RNA–Protein interactions for RNA: ENST00000477844.1

NUPL2-206, Transcript of nucleoporin like 2, humanhuman

TSL 1 (best)

Gene NUPL2, Length 2,529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUPL2-206ENST00000477844 NISCHQ9Y2I1 1504 aa25.88■■□□□ 1.73
NUPL2-206ENST00000477844 SHROOM4Q9ULL8 1493 aa22.12■■□□□ 1.13
NUPL2-206ENST00000477844 CCDC180Q9P1Z9 1646 aa22.04■■□□□ 1.12
NUPL2-206ENST00000477844 DCAF8L2P0C7V8 631 aa21.86■■□□□ 1.09
NUPL2-206ENST00000477844 ZCCHC6Q5VYS8 1495 aaKnown RBP21.79■■□□□ 1.08
NUPL2-206ENST00000477844 SUPT5HO00267 1087 aaKnown RBP21.49■■□□□ 1.03
NUPL2-206ENST00000477844 DCAF1Q9Y4B6 1507 aa21.07■□□□□ 0.96
NUPL2-206ENST00000477844 ABCC9O60706 1549 aa21■□□□□ 0.95
NUPL2-206ENST00000477844 SCRIBQ14160 1630 aa20.84■□□□□ 0.93
NUPL2-206ENST00000477844 CHIC1Q5VXU3 224 aa20.61■□□□□ 0.89
NUPL2-206ENST00000477844 MYO15BQ96JP2 1530 aa20.54■□□□□ 0.88
NUPL2-206ENST00000477844 NACADO15069 1562 aa20.48■□□□□ 0.87
NUPL2-206ENST00000477844 RSF1Q96T23 1441 aaPredicted RBP20.4■□□□□ 0.86
NUPL2-206ENST00000477844 CECR2Q9BXF3 1484 aa20.36■□□□□ 0.85
NUPL2-206ENST00000477844 RB1CC1Q8TDY2 1594 aa20.26■□□□□ 0.83
NUPL2-206ENST00000477844 MROH2BQ7Z745 1585 aa20.2■□□□□ 0.82
NUPL2-206ENST00000477844 LOC105371045A0A1W2PR82 267 aa20.14■□□□□ 0.82
NUPL2-206ENST00000477844 WIZO95785 1651 aa20.1■□□□□ 0.81
NUPL2-206ENST00000477844 PABPN1Q86U42 306 aaKnown RBP eCLIP20.1■□□□□ 0.81
NUPL2-206ENST00000477844 UNC13AQ9UPW8 1703 aa20.09■□□□□ 0.81
NUPL2-206ENST00000477844 FAM9AQ8IZU1 332 aaPredicted RBP19.93■□□□□ 0.78
NUPL2-206ENST00000477844 TRIM41Q8WV44 630 aa19.91■□□□□ 0.78
NUPL2-206ENST00000477844 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
NUPL2-206ENST00000477844 BAZ1AQ9NRL2 1556 aaPredicted RBP19.85■□□□□ 0.77
NUPL2-206ENST00000477844 BICRAQ9NZM4 1560 aa19.83■□□□□ 0.76
NUPL2-206ENST00000477844 SMARCA4P51532 1647 aa19.79■□□□□ 0.76
NUPL2-206ENST00000477844 PCGF6Q9BYE7 350 aa19.7■□□□□ 0.74
NUPL2-206ENST00000477844 CCDC88BA6NC98 1476 aa19.65■□□□□ 0.74
NUPL2-206ENST00000477844 TOP2AP11388 1531 aaKnown RBP19.63■□□□□ 0.73
NUPL2-206ENST00000477844 SMARCA2P51531 1590 aa19.58■□□□□ 0.72
NUPL2-206ENST00000477844 ABCC8Q09428 1581 aa19.57■□□□□ 0.72
NUPL2-206ENST00000477844 EIF4G1Q04637 1599 aaKnown RBP19.55■□□□□ 0.72
NUPL2-206ENST00000477844 ATAD2BQ9ULI0 1458 aa19.38■□□□□ 0.69
NUPL2-206ENST00000477844 PPARGC1BQ86YN6 1023 aaKnown RBP19.36■□□□□ 0.69
NUPL2-206ENST00000477844 HRCP23327 699 aa19.31■□□□□ 0.68
NUPL2-206ENST00000477844 PEG3Q9GZU2 1588 aa19.31■□□□□ 0.68
NUPL2-206ENST00000477844 SOGA1O94964 1423 aa19.31■□□□□ 0.68
NUPL2-206ENST00000477844 BAZ1BQ9UIG0 1483 aaKnown RBP19.3■□□□□ 0.68
NUPL2-206ENST00000477844 RUSC2Q8N2Y8 1516 aa19.28■□□□□ 0.68
NUPL2-206ENST00000477844 TRIM26Q12899 539 aaPredicted RBP19.23■□□□□ 0.67
NUPL2-206ENST00000477844 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
NUPL2-206ENST00000477844 TTBK1Q5TCY1 1321 aaPredicted RBP19.13■□□□□ 0.65
NUPL2-206ENST00000477844 SYNJ1O43426 1573 aa19.13■□□□□ 0.65
NUPL2-206ENST00000477844 CSRNP3Q8WYN3 585 aa19.08■□□□□ 0.65
NUPL2-206ENST00000477844 UBTFP17480 764 aaKnown RBP19.05■□□□□ 0.64
NUPL2-206ENST00000477844 NCAPD3P42695 1498 aa19■□□□□ 0.63
NUPL2-206ENST00000477844 RANGAP1P46060 587 aaPredicted RBP18.98■□□□□ 0.63
NUPL2-206ENST00000477844 CEP162Q5TB80 1403 aa18.96■□□□□ 0.63
NUPL2-206ENST00000477844 HMGXB3Q12766 1538 aa18.92■□□□□ 0.62
NUPL2-206ENST00000477844 TNIKQ9UKE5 1360 aa18.88■□□□□ 0.61
NUPL2-206ENST00000477844 EEA1Q15075 1411 aa18.86■□□□□ 0.61
NUPL2-206ENST00000477844 GOLGA3Q08378 1498 aa18.83■□□□□ 0.61
NUPL2-206ENST00000477844 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
NUPL2-206ENST00000477844 TOP2BQ02880 1626 aa18.82■□□□□ 0.6
NUPL2-206ENST00000477844 RAPGEF2Q9Y4G8 1499 aa18.8■□□□□ 0.6
NUPL2-206ENST00000477844 CUX1P39880 1505 aa18.8■□□□□ 0.6
NUPL2-206ENST00000477844 CFTRP13569 1480 aa18.78■□□□□ 0.6
NUPL2-206ENST00000477844 CEP164Q9UPV0 1460 aa18.74■□□□□ 0.59
NUPL2-206ENST00000477844 BIVM-ERCC5R4GMW8 1640 aa18.74■□□□□ 0.59
NUPL2-206ENST00000477844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.73■□□□□ 0.59
NUPL2-206ENST00000477844 DNAJC5BQ9UF47 199 aa18.73■□□□□ 0.59
NUPL2-206ENST00000477844 KIF21BO75037 1637 aa18.7■□□□□ 0.58
NUPL2-206ENST00000477844 CLIP1P30622 1438 aa18.66■□□□□ 0.58
NUPL2-206ENST00000477844 CADPSQ9ULU8 1353 aa18.66■□□□□ 0.58
NUPL2-206ENST00000477844 NESP48681 1621 aa18.63■□□□□ 0.57
NUPL2-206ENST00000477844 PRXQ9BXM0 1461 aa18.55■□□□□ 0.56
NUPL2-206ENST00000477844 CCER1Q8TC90 406 aaPredicted RBP18.55■□□□□ 0.56
NUPL2-206ENST00000477844 PRDM2Q13029 1718 aa18.55■□□□□ 0.56
NUPL2-206ENST00000477844 KIF27Q86VH2 1401 aa18.55■□□□□ 0.56
NUPL2-206ENST00000477844 CUX2O14529 1486 aa18.53■□□□□ 0.56
NUPL2-206ENST00000477844 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.55
NUPL2-206ENST00000477844 FANCD2Q9BXW9 1451 aa18.51■□□□□ 0.55
NUPL2-206ENST00000477844 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
NUPL2-206ENST00000477844 ZEB1P37275 1124 aaPredicted RBP18.5■□□□□ 0.55
NUPL2-206ENST00000477844 VPS8Q8N3P4 1428 aa18.49■□□□□ 0.55
NUPL2-206ENST00000477844 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.55
NUPL2-206ENST00000477844 IGF1RP08069 1367 aa18.46■□□□□ 0.55
NUPL2-206ENST00000477844 APLP2Q06481 763 aa18.44■□□□□ 0.54
NUPL2-206ENST00000477844 ERICH3Q5RHP9 1530 aa18.43■□□□□ 0.54
NUPL2-206ENST00000477844 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
NUPL2-206ENST00000477844 KANK4Q5T7N3 995 aaPredicted RBP18.41■□□□□ 0.54
NUPL2-206ENST00000477844 P3H3Q8IVL6 736 aa18.37■□□□□ 0.53
NUPL2-206ENST00000477844 CARMIL1Q5VZK9 1371 aa18.36■□□□□ 0.53
NUPL2-206ENST00000477844 TOPBP1Q92547 1522 aa18.35■□□□□ 0.53
NUPL2-206ENST00000477844 POLA1P09884 1462 aaPredicted RBP18.33■□□□□ 0.53
NUPL2-206ENST00000477844 ARHGAP35Q9NRY4 1499 aa18.33■□□□□ 0.52
NUPL2-206ENST00000477844 URB2Q14146 1524 aaKnown RBP18.3■□□□□ 0.52
NUPL2-206ENST00000477844 DNMBPQ6XZF7 1577 aa18.3■□□□□ 0.52
NUPL2-206ENST00000477844 TDRD9Q8NDG6 1382 aaKnown RBP18.27■□□□□ 0.51
NUPL2-206ENST00000477844 ATP1B4Q9UN42 357 aaPredicted RBP18.23■□□□□ 0.51
NUPL2-206ENST00000477844 KIF21AQ7Z4S6 1674 aa18.22■□□□□ 0.51
NUPL2-206ENST00000477844 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
NUPL2-206ENST00000477844 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
NUPL2-206ENST00000477844 ITGAEP38570 1179 aa18.2■□□□□ 0.5
NUPL2-206ENST00000477844 PDS5BQ9NTI5 1447 aa18.14■□□□□ 0.49
NUPL2-206ENST00000477844 FHOD3Q2V2M9 1422 aa18.13■□□□□ 0.49
NUPL2-206ENST00000477844 WDR97A6NE52 1622 aa18.08■□□□□ 0.48
NUPL2-206ENST00000477844 GAPVD1Q14C86 1478 aa18.06■□□□□ 0.48
NUPL2-206ENST00000477844 AQRO60306 1485 aaKnown RBP eCLIP18.04■□□□□ 0.48
NUPL2-206ENST00000477844 PCF11O94913 1555 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms