RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 KIF27Q86VH2 1401 aa20.37■□□□□ 0.85
VARS2-208ENST00000477052 CUL7Q14999 1698 aa20.29■□□□□ 0.84
VARS2-208ENST00000477052 TTBK1Q5TCY1 1321 aaPredicted RBP20.27■□□□□ 0.84
VARS2-208ENST00000477052 KIAA0586Q9BVV6 1533 aa20.27■□□□□ 0.84
VARS2-208ENST00000477052 CARMIL1Q5VZK9 1371 aa20.26■□□□□ 0.83
VARS2-208ENST00000477052 KIF13AQ9H1H9 1805 aa20.23■□□□□ 0.83
VARS2-208ENST00000477052 ADCY10Q96PN6 1610 aa20.22■□□□□ 0.83
VARS2-208ENST00000477052 NPM1P06748 294 aaKnown RBP eCLIP20.2■□□□□ 0.82
VARS2-208ENST00000477052 FAM69CQ0P6D2 419 aa20.19■□□□□ 0.82
VARS2-208ENST00000477052 AEBP2Q6ZN18 517 aaPredicted RBP20.14■□□□□ 0.81
VARS2-208ENST00000477052 ABCC10Q5T3U5 1492 aa20.13■□□□□ 0.81
VARS2-208ENST00000477052 PTPRGP23470 1445 aa20.13■□□□□ 0.81
VARS2-208ENST00000477052 MAPKBP1O60336 1514 aa20.11■□□□□ 0.81
VARS2-208ENST00000477052 IQGAP2Q13576 1575 aa20.1■□□□□ 0.81
VARS2-208ENST00000477052 DIP2BQ9P265 1576 aa20.09■□□□□ 0.81
VARS2-208ENST00000477052 TNIKQ9UKE5 1360 aa20.08■□□□□ 0.8
VARS2-208ENST00000477052 CARMIL2Q6F5E8 1435 aa20.07■□□□□ 0.8
VARS2-208ENST00000477052 RAPGEF2Q9Y4G8 1499 aa20.05■□□□□ 0.8
VARS2-208ENST00000477052 DISP1Q96F81 1524 aa20.04■□□□□ 0.8
VARS2-208ENST00000477052 TSPOAP1O95153 1857 aa20.03■□□□□ 0.8
VARS2-208ENST00000477052 ABCC2Q92887 1545 aa19.98■□□□□ 0.79
VARS2-208ENST00000477052 ASXL2Q76L83 1435 aa19.96■□□□□ 0.79
VARS2-208ENST00000477052 UACAQ9BZF9 1416 aa19.96■□□□□ 0.79
VARS2-208ENST00000477052 UGGT2Q9NYU1 1516 aa19.96■□□□□ 0.79
VARS2-208ENST00000477052 KIAA0556O60303 1618 aa19.93■□□□□ 0.78
VARS2-208ENST00000477052 UHRF1BP1LA0JNW5 1464 aa19.92■□□□□ 0.78
VARS2-208ENST00000477052 KDM6BO15054 1643 aa19.91■□□□□ 0.78
VARS2-208ENST00000477052 PLB1Q6P1J6 1458 aa19.88■□□□□ 0.77
VARS2-208ENST00000477052 CTTNBP2Q8WZ74 1663 aa19.87■□□□□ 0.77
VARS2-208ENST00000477052 ZCCHC11Q5TAX3 1644 aaKnown RBP19.86■□□□□ 0.77
VARS2-208ENST00000477052 KDM5BQ9UGL1 1544 aa19.85■□□□□ 0.77
VARS2-208ENST00000477052 PRXQ9BXM0 1461 aa19.85■□□□□ 0.77
VARS2-208ENST00000477052 PPRC1Q5VV67 1664 aaKnown RBP19.84■□□□□ 0.77
VARS2-208ENST00000477052 GLI2P10070 1586 aa19.83■□□□□ 0.76
VARS2-208ENST00000477052 EPRSP07814 1512 aaKnown RBP19.82■□□□□ 0.76
VARS2-208ENST00000477052 P3H3Q8IVL6 736 aa19.81■□□□□ 0.76
VARS2-208ENST00000477052 KDM4FA0A1W2PPD8 638 aa19.79■□□□□ 0.76
VARS2-208ENST00000477052 ARID3CA6NKF2 412 aa19.78■□□□□ 0.76
VARS2-208ENST00000477052 GOLGA3Q08378 1498 aa19.77■□□□□ 0.76
VARS2-208ENST00000477052 COL17A1Q9UMD9 1497 aaPredicted RBP19.76■□□□□ 0.75
VARS2-208ENST00000477052 KCNH8Q96L42 1107 aa19.75■□□□□ 0.75
VARS2-208ENST00000477052 MAP3K4Q9Y6R4 1608 aa19.75■□□□□ 0.75
VARS2-208ENST00000477052 ABCA8O94911 1581 aa19.74■□□□□ 0.75
VARS2-208ENST00000477052 CSRNP3Q8WYN3 585 aa19.74■□□□□ 0.75
VARS2-208ENST00000477052 WDR7Q9Y4E6 1490 aa19.73■□□□□ 0.75
VARS2-208ENST00000477052 RANGAP1P46060 587 aaPredicted RBP19.73■□□□□ 0.75
VARS2-208ENST00000477052 FAM9AQ8IZU1 332 aaPredicted RBP19.73■□□□□ 0.75
VARS2-208ENST00000477052 TEX14Q8IWB6 1497 aa19.65■□□□□ 0.74
VARS2-208ENST00000477052 CD109Q6YHK3 1445 aa19.64■□□□□ 0.73
VARS2-208ENST00000477052 ATP10BO94823 1461 aa19.61■□□□□ 0.73
VARS2-208ENST00000477052 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
VARS2-208ENST00000477052 SAMD9Q5K651 1589 aa19.6■□□□□ 0.73
VARS2-208ENST00000477052 ADGRL1O94910 1474 aa19.6■□□□□ 0.73
VARS2-208ENST00000477052 CFAP43Q8NDM7 1665 aa19.58■□□□□ 0.72
VARS2-208ENST00000477052 MAGI3Q5TCQ9 1506 aa19.56■□□□□ 0.72
VARS2-208ENST00000477052 FHOD3Q2V2M9 1422 aa19.56■□□□□ 0.72
VARS2-208ENST00000477052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.55■□□□□ 0.72
VARS2-208ENST00000477052 HNRNPUL2Q1KMD3 747 aaKnown RBP19.55■□□□□ 0.72
VARS2-208ENST00000477052 EEA1Q15075 1411 aa19.54■□□□□ 0.72
VARS2-208ENST00000477052 RAPGEF6Q8TEU7 1601 aa19.54■□□□□ 0.72
VARS2-208ENST00000477052 NUP153P49790 1475 aaKnown RBP19.48■□□□□ 0.71
VARS2-208ENST00000477052 ABCA9Q8IUA7 1624 aa19.45■□□□□ 0.7
VARS2-208ENST00000477052 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
VARS2-208ENST00000477052 KIF21BO75037 1637 aa19.44■□□□□ 0.7
VARS2-208ENST00000477052 RAPGEF3O95398 923 aa19.43■□□□□ 0.7
VARS2-208ENST00000477052 ARAP3Q8WWN8 1544 aa19.41■□□□□ 0.7
VARS2-208ENST00000477052 UBTFP17480 764 aaKnown RBP19.41■□□□□ 0.7
VARS2-208ENST00000477052 PLEKHD1A6NEE1 506 aa19.38■□□□□ 0.69
VARS2-208ENST00000477052 EFCAB5A4FU69 1503 aa19.36■□□□□ 0.69
VARS2-208ENST00000477052 ATP1B4Q9UN42 357 aaPredicted RBP19.36■□□□□ 0.69
VARS2-208ENST00000477052 CDK13Q14004 1512 aaKnown RBP19.35■□□□□ 0.69
VARS2-208ENST00000477052 NEO1Q92859 1461 aa19.33■□□□□ 0.68
VARS2-208ENST00000477052 FRMPD1Q5SYB0 1578 aa19.32■□□□□ 0.68
VARS2-208ENST00000477052 HECW2Q9P2P5 1572 aa19.32■□□□□ 0.68
VARS2-208ENST00000477052 PHLDB1Q86UU1 1377 aa19.31■□□□□ 0.68
VARS2-208ENST00000477052 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.3■□□□□ 0.68
VARS2-208ENST00000477052 TTC37Q6PGP7 1564 aa19.3■□□□□ 0.68
VARS2-208ENST00000477052 ARHGAP35Q9NRY4 1499 aa19.28■□□□□ 0.68
VARS2-208ENST00000477052 ARID4BQ4LE39 1312 aaPredicted RBP19.26■□□□□ 0.67
VARS2-208ENST00000477052 AKNAQ7Z591 1439 aa19.26■□□□□ 0.67
VARS2-208ENST00000477052 FANCAO15360 1455 aa19.26■□□□□ 0.67
VARS2-208ENST00000477052 DENND4BO75064 1496 aaPredicted RBP19.24■□□□□ 0.67
VARS2-208ENST00000477052 RICTORQ6R327 1708 aa19.21■□□□□ 0.67
VARS2-208ENST00000477052 ADAMTSL3P82987 1691 aa19.2■□□□□ 0.66
VARS2-208ENST00000477052 FMN1Q68DA7 1419 aa19.2■□□□□ 0.66
VARS2-208ENST00000477052 HECW1Q76N89 1606 aa19.2■□□□□ 0.66
VARS2-208ENST00000477052 ILDR1Q86SU0 546 aaPredicted RBP19.19■□□□□ 0.66
VARS2-208ENST00000477052 PTPRMP28827 1452 aa19.19■□□□□ 0.66
VARS2-208ENST00000477052 YEATS2Q9ULM3 1422 aa19.17■□□□□ 0.66
VARS2-208ENST00000477052 BCORL1Q5H9F3 1711 aa19.17■□□□□ 0.66
VARS2-208ENST00000477052 ARHGEF40Q8TER5 1519 aa19.17■□□□□ 0.66
VARS2-208ENST00000477052 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
VARS2-208ENST00000477052 CFAP74Q9C0B2 1584 aa19.17■□□□□ 0.66
VARS2-208ENST00000477052 MADDQ8WXG6 1647 aa19.17■□□□□ 0.66
VARS2-208ENST00000477052 KIF14Q15058 1648 aa19.16■□□□□ 0.66
VARS2-208ENST00000477052 PLCH2O75038 1416 aa19.16■□□□□ 0.66
VARS2-208ENST00000477052 LRRIQ1Q96JM4 1722 aa19.15■□□□□ 0.66
VARS2-208ENST00000477052 SCAPERQ9BY12 1400 aa19.15■□□□□ 0.66
VARS2-208ENST00000477052 SIGLEC1Q9BZZ2 1709 aa19.14■□□□□ 0.66
VARS2-208ENST00000477052 MLECQ14165 292 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms