RNA–Protein interactions for RNA: ENST00000477567.5

MMP11-208, Transcript of matrix metallopeptidase 11, humanhuman

TSL 5

Gene MMP11, Length 929 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-208ENST00000477567 CLASP1Q7Z460 1538 aa25.58■■□□□ 1.68
MMP11-208ENST00000477567 KIAA0586Q9BVV6 1533 aa25.55■■□□□ 1.68
MMP11-208ENST00000477567 IQGAP2Q13576 1575 aa25.48■■□□□ 1.67
MMP11-208ENST00000477567 SHROOM2Q13796 1616 aa25.45■■□□□ 1.67
MMP11-208ENST00000477567 RIMBP3CA6NJZ7 1639 aa25.42■■□□□ 1.66
MMP11-208ENST00000477567 RIMBP3BA6NNM3 1639 aa25.42■■□□□ 1.66
MMP11-208ENST00000477567 RIMBP3Q9UFD9 1639 aa25.42■■□□□ 1.66
MMP11-208ENST00000477567 UBTFP17480 764 aaKnown RBP25.42■■□□□ 1.66
MMP11-208ENST00000477567 TNIKQ9UKE5 1360 aa25.4■■□□□ 1.66
MMP11-208ENST00000477567 LOC105371045A0A1W2PR82 267 aa25.39■■□□□ 1.66
MMP11-208ENST00000477567 EHMT2Q96KQ7 1210 aa25.39■■□□□ 1.66
MMP11-208ENST00000477567 UGGT2Q9NYU1 1516 aa25.37■■□□□ 1.65
MMP11-208ENST00000477567 JPH4Q96JJ6 628 aa25.37■■□□□ 1.65
MMP11-208ENST00000477567 PRG4Q92954 1404 aaPredicted RBP25.27■■□□□ 1.64
MMP11-208ENST00000477567 SAMD9Q5K651 1589 aa25.27■■□□□ 1.64
MMP11-208ENST00000477567 DISP1Q96F81 1524 aa25.26■■□□□ 1.63
MMP11-208ENST00000477567 EFCAB5A4FU69 1503 aa25.23■■□□□ 1.63
MMP11-208ENST00000477567 KIAA0556O60303 1618 aa25.23■■□□□ 1.63
MMP11-208ENST00000477567 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
MMP11-208ENST00000477567 ARHGEF11O15085 1522 aa25.22■■□□□ 1.63
MMP11-208ENST00000477567 CARMIL2Q6F5E8 1435 aa25.21■■□□□ 1.63
MMP11-208ENST00000477567 CEP162Q5TB80 1403 aa25.16■■□□□ 1.62
MMP11-208ENST00000477567 ARHGAP35Q9NRY4 1499 aa25.15■■□□□ 1.62
MMP11-208ENST00000477567 CLIP1P30622 1438 aa25.15■■□□□ 1.62
MMP11-208ENST00000477567 RANGAP1P46060 587 aaPredicted RBP25.11■■□□□ 1.61
MMP11-208ENST00000477567 FHOD3Q2V2M9 1422 aa25.04■■□□□ 1.6
MMP11-208ENST00000477567 ARAP1Q96P48 1450 aa25.04■■□□□ 1.6
MMP11-208ENST00000477567 PTPRGP23470 1445 aa25.03■■□□□ 1.6
MMP11-208ENST00000477567 P3H3Q8IVL6 736 aa25.03■■□□□ 1.6
MMP11-208ENST00000477567 CYB5RLQ6IPT4 315 aa24.97■■□□□ 1.59
MMP11-208ENST00000477567 FMN1Q68DA7 1419 aa24.96■■□□□ 1.59
MMP11-208ENST00000477567 ABCA8O94911 1581 aa24.93■■□□□ 1.58
MMP11-208ENST00000477567 TRHP20396 242 aaPredicted RBP24.92■■□□□ 1.58
MMP11-208ENST00000477567 UACAQ9BZF9 1416 aa24.9■■□□□ 1.58
MMP11-208ENST00000477567 UHRF1BP1LA0JNW5 1464 aa24.89■■□□□ 1.58
MMP11-208ENST00000477567 PLB1Q6P1J6 1458 aa24.89■■□□□ 1.58
MMP11-208ENST00000477567 RAPGEF6Q8TEU7 1601 aa24.89■■□□□ 1.57
MMP11-208ENST00000477567 ABCC2Q92887 1545 aa24.87■■□□□ 1.57
MMP11-208ENST00000477567 TTBK1Q5TCY1 1321 aaPredicted RBP24.86■■□□□ 1.57
MMP11-208ENST00000477567 ADCY10Q96PN6 1610 aa24.86■■□□□ 1.57
MMP11-208ENST00000477567 VPS8Q8N3P4 1428 aa24.85■■□□□ 1.57
MMP11-208ENST00000477567 CASKIN1Q8WXD9 1431 aa24.84■■□□□ 1.57
MMP11-208ENST00000477567 PCF11O94913 1555 aaKnown RBP24.82■■□□□ 1.56
MMP11-208ENST00000477567 FYCO1Q9BQS8 1478 aa24.81■■□□□ 1.56
MMP11-208ENST00000477567 HECW1Q76N89 1606 aa24.79■■□□□ 1.56
MMP11-208ENST00000477567 NUP153P49790 1475 aaKnown RBP24.79■■□□□ 1.56
MMP11-208ENST00000477567 KDM5BQ9UGL1 1544 aa24.76■■□□□ 1.55
MMP11-208ENST00000477567 LRRIQ1Q96JM4 1722 aa24.76■■□□□ 1.55
MMP11-208ENST00000477567 ZCCHC11Q5TAX3 1644 aaKnown RBP24.72■■□□□ 1.55
MMP11-208ENST00000477567 EPRSP07814 1512 aaKnown RBP24.71■■□□□ 1.55
MMP11-208ENST00000477567 ATP10BO94823 1461 aa24.7■■□□□ 1.55
MMP11-208ENST00000477567 CCDC18Q5T9S5 1454 aa24.68■■□□□ 1.54
MMP11-208ENST00000477567 CDK13Q14004 1512 aaKnown RBP24.64■■□□□ 1.53
MMP11-208ENST00000477567 MAP3K1Q13233 1512 aa24.63■■□□□ 1.53
MMP11-208ENST00000477567 NPM1P06748 294 aaKnown RBP eCLIP24.63■■□□□ 1.53
MMP11-208ENST00000477567 ATP1B4Q9UN42 357 aaPredicted RBP24.63■■□□□ 1.53
MMP11-208ENST00000477567 MAPKBP1O60336 1514 aa24.62■■□□□ 1.53
MMP11-208ENST00000477567 CFAP43Q8NDM7 1665 aa24.62■■□□□ 1.53
MMP11-208ENST00000477567 TIAM1Q13009 1591 aa24.59■■□□□ 1.53
MMP11-208ENST00000477567 ARID3CA6NKF2 412 aa24.57■■□□□ 1.52
MMP11-208ENST00000477567 AEBP2Q6ZN18 517 aaPredicted RBP24.57■■□□□ 1.52
MMP11-208ENST00000477567 ASXL2Q76L83 1435 aa24.54■■□□□ 1.52
MMP11-208ENST00000477567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.52■■□□□ 1.52
MMP11-208ENST00000477567 HNRNPUL2Q1KMD3 747 aaKnown RBP24.52■■□□□ 1.52
MMP11-208ENST00000477567 CDK11AQ9UQ88 783 aaPredicted RBP24.52■■□□□ 1.52
MMP11-208ENST00000477567 WDR7Q9Y4E6 1490 aa24.51■■□□□ 1.51
MMP11-208ENST00000477567 MAGI3Q5TCQ9 1506 aa24.51■■□□□ 1.51
MMP11-208ENST00000477567 PLEKHD1A6NEE1 506 aa24.5■■□□□ 1.51
MMP11-208ENST00000477567 APLP2Q06481 763 aa24.48■■□□□ 1.51
MMP11-208ENST00000477567 TROQ12816 1431 aaPredicted RBP24.47■■□□□ 1.51
MMP11-208ENST00000477567 LRRC9Q6ZRR7 1453 aa24.45■■□□□ 1.51
MMP11-208ENST00000477567 EHBP1L1Q8N3D4 1523 aa24.45■■□□□ 1.5
MMP11-208ENST00000477567 ABCC10Q5T3U5 1492 aa24.42■■□□□ 1.5
MMP11-208ENST00000477567 MTUS2Q5JR59 1369 aa24.42■■□□□ 1.5
MMP11-208ENST00000477567 DIP2BQ9P265 1576 aa24.41■■□□□ 1.5
MMP11-208ENST00000477567 KIF13AQ9H1H9 1805 aa24.4■■□□□ 1.5
MMP11-208ENST00000477567 KANK4Q5T7N3 995 aaPredicted RBP24.4■■□□□ 1.5
MMP11-208ENST00000477567 GLI2P10070 1586 aa24.4■■□□□ 1.5
MMP11-208ENST00000477567 KIF14Q15058 1648 aa24.39■■□□□ 1.49
MMP11-208ENST00000477567 ABCA9Q8IUA7 1624 aa24.37■■□□□ 1.49
MMP11-208ENST00000477567 SUPT6HQ7KZ85 1726 aaKnown RBP24.37■■□□□ 1.49
MMP11-208ENST00000477567 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.35■■□□□ 1.49
MMP11-208ENST00000477567 KCNH8Q96L42 1107 aa24.34■■□□□ 1.49
MMP11-208ENST00000477567 TTC37Q6PGP7 1564 aa24.31■■□□□ 1.48
MMP11-208ENST00000477567 MAP3K4Q9Y6R4 1608 aa24.31■■□□□ 1.48
MMP11-208ENST00000477567 NCOA2Q15596 1464 aa24.29■■□□□ 1.48
MMP11-208ENST00000477567 FAM69CQ0P6D2 419 aa24.27■■□□□ 1.48
MMP11-208ENST00000477567 MYO5CQ9NQX4 1742 aa24.27■■□□□ 1.48
MMP11-208ENST00000477567 CDC42BPAQ5VT25 1732 aa24.26■■□□□ 1.47
MMP11-208ENST00000477567 ARAP3Q8WWN8 1544 aa24.23■■□□□ 1.47
MMP11-208ENST00000477567 CDC42BPBQ9Y5S2 1711 aa24.22■■□□□ 1.47
MMP11-208ENST00000477567 PREX2Q70Z35 1606 aa24.22■■□□□ 1.47
MMP11-208ENST00000477567 ITSN2Q9NZM3 1697 aa24.21■■□□□ 1.47
MMP11-208ENST00000477567 CD109Q6YHK3 1445 aa24.21■■□□□ 1.47
MMP11-208ENST00000477567 GPATCH8Q9UKJ3 1502 aaKnown RBP24.2■■□□□ 1.47
MMP11-208ENST00000477567 PLCH2O75038 1416 aa24.2■■□□□ 1.46
MMP11-208ENST00000477567 PPRC1Q5VV67 1664 aaKnown RBP24.2■■□□□ 1.46
MMP11-208ENST00000477567 CCNB3Q8WWL7 1395 aa24.18■■□□□ 1.46
MMP11-208ENST00000477567 TSPOAP1O95153 1857 aa24.18■■□□□ 1.46
MMP11-208ENST00000477567 PPARGC1BQ86YN6 1023 aaKnown RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms