RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 ZBTB22O15209 634 aa15.77■□□□□ 0.12
DDX39B-217ENST00000474961 CACNB1Q02641 598 aaPredicted RBP15.77■□□□□ 0.12
DDX39B-217ENST00000474961 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
DDX39B-217ENST00000474961 TDRD9Q8NDG6 1382 aaKnown RBP15.76■□□□□ 0.11
DDX39B-217ENST00000474961 FAM9AQ8IZU1 332 aaPredicted RBP15.76■□□□□ 0.11
DDX39B-217ENST00000474961 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
DDX39B-217ENST00000474961 EEA1Q15075 1411 aa15.75■□□□□ 0.11
DDX39B-217ENST00000474961 APLP2Q06481 763 aa15.74■□□□□ 0.11
DDX39B-217ENST00000474961 AQRO60306 1485 aaKnown RBP eCLIP15.73■□□□□ 0.117e-15■■■■■ 31.3
DDX39B-217ENST00000474961 GAPVD1Q14C86 1478 aa15.73■□□□□ 0.11
DDX39B-217ENST00000474961 EIF4G3O43432 1585 aaKnown RBP15.73■□□□□ 0.11
DDX39B-217ENST00000474961 SAMD1Q6SPF0 538 aaPredicted RBP15.72■□□□□ 0.11
DDX39B-217ENST00000474961 PBRM1Q86U86 1689 aa15.71■□□□□ 0.11
DDX39B-217ENST00000474961 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
DDX39B-217ENST00000474961 IGF1RP08069 1367 aa15.67■□□□□ 0.1
DDX39B-217ENST00000474961 GRIN2BQ13224 1484 aa15.66■□□□□ 0.1
DDX39B-217ENST00000474961 ERICH3Q5RHP9 1530 aa15.66■□□□□ 0.1
DDX39B-217ENST00000474961 CUL7Q14999 1698 aa15.61■□□□□ 0.09
DDX39B-217ENST00000474961 CARMIL1Q5VZK9 1371 aa15.6■□□□□ 0.09
DDX39B-217ENST00000474961 SNAPC4Q5SXM2 1469 aa15.59■□□□□ 0.09
DDX39B-217ENST00000474961 PRXQ9BXM0 1461 aa15.58■□□□□ 0.08
DDX39B-217ENST00000474961 ADAMTS12P58397 1594 aa15.58■□□□□ 0.08
DDX39B-217ENST00000474961 KIF21BO75037 1637 aa15.57■□□□□ 0.08
DDX39B-217ENST00000474961 MAGI1Q96QZ7 1491 aaPredicted RBP15.57■□□□□ 0.08
DDX39B-217ENST00000474961 FHAD1B1AJZ9 1412 aa15.55■□□□□ 0.08
DDX39B-217ENST00000474961 RAPGEF2Q9Y4G8 1499 aa15.54■□□□□ 0.08
DDX39B-217ENST00000474961 LOC105371045A0A1W2PR82 267 aa15.52■□□□□ 0.08
DDX39B-217ENST00000474961 CAPN15O75808 1086 aa15.52■□□□□ 0.08
DDX39B-217ENST00000474961 SYNJ2O15056 1496 aa15.51■□□□□ 0.07
DDX39B-217ENST00000474961 GOLGA3Q08378 1498 aa15.51■□□□□ 0.07
DDX39B-217ENST00000474961 CHD1O14646 1710 aa15.49■□□□□ 0.07
DDX39B-217ENST00000474961 CHMP7Q8WUX9 453 aaPredicted RBP15.48■□□□□ 0.07
DDX39B-217ENST00000474961 FBLN2P98095 1184 aa15.47■□□□□ 0.07
DDX39B-217ENST00000474961 GRIN2AQ12879 1464 aa15.46■□□□□ 0.07
DDX39B-217ENST00000474961 ATXN8OSP0DMR3 200 aa15.46■□□□□ 0.07
DDX39B-217ENST00000474961 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.07
DDX39B-217ENST00000474961 UBTFP17480 764 aaKnown RBP15.45■□□□□ 0.06
DDX39B-217ENST00000474961 ZNF219Q9P2Y4 722 aaPredicted RBP15.43■□□□□ 0.06
DDX39B-217ENST00000474961 CTTNBP2Q8WZ74 1663 aa15.41■□□□□ 0.06
DDX39B-217ENST00000474961 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
DDX39B-217ENST00000474961 TNIKQ9UKE5 1360 aa15.39■□□□□ 0.05
DDX39B-217ENST00000474961 CEP170Q5SW79 1584 aa15.38■□□□□ 0.05
DDX39B-217ENST00000474961 NUP160Q12769 1436 aa15.37■□□□□ 0.05
DDX39B-217ENST00000474961 KIAA0586Q9BVV6 1533 aa15.33■□□□□ 0.05
DDX39B-217ENST00000474961 IQGAP2Q13576 1575 aa15.32■□□□□ 0.04
DDX39B-217ENST00000474961 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
DDX39B-217ENST00000474961 CLASP1Q7Z460 1538 aa15.28■□□□□ 0.04
DDX39B-217ENST00000474961 RANGAP1P46060 587 aaPredicted RBP15.28■□□□□ 0.04
DDX39B-217ENST00000474961 CEP162Q5TB80 1403 aa15.27■□□□□ 0.04
DDX39B-217ENST00000474961 ATF5Q9Y2D1 282 aaPredicted RBP15.27■□□□□ 0.04
DDX39B-217ENST00000474961 UGGT2Q9NYU1 1516 aa15.24■□□□□ 0.03
DDX39B-217ENST00000474961 JPH4Q96JJ6 628 aa15.24■□□□□ 0.03
DDX39B-217ENST00000474961 CLIP1P30622 1438 aa15.24■□□□□ 0.03
DDX39B-217ENST00000474961 SHROOM2Q13796 1616 aa15.22■□□□□ 0.03
DDX39B-217ENST00000474961 DSG3P32926 999 aa15.21■□□□□ 0.03
DDX39B-217ENST00000474961 ARHGAP35Q9NRY4 1499 aa15.2■□□□□ 0.02
DDX39B-217ENST00000474961 SAMD9Q5K651 1589 aa15.2■□□□□ 0.02
DDX39B-217ENST00000474961 EFCAB5A4FU69 1503 aa15.2■□□□□ 0.02
DDX39B-217ENST00000474961 P3H3Q8IVL6 736 aa15.18■□□□□ 0.02
DDX39B-217ENST00000474961 DISP1Q96F81 1524 aa15.17■□□□□ 0.02
DDX39B-217ENST00000474961 KIAA0556O60303 1618 aa15.17■□□□□ 0.02
DDX39B-217ENST00000474961 PRG4Q92954 1404 aaPredicted RBP15.17■□□□□ 0.02
DDX39B-217ENST00000474961 ABCB7O75027 752 aa15.15■□□□□ 0.02
DDX39B-217ENST00000474961 CARMIL2Q6F5E8 1435 aa15.15■□□□□ 0.02
DDX39B-217ENST00000474961 ARAP1Q96P48 1450 aa15.14■□□□□ 0.01
DDX39B-217ENST00000474961 FHOD3Q2V2M9 1422 aa15.14■□□□□ 0.01
DDX39B-217ENST00000474961 ERCC6L2Q5T890 1561 aa15.13■□□□□ 0.01
DDX39B-217ENST00000474961 POLA2Q14181 598 aa15.12■□□□□ 0.01
DDX39B-217ENST00000474961 TTBK1Q5TCY1 1321 aaPredicted RBP15.06■□□□□ 0
DDX39B-217ENST00000474961 VPS8Q8N3P4 1428 aa15.06■□□□□ 0
DDX39B-217ENST00000474961 FMN1Q68DA7 1419 aa15.05■□□□□ -0
DDX39B-217ENST00000474961 PTPRGP23470 1445 aa15.04■□□□□ -0
DDX39B-217ENST00000474961 ARHGEF11O15085 1522 aa15.03■□□□□ -0
DDX39B-217ENST00000474961 RIMBP3CA6NJZ7 1639 aa15.02□□□□□ -0.01
DDX39B-217ENST00000474961 RIMBP3BA6NNM3 1639 aa15.02□□□□□ -0.01
DDX39B-217ENST00000474961 RIMBP3Q9UFD9 1639 aa15.02□□□□□ -0.01
DDX39B-217ENST00000474961 PCF11O94913 1555 aaKnown RBP15.01□□□□□ -0.01
DDX39B-217ENST00000474961 CASKIN1Q8WXD9 1431 aa14.99□□□□□ -0.01
DDX39B-217ENST00000474961 RAPGEF6Q8TEU7 1601 aa14.99□□□□□ -0.01
DDX39B-217ENST00000474961 ABCA8O94911 1581 aa14.98□□□□□ -0.01
DDX39B-217ENST00000474961 PLB1Q6P1J6 1458 aa14.97□□□□□ -0.01
DDX39B-217ENST00000474961 FYCO1Q9BQS8 1478 aa14.96□□□□□ -0.01
DDX39B-217ENST00000474961 ATP1B4Q9UN42 357 aaPredicted RBP14.96□□□□□ -0.01
DDX39B-217ENST00000474961 LRRIQ1Q96JM4 1722 aa14.95□□□□□ -0.02
DDX39B-217ENST00000474961 ZBTB12Q9Y330 459 aaPredicted RBP14.95□□□□□ -0.02
DDX39B-217ENST00000474961 HECW1Q76N89 1606 aa14.95□□□□□ -0.02
DDX39B-217ENST00000474961 UACAQ9BZF9 1416 aa14.94□□□□□ -0.02
DDX39B-217ENST00000474961 NUP153P49790 1475 aaKnown RBP14.92□□□□□ -0.02
DDX39B-217ENST00000474961 ABCC2Q92887 1545 aa14.92□□□□□ -0.02
DDX39B-217ENST00000474961 UHRF1BP1LA0JNW5 1464 aa14.91□□□□□ -0.02
DDX39B-217ENST00000474961 ADCY10Q96PN6 1610 aa14.89□□□□□ -0.03
DDX39B-217ENST00000474961 EPRSP07814 1512 aaKnown RBP14.89□□□□□ -0.03
DDX39B-217ENST00000474961 CYB5RLQ6IPT4 315 aa14.89□□□□□ -0.03
DDX39B-217ENST00000474961 CFAP43Q8NDM7 1665 aa14.89□□□□□ -0.03
DDX39B-217ENST00000474961 ARID3CA6NKF2 412 aa14.88□□□□□ -0.03
DDX39B-217ENST00000474961 CCDC18Q5T9S5 1454 aa14.88□□□□□ -0.03
DDX39B-217ENST00000474961 MAP3K1Q13233 1512 aa14.87□□□□□ -0.03
DDX39B-217ENST00000474961 CDK13Q14004 1512 aaKnown RBP14.87□□□□□ -0.03
DDX39B-217ENST00000474961 TIAM1Q13009 1591 aa14.87□□□□□ -0.03
DDX39B-217ENST00000474961 ATP10BO94823 1461 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms