM1Q86U86 1689 aa17.87■□□□□ 0.45
NUPL2-206ENST00000477844 CFAP43Q8NDM7 1665 aa17.86■□□□□ 0.45
NUPL2-206ENST00000477844 LRRIQ1Q96JM4 1722 aa17.85■□□□□ 0.45
NUPL2-206ENST00000477844 CASKIN1Q8WXD9 1431 aa17.85■□□□□ 0.45
NUPL2-206ENST00000477844 EFCAB5A4FU69 1503 aa17.85■□□□□ 0.45
NUPL2-206ENST00000477844 RAB3GAP2Q9H2M9 1393 aa17.83■□□□□ 0.45
NUPL2-206ENST00000477844 MAP3K1Q13233 1512 aa17.83■□□□□ 0.45
NUPL2-206ENST00000477844 SNAPC4Q5SXM2 1469 aa17.83■□□□□ 0.44
NUPL2-206ENST00000477844 FYCO1Q9BQS8 1478 aa17.83■□□□□ 0.44
NUPL2-206ENST00000477844 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
NUPL2-206ENST00000477844 SAMD9Q5K651 1589 aa17.8■□□□□ 0.44
NUPL2-206ENST00000477844 FMN1Q68DA7 1419 aa17.79■□□□□ 0.44
NUPL2-206ENST00000477844 MTUS2Q5JR59 1369 aa17.77■□□□□ 0.44
NUPL2-206ENST00000477844 ADAMTS12P58397 1594 aa17.77■□□□□ 0.43
NUPL2-206ENST00000477844 FBLN2P98095 1184 aa17.76■□□□□ 0.43
NUPL2-206ENST00000477844 GRIN2BQ13224 1484 aa17.76■□□□□ 0.43
NUPL2-206ENST00000477844 WDR62O43379 1518 aa17.74■□□□□ 0.43
NUPL2-206ENST00000477844 SIN3AQ96ST3 1273 aa17.73■□□□□ 0.43
NUPL2-206ENST00000477844 IFT140Q96RY7 1462 aa17.72■□□□□ 0.43
NUPL2-206ENST00000477844 SETD5Q9C0A6 1442 aa17.72■□□□□ 0.43
NUPL2-206ENST00000477844 MAGI3Q5TCQ9 1506 aa17.71■□□□□ 0.43
NUPL2-206ENST00000477844 NEUROD1Q13562 356 aa17.71■□□□□ 0.43
NUPL2-206ENST00000477844 MIER1Q8N108 512 aa17.71■□□□□ 0.43
NUPL2-206ENST00000477844 IQGAP2Q13576 1575 aa17.7■□□□□ 0.42
NUPL2-206ENST00000477844 EIF4G3O43432 1585 aaKnown RBP17.69■□□□□ 0.42
NUPL2-206ENST00000477844 PTPRKQ15262 1439 aa17.69■□□□□ 0.42
NUPL2-206ENST00000477844 CDK13Q14004 1512 aaKnown RBP17.68■□□□□ 0.42
NUPL2-206ENST00000477844 SCAF1Q9H7N4 1312 aaKnown RBP17.68■□□□□ 0.42
NUPL2-206ENST00000477844 MAPKBP1O60336 1514 aa17.68■□□□□ 0.42
NUPL2-206ENST00000477844 FGD6Q6ZV73 1430 aa17.67■□□□□ 0.42
NUPL2-206ENST00000477844 YTHDC1Q96MU7 727 aaKnown RBP17.67■□□□□ 0.42
NUPL2-206ENST00000477844 NCOA2Q15596 1464 aa17.66■□□□□ 0.42
NUPL2-206ENST00000477844 CHIC2Q9UKJ5 165 aa17.65■□□□□ 0.42
NUPL2-206ENST00000477844 THOC2Q8NI27 1593 aaKnown RBP17.65■□□□□ 0.42
NUPL2-206ENST00000477844 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
NUPL2-206ENST00000477844 CLSPNQ9HAW4 1339 aa17.63■□□□□ 0.41
NUPL2-206ENST00000477844 GRIN2AQ12879 1464 aa17.6■□□□□ 0.41
NUPL2-206ENST00000477844 RRP7BPQ9NSQ0 103 aa17.6■□□□□ 0.41
NUPL2-206ENST00000477844 EPRSP07814 1512 aaKnown RBP17.59■□□□□ 0.41
NUPL2-206ENST00000477844 DISP1Q96F81 1524 aa17.59■□□□□ 0.41
NUPL2-206ENST00000477844 MYOM3Q5VTT5 1437 aa17.58■□□□□ 0.4
NUPL2-206ENST00000477844 SUPT6HQ7KZ85 1726 aaKnown RBP17.57■□□□□ 0.4
NUPL2-206ENST00000477844 HIRIP3Q9BW71 556 aaPredicted RBP17.56■□□□□ 0.4
NUPL2-206ENST00000477844 KIAA0586Q9BVV6 1533 aa17.55■□□□□ 0.4
NUPL2-206ENST00000477844 UGGT2Q9NYU1 1516 aa17.55■□□□□ 0.4
NUPL2-206ENST00000477844 CEP170Q5SW79 1584 aa17.54■□□□□ 0.4
NUPL2-206ENST00000477844 EHBP1L1Q8N3D4 1523 aa17.54■□□□□ 0.4
NUPL2-206ENST00000477844 HECW1Q76N89 1606 aa17.54■□□□□ 0.4
NUPL2-206ENST00000477844 ZNF644Q9H582 1327 aaPredicted RBP17.53■□□□□ 0.4
NUPL2-206ENST00000477844 ACIN1Q9UKV3 1341 aaKnown RBP17.53■□□□□ 0.4
NUPL2-206ENST00000477844 KIAA0556O60303 1618 aa17.53■□□□□ 0.4
NUPL2-206ENST00000477844 PTPN23Q9H3S7 1636 aa17.53■□□□□ 0.4
NUPL2-206ENST00000477844 CCDC18Q5T9S5 1454 aa17.5■□□□□ 0.39
NUPL2-206ENST00000477844 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.5■□□□□ 0.39
NUPL2-206ENST00000477844 PLB1Q6P1J6 1458 aa17.49■□□□□ 0.39
NUPL2-206ENST00000477844 JPH4Q96JJ6 628 aa17.49■□□□□ 0.39
NUPL2-206ENST00000477844 ARHGEF11O15085 1522 aa17.49■□□□□ 0.39
NUPL2-206ENST00000477844 NUP153P49790 1475 aaKnown RBP17.49■□□□□ 0.39
NUPL2-206ENST00000477844 NAIPQ13075 1403 aa17.48■□□□□ 0.39
NUPL2-206ENST00000477844 SYNJ2O15056 1496 aa17.48■□□□□ 0.39
NUPL2-206ENST00000477844 MAGI1Q96QZ7 1491 aaPredicted RBP17.46■□□□□ 0.39
NUPL2-206ENST00000477844 KDM6BO15054 1643 aa17.46■□□□□ 0.39
NUPL2-206ENST00000477844 PRG4Q92954 1404 aaPredicted RBP17.45■□□□□ 0.38
NUPL2-206ENST00000477844 HFM1A2PYH4 1435 aa17.44■□□□□ 0.38
NUPL2-206ENST00000477844 FOXD1Q16676 465 aa17.44■□□□□ 0.38
NUPL2-206ENST00000477844 TRIM52Q96A61 297 aa17.44■□□□□ 0.38
NUPL2-206ENST00000477844 RAPGEF6Q8TEU7 1601 aa17.43■□□□□ 0.38
NUPL2-206ENST00000477844 ZNF777Q9ULD5 760 aaPredicted RBP17.42■□□□□ 0.38
NUPL2-206ENST00000477844 GTF3C3Q9Y5Q9 886 aa17.41■□□□□ 0.38
NUPL2-206ENST00000477844 CENPBP07199 599 aaPredicted RBP17.39■□□□□ 0.37
NUPL2-206ENST00000477844 NUP160Q12769 1436 aa17.37■□□□□ 0.37
NUPL2-206ENST00000477844 PPP1R15AO75807 674 aaPredicted RBP17.37■□□□□ 0.37
NUPL2-206ENST00000477844 KCNH8Q96L42 1107 aa17.37■□□□□ 0.37
NUPL2-206ENST00000477844 TCOF1Q13428 1488 aaKnown RBP17.37■□□□□ 0.37
NUPL2-206ENST00000477844 UACAQ9BZF9 1416 aa17.37■□□□□ 0.37
NUPL2-206ENST00000477844 DDX10Q13206 875 aaKnown RBP17.35■□□□□ 0.37
NUPL2-206ENST00000477844 KIF14Q15058 1648 aa17.35■□□□□ 0.37
NUPL2-206ENST00000477844 DENND4BO75064 1496 aaPredicted RBP17.34■□□□□ 0.37
NUPL2-206ENST00000477844 TONSLQ96HA7 1378 aa17.32■□□□□ 0.36
NUPL2-206ENST00000477844 ABCC5O15440 1437 aa17.31■□□□□ 0.36
NUPL2-206ENST00000477844 CFDP1Q9UEE9 299 aaPredicted RBP17.31■□□□□ 0.36
NUPL2-206ENST00000477844 CDK11AQ9UQ88 783 aaPredicted RBP17.31■□□□□ 0.36
NUPL2-206ENST00000477844 CARMIL2Q6F5E8 1435 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms