RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, human

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GMDS-204	ENST00000476972	KIF27	Q86VH2	1401 aa		32.87	■■■□□ 2.85
GMDS-204	ENST00000476972	NPM1	P06748	294 aa	Known RBP eCLIP	32.83	■■■□□ 2.85
GMDS-204	ENST00000476972	RUSC2	Q8N2Y8	1516 aa		32.82	■■■□□ 2.85
GMDS-204	ENST00000476972	KIAA0586	Q9BVV6	1533 aa		32.79	■■■□□ 2.84
GMDS-204	ENST00000476972	CUL7	Q14999	1698 aa		32.78	■■■□□ 2.84
GMDS-204	ENST00000476972	FAM69C	Q0P6D2	419 aa		32.76	■■■□□ 2.83
GMDS-204	ENST00000476972	CARMIL1	Q5VZK9	1371 aa		32.7	■■■□□ 2.82
GMDS-204	ENST00000476972	ABCC10	Q5T3U5	1492 aa		32.66	■■■□□ 2.82
GMDS-204	ENST00000476972	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.59	■■■□□ 2.81
GMDS-204	ENST00000476972	KIF13A	Q9H1H9	1805 aa		32.59	■■■□□ 2.81
GMDS-204	ENST00000476972	MAPKBP1	O60336	1514 aa		32.58	■■■□□ 2.81
GMDS-204	ENST00000476972	PTPRG	P23470	1445 aa		32.58	■■■□□ 2.81
GMDS-204	ENST00000476972	ADCY10	Q96PN6	1610 aa		32.58	■■■□□ 2.81
GMDS-204	ENST00000476972	TNIK	Q9UKE5	1360 aa		32.48	■■■□□ 2.79
GMDS-204	ENST00000476972	CARMIL2	Q6F5E8	1435 aa		32.48	■■■□□ 2.79
GMDS-204	ENST00000476972	DIP2B	Q9P265	1576 aa		32.46	■■■□□ 2.79
GMDS-204	ENST00000476972	RAPGEF2	Q9Y4G8	1499 aa		32.36	■■■□□ 2.77
GMDS-204	ENST00000476972	IQGAP2	Q13576	1575 aa		32.35	■■■□□ 2.77
GMDS-204	ENST00000476972	ABCC2	Q92887	1545 aa		32.34	■■■□□ 2.77
GMDS-204	ENST00000476972	DISP1	Q96F81	1524 aa		32.3	■■■□□ 2.76
GMDS-204	ENST00000476972	UACA	Q9BZF9	1416 aa		32.28	■■■□□ 2.76
GMDS-204	ENST00000476972	ASXL2	Q76L83	1435 aa		32.27	■■■□□ 2.76
GMDS-204	ENST00000476972	UHRF1BP1L	A0JNW5	1464 aa		32.25	■■■□□ 2.75
GMDS-204	ENST00000476972	PLB1	Q6P1J6	1458 aa		32.24	■■■□□ 2.75
GMDS-204	ENST00000476972	KDM6B	O15054	1643 aa		32.22	■■■□□ 2.75
GMDS-204	ENST00000476972	PRX	Q9BXM0	1461 aa		32.19	■■■□□ 2.74
GMDS-204	ENST00000476972	UGGT2	Q9NYU1	1516 aa		32.19	■■■□□ 2.74
GMDS-204	ENST00000476972	KDM4F	A0A1W2PPD8	638 aa		32.18	■■■□□ 2.74
GMDS-204	ENST00000476972	CTTNBP2	Q8WZ74	1663 aa		32.16	■■■□□ 2.74
GMDS-204	ENST00000476972	TSPOAP1	O95153	1857 aa		32.16	■■■□□ 2.74
GMDS-204	ENST00000476972	KDM5B	Q9UGL1	1544 aa		32.11	■■■□□ 2.73
GMDS-204	ENST00000476972	GLI2	P10070	1586 aa		32.11	■■■□□ 2.73
GMDS-204	ENST00000476972	EPRS	P07814	1512 aa	Known RBP	32.05	■■■□□ 2.72
GMDS-204	ENST00000476972	EEA1	Q15075	1411 aa		32.05	■■■□□ 2.72
GMDS-204	ENST00000476972	KIAA0556	O60303	1618 aa		32.04	■■■□□ 2.72
GMDS-204	ENST00000476972	CSRNP3	Q8WYN3	585 aa		32.01	■■■□□ 2.71
GMDS-204	ENST00000476972	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.97	■■■□□ 2.71
GMDS-204	ENST00000476972	CHIC1	Q5VXU3	224 aa		31.96	■■■□□ 2.71
GMDS-204	ENST00000476972	PPRC1	Q5VV67	1664 aa	Known RBP	31.95	■■■□□ 2.71
GMDS-204	ENST00000476972	GOLGA3	Q08378	1498 aa		31.94	■■■□□ 2.7
GMDS-204	ENST00000476972	ZCCHC11	Q5TAX3	1644 aa	Known RBP	31.93	■■■□□ 2.7
GMDS-204	ENST00000476972	KCNH8	Q96L42	1107 aa		31.9	■■■□□ 2.7
GMDS-204	ENST00000476972	WDR7	Q9Y4E6	1490 aa		31.9	■■■□□ 2.7
GMDS-204	ENST00000476972	TEX14	Q8IWB6	1497 aa		31.88	■■■□□ 2.69
GMDS-204	ENST00000476972	MAP3K4	Q9Y6R4	1608 aa		31.86	■■■□□ 2.69
GMDS-204	ENST00000476972	FAM9A	Q8IZU1	332 aa	Predicted RBP	31.86	■■■□□ 2.69
GMDS-204	ENST00000476972	P3H3	Q8IVL6	736 aa		31.83	■■■□□ 2.69
GMDS-204	ENST00000476972	KIF21B	O75037	1637 aa		31.82	■■■□□ 2.68
GMDS-204	ENST00000476972	ABCA8	O94911	1581 aa		31.81	■■■□□ 2.68
GMDS-204	ENST00000476972	CD109	Q6YHK3	1445 aa		31.79	■■■□□ 2.68
GMDS-204	ENST00000476972	ARID3C	A6NKF2	412 aa		31.76	■■■□□ 2.67
GMDS-204	ENST00000476972	ADGRL1	O94910	1474 aa		31.75	■■■□□ 2.67
GMDS-204	ENST00000476972	SAMD9	Q5K651	1589 aa		31.71	■■■□□ 2.67
GMDS-204	ENST00000476972	MAGI3	Q5TCQ9	1506 aa		31.7	■■■□□ 2.67
GMDS-204	ENST00000476972	ATP10B	O94823	1461 aa		31.65	■■■□□ 2.66
GMDS-204	ENST00000476972	RANGAP1	P46060	587 aa	Predicted RBP	31.58	■■■□□ 2.65
GMDS-204	ENST00000476972	CFAP43	Q8NDM7	1665 aa		31.57	■■■□□ 2.64
GMDS-204	ENST00000476972	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	31.55	■■■□□ 2.64
GMDS-204	ENST00000476972	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31.55	■■■□□ 2.64
GMDS-204	ENST00000476972	EFCAB5	A4FU69	1503 aa		31.49	■■■□□ 2.63
GMDS-204	ENST00000476972	EHMT2	Q96KQ7	1210 aa		31.49	■■■□□ 2.63
GMDS-204	ENST00000476972	FHOD3	Q2V2M9	1422 aa		31.47	■■■□□ 2.63
GMDS-204	ENST00000476972	ARAP3	Q8WWN8	1544 aa		31.46	■■■□□ 2.63
GMDS-204	ENST00000476972	RAPGEF6	Q8TEU7	1601 aa		31.46	■■■□□ 2.63
GMDS-204	ENST00000476972	PHLDB1	Q86UU1	1377 aa		31.43	■■■□□ 2.62
GMDS-204	ENST00000476972	UBTF	P17480	764 aa	Known RBP	31.43	■■■□□ 2.62
GMDS-204	ENST00000476972	RAPGEF3	O95398	923 aa		31.42	■■■□□ 2.62
GMDS-204	ENST00000476972	NUP153	P49790	1475 aa	Known RBP	31.38	■■■□□ 2.61
GMDS-204	ENST00000476972	ABCA9	Q8IUA7	1624 aa		31.36	■■■□□ 2.61
GMDS-204	ENST00000476972	PLEKHD1	A6NEE1	506 aa		31.36	■■■□□ 2.61
GMDS-204	ENST00000476972	ILDR1	Q86SU0	546 aa	Predicted RBP	31.35	■■■□□ 2.61
GMDS-204	ENST00000476972	NEO1	Q92859	1461 aa		31.31	■■■□□ 2.6
GMDS-204	ENST00000476972	HECW2	Q9P2P5	1572 aa		31.3	■■■□□ 2.6
GMDS-204	ENST00000476972	ARHGAP35	Q9NRY4	1499 aa		31.27	■■■□□ 2.6
GMDS-204	ENST00000476972	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.19	■■■□□ 2.58
GMDS-204	ENST00000476972	FMN1	Q68DA7	1419 aa		31.15	■■■□□ 2.58
GMDS-204	ENST00000476972	AKNA	Q7Z591	1439 aa		31.15	■■■□□ 2.58
GMDS-204	ENST00000476972	DENND4B	O75064	1496 aa	Predicted RBP	31.12	■■■□□ 2.57
GMDS-204	ENST00000476972	PTPRM	P28827	1452 aa		31.11	■■■□□ 2.57
GMDS-204	ENST00000476972	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.11	■■■□□ 2.57
GMDS-204	ENST00000476972	HECW1	Q76N89	1606 aa		31.1	■■■□□ 2.57
GMDS-204	ENST00000476972	FRMPD1	Q5SYB0	1578 aa		31.1	■■■□□ 2.57
GMDS-204	ENST00000476972	CDK13	Q14004	1512 aa	Known RBP	31.09	■■■□□ 2.57
GMDS-204	ENST00000476972	FANCA	O15360	1455 aa		31.09	■■■□□ 2.57
GMDS-204	ENST00000476972	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.08	■■■□□ 2.57
GMDS-204	ENST00000476972	ADAMTSL3	P82987	1691 aa		31.05	■■■□□ 2.56
GMDS-204	ENST00000476972	TTC37	Q6PGP7	1564 aa		30.98	■■■□□ 2.55
GMDS-204	ENST00000476972	LRRIQ1	Q96JM4	1722 aa		30.98	■■■□□ 2.55
GMDS-204	ENST00000476972	PLCH2	O75038	1416 aa		30.98	■■■□□ 2.55
GMDS-204	ENST00000476972	PCF11	O94913	1555 aa	Known RBP	30.97	■■■□□ 2.55
GMDS-204	ENST00000476972	CLIP1	P30622	1438 aa		30.97	■■■□□ 2.55
GMDS-204	ENST00000476972	CDK11A	Q9UQ88	783 aa	Predicted RBP	30.96	■■■□□ 2.55
GMDS-204	ENST00000476972	BCORL1	Q5H9F3	1711 aa		30.94	■■■□□ 2.54
GMDS-204	ENST00000476972	SCAPER	Q9BY12	1400 aa		30.94	■■■□□ 2.54
GMDS-204	ENST00000476972	ARHGEF40	Q8TER5	1519 aa		30.93	■■■□□ 2.54
GMDS-204	ENST00000476972	YEATS2	Q9ULM3	1422 aa		30.93	■■■□□ 2.54
GMDS-204	ENST00000476972	EFCAB2	Q5VUJ9	269 aa		30.93	■■■□□ 2.54
GMDS-204	ENST00000476972	CFAP74	Q9C0B2	1584 aa		30.92	■■■□□ 2.54
GMDS-204	ENST00000476972	RICTOR	Q6R327	1708 aa		30.91	■■■□□ 2.54
GMDS-204	ENST00000476972	MADD	Q8WXG6	1647 aa		30.91	■■■□□ 2.54

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