RNA–Protein interactions for RNA: ENST00000474528.5

SFXN5-211, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 4,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-211ENST00000474528 FHOD3Q2V2M9 1422 aa16.56■□□□□ 0.24
SFXN5-211ENST00000474528 NESP48681 1621 aa16.55■□□□□ 0.24
SFXN5-211ENST00000474528 NEFLP07196 543 aa16.54■□□□□ 0.24
SFXN5-211ENST00000474528 CFTRP13569 1480 aa16.53■□□□□ 0.24
SFXN5-211ENST00000474528 TONSLQ96HA7 1378 aa16.52■□□□□ 0.24
SFXN5-211ENST00000474528 BCANQ96GW7 911 aa16.52■□□□□ 0.24
SFXN5-211ENST00000474528 CUX1P39880 1505 aa16.52■□□□□ 0.24
SFXN5-211ENST00000474528 CDK11AQ9UQ88 783 aaPredicted RBP16.51■□□□□ 0.23
SFXN5-211ENST00000474528 KIF21BO75037 1637 aa16.5■□□□□ 0.23
SFXN5-211ENST00000474528 PDS5BQ9NTI5 1447 aa16.48■□□□□ 0.23
SFXN5-211ENST00000474528 ANP32CO43423 234 aa16.47■□□□□ 0.23
SFXN5-211ENST00000474528 FHAD1B1AJZ9 1412 aa16.47■□□□□ 0.23
SFXN5-211ENST00000474528 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
SFXN5-211ENST00000474528 CC2D2AQ9P2K1 1620 aa16.46■□□□□ 0.23
SFXN5-211ENST00000474528 ARAP1Q96P48 1450 aa16.45■□□□□ 0.22
SFXN5-211ENST00000474528 TOP2BQ02880 1626 aa16.45■□□□□ 0.22
SFXN5-211ENST00000474528 PEG3Q9GZU2 1588 aa16.45■□□□□ 0.22
SFXN5-211ENST00000474528 HMGXB3Q12766 1538 aa16.43■□□□□ 0.22
SFXN5-211ENST00000474528 RAB3GAP2Q9H2M9 1393 aa16.42■□□□□ 0.22
SFXN5-211ENST00000474528 PRXQ9BXM0 1461 aa16.41■□□□□ 0.22
SFXN5-211ENST00000474528 ARHGAP35Q9NRY4 1499 aa16.36■□□□□ 0.21
SFXN5-211ENST00000474528 FOXD1Q16676 465 aa16.35■□□□□ 0.21
SFXN5-211ENST00000474528 DHX57Q6P158 1386 aaKnown RBP16.35■□□□□ 0.21
SFXN5-211ENST00000474528 KCNH8Q96L42 1107 aa16.35■□□□□ 0.21
SFXN5-211ENST00000474528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.35■□□□□ 0.21
SFXN5-211ENST00000474528 SETD5Q9C0A6 1442 aa16.34■□□□□ 0.21
SFXN5-211ENST00000474528 SLC4A1APQ9BWU0 796 aaKnown RBP16.34■□□□□ 0.21
SFXN5-211ENST00000474528 CFDP1Q9UEE9 299 aaPredicted RBP16.33■□□□□ 0.21
SFXN5-211ENST00000474528 KDM2AQ9Y2K7 1162 aa16.31■□□□□ 0.2
SFXN5-211ENST00000474528 AQRO60306 1485 aaKnown RBP eCLIP16.3■□□□□ 0.22e-7■■■■□ 22.1
SFXN5-211ENST00000474528 PLEKHD1A6NEE1 506 aa16.3■□□□□ 0.2
SFXN5-211ENST00000474528 CLSPNQ9HAW4 1339 aa16.29■□□□□ 0.2
SFXN5-211ENST00000474528 PHLDB1Q86UU1 1377 aa16.29■□□□□ 0.2
SFXN5-211ENST00000474528 FMN1Q68DA7 1419 aa16.28■□□□□ 0.2
SFXN5-211ENST00000474528 GAPVD1Q14C86 1478 aa16.28■□□□□ 0.2
SFXN5-211ENST00000474528 TSPY4P0CV99 314 aa16.28■□□□□ 0.2
SFXN5-211ENST00000474528 TSPY10P0CW01 314 aa16.28■□□□□ 0.2
SFXN5-211ENST00000474528 ERICH3Q5RHP9 1530 aa16.27■□□□□ 0.2
SFXN5-211ENST00000474528 POLA1P09884 1462 aaPredicted RBP16.27■□□□□ 0.2
SFXN5-211ENST00000474528 SENP3-EIF4A1A0A087X0R7 540 aa16.26■□□□□ 0.19
SFXN5-211ENST00000474528 TOPBP1Q92547 1522 aa16.26■□□□□ 0.19
SFXN5-211ENST00000474528 FAM9BQ8IZU0 186 aa16.22■□□□□ 0.19
SFXN5-211ENST00000474528 HNRNPUQ00839 825 aaKnown RBP eCLIP16.22■□□□□ 0.191e-6■■□□□ 12
SFXN5-211ENST00000474528 FKBP8Q14318 412 aa16.19■□□□□ 0.18
SFXN5-211ENST00000474528 RGL3Q3MIN7 710 aa16.18■□□□□ 0.18
SFXN5-211ENST00000474528 LRRC9Q6ZRR7 1453 aa16.17■□□□□ 0.18
SFXN5-211ENST00000474528 EIF4G2P78344 907 aaKnown RBP eCLIP16.17■□□□□ 0.18
SFXN5-211ENST00000474528 JPH4Q96JJ6 628 aa16.15■□□□□ 0.18
SFXN5-211ENST00000474528 BIVM-ERCC5R4GMW8 1640 aa16.14■□□□□ 0.17
SFXN5-211ENST00000474528 ZNF644Q9H582 1327 aaPredicted RBP16.13■□□□□ 0.17
SFXN5-211ENST00000474528 PPP1R15AO75807 674 aaPredicted RBP16.13■□□□□ 0.17
SFXN5-211ENST00000474528 IRX6P78412 446 aaPredicted RBP16.13■□□□□ 0.17
SFXN5-211ENST00000474528 SENP3Q9H4L4 574 aaPredicted RBP16.12■□□□□ 0.17
SFXN5-211ENST00000474528 SALL2Q9Y467 1007 aaPredicted RBP16.11■□□□□ 0.17
SFXN5-211ENST00000474528 MPHOSPH9Q99550 1183 aa16.11■□□□□ 0.17
SFXN5-211ENST00000474528 DNMBPQ6XZF7 1577 aa16.1■□□□□ 0.17
SFXN5-211ENST00000474528 RRBP1Q9P2E9 1410 aaKnown RBP16.09■□□□□ 0.17
SFXN5-211ENST00000474528 CHGAP10645 457 aaKnown RBP16.09■□□□□ 0.17
SFXN5-211ENST00000474528 MRS2Q9HD23 443 aa16.09■□□□□ 0.17
SFXN5-211ENST00000474528 ERICH6Q7L0X2 663 aa16.08■□□□□ 0.16
SFXN5-211ENST00000474528 URB2Q14146 1524 aaKnown RBP16.07■□□□□ 0.16
SFXN5-211ENST00000474528 FGD6Q6ZV73 1430 aa16.06■□□□□ 0.16
SFXN5-211ENST00000474528 HSPA5P11021 654 aaKnown RBP16.06■□□□□ 0.16
SFXN5-211ENST00000474528 CASKIN1Q8WXD9 1431 aa16.06■□□□□ 0.16
SFXN5-211ENST00000474528 ABCA10Q8WWZ4 1543 aa16.05■□□□□ 0.16
SFXN5-211ENST00000474528 HNRNPMP52272 730 aaKnown RBP eCLIP16.05■□□□□ 0.16
SFXN5-211ENST00000474528 PKD2Q13563 968 aa16.04■□□□□ 0.16
SFXN5-211ENST00000474528 L3MBTL2Q969R5 705 aa16.04■□□□□ 0.16
SFXN5-211ENST00000474528 TIAM1Q13009 1591 aa16.03■□□□□ 0.16
SFXN5-211ENST00000474528 CARMIL2Q6F5E8 1435 aa16.02■□□□□ 0.16
SFXN5-211ENST00000474528 CCDC18Q5T9S5 1454 aa16.01■□□□□ 0.15
SFXN5-211ENST00000474528 NPM1P06748 294 aaKnown RBP eCLIP16.01■□□□□ 0.15
SFXN5-211ENST00000474528 NCOA2Q15596 1464 aa16■□□□□ 0.15
SFXN5-211ENST00000474528 TIMELESSQ9UNS1 1208 aa15.99■□□□□ 0.15
SFXN5-211ENST00000474528 CARD11Q9BXL7 1154 aa15.99■□□□□ 0.15
SFXN5-211ENST00000474528 PCF11O94913 1555 aaKnown RBP15.98■□□□□ 0.15
SFXN5-211ENST00000474528 MYOM3Q5VTT5 1437 aa15.98■□□□□ 0.15
SFXN5-211ENST00000474528 DCAF11Q8TEB1 546 aa15.98■□□□□ 0.15
SFXN5-211ENST00000474528 FYCO1Q9BQS8 1478 aa15.97■□□□□ 0.15
SFXN5-211ENST00000474528 GRIN2BQ13224 1484 aa15.97■□□□□ 0.15
SFXN5-211ENST00000474528 TMC1Q8TDI8 760 aa15.96■□□□□ 0.15
SFXN5-211ENST00000474528 MRC2Q9UBG0 1479 aa15.95■□□□□ 0.14
SFXN5-211ENST00000474528 NUP155O75694 1391 aa15.94■□□□□ 0.14
SFXN5-211ENST00000474528 LAMC3Q9Y6N6 1575 aa15.94■□□□□ 0.14
SFXN5-211ENST00000474528 ZNF608Q9ULD9 1512 aaPredicted RBP15.93■□□□□ 0.14
SFXN5-211ENST00000474528 PRDM2Q13029 1718 aa15.93■□□□□ 0.14
SFXN5-211ENST00000474528 SUPT16HQ9Y5B9 1047 aaKnown RBP15.92■□□□□ 0.14
SFXN5-211ENST00000474528 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
SFXN5-211ENST00000474528 CDK13Q14004 1512 aaKnown RBP15.9■□□□□ 0.14
SFXN5-211ENST00000474528 EFCAB5A4FU69 1503 aa15.89■□□□□ 0.13
SFXN5-211ENST00000474528 PTPRGP23470 1445 aa15.87■□□□□ 0.13
SFXN5-211ENST00000474528 ANKRD30AQ9BXX3 1397 aa15.86■□□□□ 0.13
SFXN5-211ENST00000474528 PLPPR3Q6T4P5 718 aa15.86■□□□□ 0.13
SFXN5-211ENST00000474528 PRG4Q92954 1404 aaPredicted RBP15.86■□□□□ 0.13
SFXN5-211ENST00000474528 UACAQ9BZF9 1416 aa15.84■□□□□ 0.13
SFXN5-211ENST00000474528 IFT140Q96RY7 1462 aa15.83■□□□□ 0.13
SFXN5-211ENST00000474528 WDR97A6NE52 1622 aa15.8■□□□□ 0.12
SFXN5-211ENST00000474528 CUL7Q14999 1698 aa15.8■□□□□ 0.12
SFXN5-211ENST00000474528 EPRSP07814 1512 aaKnown RBP15.79■□□□□ 0.12
SFXN5-211ENST00000474528 CC2D1BQ5T0F9 858 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms