RNA–Protein interactions for RNA: ENST00000477054.6

GSDMB-208, Transcript of gasdermin B, humanhuman

TSL 5

Gene GSDMB, Length 4,655 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-208ENST00000477054 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
GSDMB-208ENST00000477054 CADPSQ9ULU8 1353 aa13.35□□□□□ -0.27
GSDMB-208ENST00000477054 SETD5Q9C0A6 1442 aa13.33□□□□□ -0.28
GSDMB-208ENST00000477054 SLC24A1O60721 1099 aa13.33□□□□□ -0.28
GSDMB-208ENST00000477054 HIRIP3Q9BW71 556 aaPredicted RBP13.33□□□□□ -0.28
GSDMB-208ENST00000477054 SLC4A1APQ9BWU0 796 aaKnown RBP13.32□□□□□ -0.28
GSDMB-208ENST00000477054 TIMELESSQ9UNS1 1208 aa13.32□□□□□ -0.28
GSDMB-208ENST00000477054 EIF4G2P78344 907 aaKnown RBP eCLIP13.31□□□□□ -0.28
GSDMB-208ENST00000477054 SIN3AQ96ST3 1273 aa13.31□□□□□ -0.28
GSDMB-208ENST00000477054 ARHGAP35Q9NRY4 1499 aa13.3□□□□□ -0.28
GSDMB-208ENST00000477054 TSPY4P0CV99 314 aa13.3□□□□□ -0.28
GSDMB-208ENST00000477054 TSPY10P0CW01 314 aa13.3□□□□□ -0.28
GSDMB-208ENST00000477054 FAM9BQ8IZU0 186 aa13.27□□□□□ -0.28
GSDMB-208ENST00000477054 FMN1Q68DA7 1419 aa13.26□□□□□ -0.29
GSDMB-208ENST00000477054 RAB3GAP2Q9H2M9 1393 aa13.26□□□□□ -0.29
GSDMB-208ENST00000477054 KIF21BO75037 1637 aa13.26□□□□□ -0.29
GSDMB-208ENST00000477054 SUPT16HQ9Y5B9 1047 aaKnown RBP13.25□□□□□ -0.29
GSDMB-208ENST00000477054 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
GSDMB-208ENST00000477054 EIF4G1Q04637 1599 aaKnown RBP13.24□□□□□ -0.29
GSDMB-208ENST00000477054 NCAPD3P42695 1498 aa13.24□□□□□ -0.29
GSDMB-208ENST00000477054 MRS2Q9HD23 443 aa13.24□□□□□ -0.29
GSDMB-208ENST00000477054 PLEKHD1A6NEE1 506 aa13.23□□□□□ -0.29
GSDMB-208ENST00000477054 CFDP1Q9UEE9 299 aaPredicted RBP13.22□□□□□ -0.29
GSDMB-208ENST00000477054 SYNJ1O43426 1573 aa13.21□□□□□ -0.29
GSDMB-208ENST00000477054 DHX57Q6P158 1386 aaKnown RBP13.2□□□□□ -0.3
GSDMB-208ENST00000477054 TDRD9Q8NDG6 1382 aaKnown RBP13.19□□□□□ -0.3
GSDMB-208ENST00000477054 TMC1Q8TDI8 760 aa13.18□□□□□ -0.3
GSDMB-208ENST00000477054 FHOD3Q2V2M9 1422 aa13.18□□□□□ -0.3
GSDMB-208ENST00000477054 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
GSDMB-208ENST00000477054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.17□□□□□ -0.35e-7■■■□□ 19
GSDMB-208ENST00000477054 EIF5BO60841 1220 aaKnown RBP13.17□□□□□ -0.3
GSDMB-208ENST00000477054 KDM2AQ9Y2K7 1162 aa13.17□□□□□ -0.3
GSDMB-208ENST00000477054 ERICH3Q5RHP9 1530 aa13.17□□□□□ -0.3
GSDMB-208ENST00000477054 IGF1RP08069 1367 aa13.16□□□□□ -0.3
GSDMB-208ENST00000477054 TSHZ2Q9NRE2 1034 aa13.15□□□□□ -0.3
GSDMB-208ENST00000477054 ERCC6Q03468 1493 aa13.14□□□□□ -0.31
GSDMB-208ENST00000477054 FGD5Q6ZNL6 1462 aa13.14□□□□□ -0.31
GSDMB-208ENST00000477054 ANP32AP39687 249 aaKnown RBP13.13□□□□□ -0.31
GSDMB-208ENST00000477054 CCER2I3L3R5 266 aa13.13□□□□□ -0.31
GSDMB-208ENST00000477054 GLIPR1L2Q4G1C9 344 aa13.12□□□□□ -0.31
GSDMB-208ENST00000477054 TOP2BQ02880 1626 aa13.12□□□□□ -0.31
GSDMB-208ENST00000477054 CFTRP13569 1480 aa13.11□□□□□ -0.31
GSDMB-208ENST00000477054 HMGXB3Q12766 1538 aa13.1□□□□□ -0.31
GSDMB-208ENST00000477054 PPP1R15AO75807 674 aaPredicted RBP13.09□□□□□ -0.31
GSDMB-208ENST00000477054 BICRAQ9NZM4 1560 aa13.09□□□□□ -0.31
GSDMB-208ENST00000477054 CANXP27824 592 aaKnown RBP13.08□□□□□ -0.32
GSDMB-208ENST00000477054 PRXQ9BXM0 1461 aa13.08□□□□□ -0.32
GSDMB-208ENST00000477054 NBR1Q14596 966 aa13.07□□□□□ -0.32
GSDMB-208ENST00000477054 IRX6P78412 446 aaPredicted RBP13.07□□□□□ -0.32
GSDMB-208ENST00000477054 CCDC136Q96JN2 1154 aa13.07□□□□□ -0.32
GSDMB-208ENST00000477054 PRKCSHP14314 528 aaPredicted RBP13.06□□□□□ -0.32
GSDMB-208ENST00000477054 NPM1P06748 294 aaKnown RBP eCLIP13.06□□□□□ -0.32
GSDMB-208ENST00000477054 CARD11Q9BXL7 1154 aa13.05□□□□□ -0.32
GSDMB-208ENST00000477054 ARAP1Q96P48 1450 aa13.05□□□□□ -0.32
GSDMB-208ENST00000477054 RBM19Q9Y4C8 960 aaKnown RBP13.04□□□□□ -0.32
GSDMB-208ENST00000477054 PEG3Q9GZU2 1588 aa13.04□□□□□ -0.32
GSDMB-208ENST00000477054 CHGAP10645 457 aaKnown RBP13.04□□□□□ -0.32
GSDMB-208ENST00000477054 HSPA5P11021 654 aaKnown RBP13.04□□□□□ -0.32
GSDMB-208ENST00000477054 SALL2Q9Y467 1007 aaPredicted RBP13.04□□□□□ -0.32
GSDMB-208ENST00000477054 KCNH8Q96L42 1107 aa13.04□□□□□ -0.32
GSDMB-208ENST00000477054 CARMIL2Q6F5E8 1435 aa13.03□□□□□ -0.32
GSDMB-208ENST00000477054 MPHOSPH9Q99550 1183 aa13.03□□□□□ -0.32
GSDMB-208ENST00000477054 CUX1P39880 1505 aa13.02□□□□□ -0.32
GSDMB-208ENST00000477054 RRBP1Q9P2E9 1410 aaKnown RBP13.02□□□□□ -0.33
GSDMB-208ENST00000477054 RAD54L2Q9Y4B4 1467 aa13.02□□□□□ -0.33
GSDMB-208ENST00000477054 DEKP35659 375 aaKnown RBP13.01□□□□□ -0.33
GSDMB-208ENST00000477054 LRRC9Q6ZRR7 1453 aa13.01□□□□□ -0.33
GSDMB-208ENST00000477054 WDR43Q15061 677 aaKnown RBP eCLIP13.01□□□□□ -0.33
GSDMB-208ENST00000477054 RGL3Q3MIN7 710 aa13.01□□□□□ -0.33
GSDMB-208ENST00000477054 CCDC18Q5T9S5 1454 aa13.01□□□□□ -0.33
GSDMB-208ENST00000477054 NEFMP07197 916 aa12.99□□□□□ -0.33
GSDMB-208ENST00000477054 GAPVD1Q14C86 1478 aa12.99□□□□□ -0.33
GSDMB-208ENST00000477054 NPM2Q86SE8 214 aaKnown RBP12.98□□□□□ -0.33
GSDMB-208ENST00000477054 PHLDB1Q86UU1 1377 aa12.98□□□□□ -0.33
GSDMB-208ENST00000477054 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.97□□□□□ -0.33
GSDMB-208ENST00000477054 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
GSDMB-208ENST00000477054 FOXD1Q16676 465 aa12.97□□□□□ -0.33
GSDMB-208ENST00000477054 CASKIN1Q8WXD9 1431 aa12.96□□□□□ -0.33
GSDMB-208ENST00000477054 UNC13AQ9UPW8 1703 aa12.96□□□□□ -0.34
GSDMB-208ENST00000477054 PKD2Q13563 968 aa12.95□□□□□ -0.34
GSDMB-208ENST00000477054 FGD6Q6ZV73 1430 aa12.95□□□□□ -0.34
GSDMB-208ENST00000477054 PPP4R2Q9NY27 417 aa12.95□□□□□ -0.34
GSDMB-208ENST00000477054 ANKRD30AQ9BXX3 1397 aa12.95□□□□□ -0.34
GSDMB-208ENST00000477054 CDCA8Q53HL2 280 aa12.95□□□□□ -0.34
GSDMB-208ENST00000477054 ERICH6BQ5W0A0 696 aa12.93□□□□□ -0.34
GSDMB-208ENST00000477054 FYCO1Q9BQS8 1478 aa12.93□□□□□ -0.34
GSDMB-208ENST00000477054 DCAF11Q8TEB1 546 aa12.93□□□□□ -0.34
GSDMB-208ENST00000477054 L3MBTL2Q969R5 705 aa12.93□□□□□ -0.34
GSDMB-208ENST00000477054 MYOM3Q5VTT5 1437 aa12.92□□□□□ -0.34
GSDMB-208ENST00000477054 EFCAB5A4FU69 1503 aa12.91□□□□□ -0.34
GSDMB-208ENST00000477054 KNSTRNQ9Y448 316 aa12.9□□□□□ -0.34
GSDMB-208ENST00000477054 STAG3Q9UJ98 1225 aa12.9□□□□□ -0.34
GSDMB-208ENST00000477054 NUP155O75694 1391 aa12.9□□□□□ -0.35
GSDMB-208ENST00000477054 TIAM1Q13009 1591 aa12.88□□□□□ -0.35
GSDMB-208ENST00000477054 UACAQ9BZF9 1416 aa12.88□□□□□ -0.35
GSDMB-208ENST00000477054 NOP58Q9Y2X3 529 aaKnown RBP12.88□□□□□ -0.35
GSDMB-208ENST00000477054 TOPBP1Q92547 1522 aa12.87□□□□□ -0.35
GSDMB-208ENST00000477054 ESF1Q9H501 851 aaKnown RBP12.86□□□□□ -0.35
GSDMB-208ENST00000477054 CC2D2AQ9P2K1 1620 aa12.86□□□□□ -0.35
GSDMB-208ENST00000477054 NCOA2Q15596 1464 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms