RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 IGF1RP08069 1367 aa25.2■■□□□ 1.63
COL2A1-205ENST00000474996 CUL7Q14999 1698 aa25.18■■□□□ 1.62
COL2A1-205ENST00000474996 KIF13AQ9H1H9 1805 aa25.16■■□□□ 1.62
COL2A1-205ENST00000474996 KIAA0586Q9BVV6 1533 aa25.14■■□□□ 1.62
COL2A1-205ENST00000474996 AEBP2Q6ZN18 517 aaPredicted RBP25.07■■□□□ 1.6
COL2A1-205ENST00000474996 ADCY10Q96PN6 1610 aa25.07■■□□□ 1.6
COL2A1-205ENST00000474996 NPM1P06748 294 aaKnown RBP eCLIP25.05■■□□□ 1.6
COL2A1-205ENST00000474996 CARMIL1Q5VZK9 1371 aa25.04■■□□□ 1.6
COL2A1-205ENST00000474996 MAPKBP1O60336 1514 aa25.02■■□□□ 1.6
COL2A1-205ENST00000474996 ABCC10Q5T3U5 1492 aa25.02■■□□□ 1.6
COL2A1-205ENST00000474996 FAM69CQ0P6D2 419 aa25■■□□□ 1.59
COL2A1-205ENST00000474996 DIP2BQ9P265 1576 aa24.97■■□□□ 1.59
COL2A1-205ENST00000474996 PTPRGP23470 1445 aa24.93■■□□□ 1.58
COL2A1-205ENST00000474996 TTBK1Q5TCY1 1321 aaPredicted RBP24.91■■□□□ 1.58
COL2A1-205ENST00000474996 IQGAP2Q13576 1575 aa24.9■■□□□ 1.58
COL2A1-205ENST00000474996 CARMIL2Q6F5E8 1435 aa24.89■■□□□ 1.58
COL2A1-205ENST00000474996 TNIKQ9UKE5 1360 aa24.88■■□□□ 1.57
COL2A1-205ENST00000474996 TSPOAP1O95153 1857 aa24.83■■□□□ 1.57
COL2A1-205ENST00000474996 RAPGEF2Q9Y4G8 1499 aa24.8■■□□□ 1.56
COL2A1-205ENST00000474996 ABCC2Q92887 1545 aa24.8■■□□□ 1.56
COL2A1-205ENST00000474996 DISP1Q96F81 1524 aa24.79■■□□□ 1.56
COL2A1-205ENST00000474996 KDM6BO15054 1643 aa24.77■■□□□ 1.56
COL2A1-205ENST00000474996 UHRF1BP1LA0JNW5 1464 aa24.74■■□□□ 1.55
COL2A1-205ENST00000474996 UGGT2Q9NYU1 1516 aa24.74■■□□□ 1.55
COL2A1-205ENST00000474996 UACAQ9BZF9 1416 aa24.73■■□□□ 1.55
COL2A1-205ENST00000474996 ASXL2Q76L83 1435 aa24.72■■□□□ 1.55
COL2A1-205ENST00000474996 PLB1Q6P1J6 1458 aa24.7■■□□□ 1.55
COL2A1-205ENST00000474996 KIAA0556O60303 1618 aa24.69■■□□□ 1.54
COL2A1-205ENST00000474996 GLI2P10070 1586 aa24.66■■□□□ 1.54
COL2A1-205ENST00000474996 PPRC1Q5VV67 1664 aaKnown RBP24.64■■□□□ 1.53
COL2A1-205ENST00000474996 CTTNBP2Q8WZ74 1663 aa24.64■■□□□ 1.53
COL2A1-205ENST00000474996 KDM5BQ9UGL1 1544 aa24.63■■□□□ 1.53
COL2A1-205ENST00000474996 ZCCHC11Q5TAX3 1644 aaKnown RBP24.61■■□□□ 1.53
COL2A1-205ENST00000474996 EPRSP07814 1512 aaKnown RBP24.58■■□□□ 1.53
COL2A1-205ENST00000474996 MAP3K4Q9Y6R4 1608 aa24.54■■□□□ 1.52
COL2A1-205ENST00000474996 KDM4FA0A1W2PPD8 638 aa24.54■■□□□ 1.52
COL2A1-205ENST00000474996 PRXQ9BXM0 1461 aa24.53■■□□□ 1.52
COL2A1-205ENST00000474996 GOLGA3Q08378 1498 aa24.52■■□□□ 1.52
COL2A1-205ENST00000474996 WDR7Q9Y4E6 1490 aa24.47■■□□□ 1.51
COL2A1-205ENST00000474996 ABCA8O94911 1581 aa24.46■■□□□ 1.51
COL2A1-205ENST00000474996 COL17A1Q9UMD9 1497 aaPredicted RBP24.46■■□□□ 1.51
COL2A1-205ENST00000474996 TEX14Q8IWB6 1497 aa24.45■■□□□ 1.51
COL2A1-205ENST00000474996 KCNH8Q96L42 1107 aa24.35■■□□□ 1.49
COL2A1-205ENST00000474996 CFAP43Q8NDM7 1665 aa24.34■■□□□ 1.49
COL2A1-205ENST00000474996 ADGRL1O94910 1474 aa24.34■■□□□ 1.49
COL2A1-205ENST00000474996 P3H3Q8IVL6 736 aa24.34■■□□□ 1.49
COL2A1-205ENST00000474996 CD109Q6YHK3 1445 aa24.34■■□□□ 1.49
COL2A1-205ENST00000474996 CSRNP3Q8WYN3 585 aa24.32■■□□□ 1.48
COL2A1-205ENST00000474996 MAGI3Q5TCQ9 1506 aa24.31■■□□□ 1.48
COL2A1-205ENST00000474996 ARID3CA6NKF2 412 aa24.29■■□□□ 1.48
COL2A1-205ENST00000474996 FAM9AQ8IZU1 332 aaPredicted RBP24.28■■□□□ 1.48
COL2A1-205ENST00000474996 SAMD9Q5K651 1589 aa24.27■■□□□ 1.48
COL2A1-205ENST00000474996 ATP10BO94823 1461 aa24.26■■□□□ 1.47
COL2A1-205ENST00000474996 RAPGEF6Q8TEU7 1601 aa24.2■■□□□ 1.46
COL2A1-205ENST00000474996 EEA1Q15075 1411 aa24.19■■□□□ 1.46
COL2A1-205ENST00000474996 ABCA9Q8IUA7 1624 aa24.15■■□□□ 1.46
COL2A1-205ENST00000474996 RANGAP1P46060 587 aaPredicted RBP24.15■■□□□ 1.46
COL2A1-205ENST00000474996 ARAP3Q8WWN8 1544 aa24.12■■□□□ 1.45
COL2A1-205ENST00000474996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.11■■□□□ 1.45
COL2A1-205ENST00000474996 HNRNPUL2Q1KMD3 747 aaKnown RBP24.11■■□□□ 1.45
COL2A1-205ENST00000474996 FHOD3Q2V2M9 1422 aa24.1■■□□□ 1.45
COL2A1-205ENST00000474996 NUP153P49790 1475 aaKnown RBP24.1■■□□□ 1.45
COL2A1-205ENST00000474996 KIF21BO75037 1637 aa24.1■■□□□ 1.45
COL2A1-205ENST00000474996 PHLDB1Q86UU1 1377 aa24.04■■□□□ 1.44
COL2A1-205ENST00000474996 HECW2Q9P2P5 1572 aa24.03■■□□□ 1.44
COL2A1-205ENST00000474996 NEO1Q92859 1461 aa24.01■■□□□ 1.43
COL2A1-205ENST00000474996 EFCAB5A4FU69 1503 aa24■■□□□ 1.43
COL2A1-205ENST00000474996 RAPGEF3O95398 923 aa23.99■■□□□ 1.43
COL2A1-205ENST00000474996 PLEKHD1A6NEE1 506 aa23.96■■□□□ 1.43
COL2A1-205ENST00000474996 FRMPD1Q5SYB0 1578 aa23.95■■□□□ 1.42
COL2A1-205ENST00000474996 EHMT2Q96KQ7 1210 aa23.91■■□□□ 1.42
COL2A1-205ENST00000474996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.89■■□□□ 1.42
COL2A1-205ENST00000474996 ADAMTSL3P82987 1691 aa23.89■■□□□ 1.41
COL2A1-205ENST00000474996 CDK13Q14004 1512 aaKnown RBP23.87■■□□□ 1.41
COL2A1-205ENST00000474996 TTC37Q6PGP7 1564 aa23.86■■□□□ 1.41
COL2A1-205ENST00000474996 UBTFP17480 764 aaKnown RBP23.86■■□□□ 1.41
COL2A1-205ENST00000474996 ILDR1Q86SU0 546 aaPredicted RBP23.86■■□□□ 1.41
COL2A1-205ENST00000474996 RICTORQ6R327 1708 aa23.86■■□□□ 1.41
COL2A1-205ENST00000474996 FANCAO15360 1455 aa23.86■■□□□ 1.41
COL2A1-205ENST00000474996 AKNAQ7Z591 1439 aa23.85■■□□□ 1.41
COL2A1-205ENST00000474996 DENND4BO75064 1496 aaPredicted RBP23.85■■□□□ 1.41
COL2A1-205ENST00000474996 CFAP74Q9C0B2 1584 aa23.85■■□□□ 1.41
COL2A1-205ENST00000474996 PTPRMP28827 1452 aa23.83■■□□□ 1.41
COL2A1-205ENST00000474996 BCORL1Q5H9F3 1711 aa23.83■■□□□ 1.41
COL2A1-205ENST00000474996 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
COL2A1-205ENST00000474996 ARID4BQ4LE39 1312 aaPredicted RBP23.82■■□□□ 1.4
COL2A1-205ENST00000474996 ARHGEF40Q8TER5 1519 aa23.81■■□□□ 1.4
COL2A1-205ENST00000474996 MADDQ8WXG6 1647 aa23.79■■□□□ 1.4
COL2A1-205ENST00000474996 ARHGAP35Q9NRY4 1499 aa23.79■■□□□ 1.4
COL2A1-205ENST00000474996 FMN1Q68DA7 1419 aa23.78■■□□□ 1.4
COL2A1-205ENST00000474996 ATP1B4Q9UN42 357 aaPredicted RBP23.78■■□□□ 1.4
COL2A1-205ENST00000474996 HECW1Q76N89 1606 aa23.77■■□□□ 1.4
COL2A1-205ENST00000474996 ZMYM4Q5VZL5 1548 aa23.74■■□□□ 1.39
COL2A1-205ENST00000474996 PLCH2O75038 1416 aa23.73■■□□□ 1.39
COL2A1-205ENST00000474996 ZFYVE16Q7Z3T8 1539 aa23.71■■□□□ 1.39
COL2A1-205ENST00000474996 YEATS2Q9ULM3 1422 aa23.71■■□□□ 1.39
COL2A1-205ENST00000474996 RIMS1Q86UR5 1692 aaKnown RBP23.7■■□□□ 1.39
COL2A1-205ENST00000474996 SIGLEC1Q9BZZ2 1709 aa23.69■■□□□ 1.38
COL2A1-205ENST00000474996 MYO5CQ9NQX4 1742 aa23.69■■□□□ 1.38
COL2A1-205ENST00000474996 SCAPERQ9BY12 1400 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms